-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_184

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 2624, 2762
Couldn't classify 5274, 5361
Sorry, prediction snap_scaffold_184-snap.2-T1 fails validation.
(GCA)	 AG	2624-2762	GT	ATG
(AAG)	 AG	5274-5361	GT	ACG
-recovered snap_scaffold_184-snap.2-T1, internal, 2624, 2762
-recovered snap_scaffold_184-snap.2-T1, internal, 5274, 5361

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 8772, 8976
Sorry, prediction snap_scaffold_184-snap.1-T1 fails validation.
(ATG)	 AG	7142-7145	GT	GGG
(CTC)	 AG	8650-8742	GT	GGG
(GAG)	 AG	8772-8976	GT	ATG
-recovered snap_scaffold_184-snap.1-T1, initial, 7142, 7145
-recovered snap_scaffold_184-snap.1-T1, internal, 7142, 7145
-recovered snap_scaffold_184-snap.1-T1, internal, 8650, 8742
-recovered snap_scaffold_184-snap.1-T1, internal, 8772, 8976
Valid prediction for GlimmerHMM_glimmerT_59971-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 3010, rend_intergenic: 2624  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 10151
-exon list size: 14


building trellis

6.2    
12.5    
18.8    
25.0    
31.2    
37.5    
43.8    
50.0    
56.2    
62.5    
68.8    
75.0    
81.2    
87.5    
93.8    
-found 1 predictions from path traversal
Error with prediction: snap lend_intergenic: 3010, rend_intergenic: 2624  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support