-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_182

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for Augustus_model.g39717.t1
Couldn't classify 7809, 7947
Sorry, prediction snap_scaffold_182-snap.1-T1 fails validation.
(ATG)	 GT	3619-3622	GT	GAG
(GCG)	 AG	6323-6412	GT	TGG
(ACC)	 AG	6957-7216	GT	AGG
(CGT)	 AG	7499-7633	GT	AGG
(GAG)	 AG	7809-7947	GT	AGG
-recovered snap_scaffold_182-snap.1-T1, initial, 3619, 3622
-recovered snap_scaffold_182-snap.1-T1, internal, 6323, 6412
-recovered snap_scaffold_182-snap.1-T1, internal, 6957, 7216
-recovered snap_scaffold_182-snap.1-T1, internal, 7499, 7633
-recovered snap_scaffold_182-snap.1-T1, internal, 7809, 7947
Valid prediction for GlimmerHMM_glimmerT_59967-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_182-snap.2-T1
Valid prediction for GlimmerHMM_glimmerT_59968-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 7947, rend_intergenic: 6513  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 10388
-exon list size: 16


building trellis

5.6    
11.1    
16.7    
22.2    
27.8    
33.3    
38.9    
44.4    
50.0    
55.6    
61.1    
66.7    
72.2    
77.8    
83.3    
88.9    
94.4    
-found 3 predictions from path traversal
Error with prediction: snap lend_intergenic: 7947, rend_intergenic: 6513  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 3 predictions persist after filtering for low support