-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_1839

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 799, 1136
Couldn't classify 1401, 1519
Sorry, prediction snap_scaffold_1839-snap.1-T1 fails validation.
(TTT)	 AG	799-1136	GT	GGG
(CAT)	 AG	1401-1519	GT	AGG
-recovered snap_scaffold_1839-snap.1-T1, internal, 799, 1136
-recovered snap_scaffold_1839-snap.1-T1, internal, 1401, 1519

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 1048, 1104
Couldn't classify 1821, 1884
Sorry, prediction Augustus_model.g40664.t1 fails validation.
(CCC)	 AG	1048-1104	GT	AGG
(TGG)	 AG	1821-1884		TG
-recovered Augustus_model.g40664.t1, internal, 1048, 1104

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 1884
-exon list size: 5


building trellis

14.3    
28.6    
42.9    
57.1    
71.4    
85.7    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support