-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_18/scaffold_18_4413342-4633330 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for GlimmerHMM_glimmerT_42190-T1 Valid prediction for snap_scaffold_18-snap.934-T1 Valid prediction for Augustus_model.g28087.t1 Couldn't classify 5309, 5442 Sorry, prediction pasa_asmbl_21120.p1 fails validation. (ATG) TG 4603-4739 GT ATG (GTC) AG 4844-4902 GT CGG (AAC) AG 5001-5132 GT TGG (GTA) AG 5309-5442 CC CCC -recovered pasa_asmbl_21120.p1, initial, 4603, 4739 -recovered pasa_asmbl_21120.p1, internal, 4844, 4902 -recovered pasa_asmbl_21120.p1, internal, 5001, 5132 Valid prediction for Augustus_model.g28097.t1 Valid prediction for GlimmerHMM_glimmerT_42167-T1 Valid prediction for GlimmerHMM_glimmerT_42157-T1 Valid prediction for Augustus_model.g28091.t1 Valid prediction for Augustus_model.g28076.t1 Couldn't classify 64864, 65023 Couldn't classify 65464, 65499 Sorry, prediction pasa_asmbl_21084.p1 fails validation. (CCG) CC 64864-65023 GT GGG (TGA) AG 65135-65325 GT AGG (TCG) AG 65464-65499 CA GGC -recovered pasa_asmbl_21084.p1, internal, 65135, 65325 Valid prediction for HiQ_model.g28093.t1 Valid prediction for HiQ_model.g28079.t1 Valid prediction for snap_scaffold_18-snap.927-T1 Valid prediction for Augustus_model.g28083.t1 Valid prediction for Augustus_model.g28075.t1 Valid prediction for GlimmerHMM_glimmerT_42159-T1 Valid prediction for pasa_asmbl_20537.p1 Valid prediction for snap_scaffold_18-snap.915-T1 Valid prediction for GlimmerHMM_glimmerT_42172-T1 Valid prediction for GlimmerHMM_glimmerT_42158-T1 Valid prediction for GlimmerHMM_glimmerT_42182-T1 Valid prediction for snap_scaffold_18-snap.926-T1 Valid prediction for snap_scaffold_18-snap.904-T1 Valid prediction for snap_scaffold_18-snap.942-T1 Valid prediction for snap_scaffold_18-snap.947-T1 Valid prediction for pasa_asmbl_20528.p1 Valid prediction for CodingQuarry_transcript_23740-T1 Valid prediction for CodingQuarry_transcript_23741-T1 Valid prediction for Augustus_model.g28089.t1 Valid prediction for GlimmerHMM_glimmerT_42161-T1 Valid prediction for snap_scaffold_18-snap.921-T1 Sorry, intron length (4) is less than minimum required (10) Valid prediction for snap_scaffold_18-snap.909-T1 Couldn't classify 68510, 68767 Sorry, prediction pasa_asmbl_20527.p1 fails validation. (TTC) TG 68510-68767 GT TTG (GTG) AG 68884-68979 GT AGG (GGC) AG 69157-69240 GT AGG (GAG) AG 69324-69461 GT AGG (GCT) AG 69621-69695 GT AGG (GTG) AG 69866-70000 GT CGG (GTG) AG 70106-70306 GT AGG (GTG) AG 70414-70557 AC AGA -recovered pasa_asmbl_20527.p1, terminal, 70414, 70557 -recovered pasa_asmbl_20527.p1, internal, 68884, 68979 -recovered pasa_asmbl_20527.p1, internal, 69157, 69240 -recovered pasa_asmbl_20527.p1, internal, 69324, 69461 -recovered pasa_asmbl_20527.p1, internal, 69621, 69695 -recovered pasa_asmbl_20527.p1, internal, 69866, 70000 -recovered pasa_asmbl_20527.p1, internal, 70106, 70306 Valid prediction for snap_scaffold_18-snap.940-T1 Couldn't classify 63254, 63450 Couldn't classify 63652, 63868 Sorry, prediction pasa_asmbl_20526.p1 fails validation. (GGA) GG 63254-63450 GT GAG (AGA) AG 63652-63868 AG GCA Valid prediction for Augustus_model.g28082.t1 Valid prediction for CodingQuarry_transcript_23735-T1 Valid prediction for snap_scaffold_18-snap.911-T1 Valid prediction for snap_scaffold_18-snap.929-T1 Sorry, intron length (3) is less than minimum required (10) Valid prediction for GlimmerHMM_glimmerT_42188-T1 Valid prediction for GlimmerHMM_glimmerT_42185-T1 Valid prediction for pasa_asmbl_20531.p1 Valid prediction for Augustus_model.g28096.t1 Valid prediction for GlimmerHMM_glimmerT_42156-T1 Valid prediction for snap_scaffold_18-snap.916-T1 Couldn't classify 45718, 45787 Sorry, prediction pasa_asmbl_20523.p1 fails validation. (AGC) AG 45718-45787 GT AGG (AGC) AG 45923-45997 GT TGG (TGC) AG 48058-48192 GT GGG (GTG) AG 48372-48492 GT GAG (TAA) AG 49128-49196 GT AGG (AGT) AG 49274-49380 GT AGG (GTT) AG 49631-49758 GT TGG (TTT) AG 49880-50068 GT GGG (CCC) AG 52132-52364 GT AGG (GGA) AG 53425-53490 GT AAG (TGA) AG 53708-53771 GT AGG (CAT) AG 54067-54138 GT TGG (GGG) AG 54273-54347 GT TGG (ATT) AG 54479-54576 GT CCG (GAT) AG 54951-55077 GT AGG (TTT) AG 55981-56081 GT AGG (TAT) AG 56466-56532 GT TGG (GAA) AG 57039-57143 GT TGG (ATG) AG 57290-57494 GT TGG (ACA) AG 57586-57836 CC AGC -recovered pasa_asmbl_20523.p1, initial, 57290, 57494 add_exon() Sorry, pasa_asmbl_20523.p1 49274-49380-terminal-2 is invalid. -recovered pasa_asmbl_20523.p1, terminal, 49274, 49380 -recovered pasa_asmbl_20523.p1, terminal, 57586, 57836 -recovered pasa_asmbl_20523.p1, internal, 45718, 45787 -recovered pasa_asmbl_20523.p1, internal, 45923, 45997 -recovered pasa_asmbl_20523.p1, internal, 48058, 48192 -recovered pasa_asmbl_20523.p1, internal, 48372, 48492 -recovered pasa_asmbl_20523.p1, internal, 49128, 49196 -recovered pasa_asmbl_20523.p1, internal, 49274, 49380 -recovered pasa_asmbl_20523.p1, internal, 49631, 49758 -recovered pasa_asmbl_20523.p1, internal, 49880, 50068 -recovered pasa_asmbl_20523.p1, internal, 52132, 52364 -recovered pasa_asmbl_20523.p1, internal, 53425, 53490 -recovered pasa_asmbl_20523.p1, internal, 53708, 53771 -recovered pasa_asmbl_20523.p1, internal, 54067, 54138 -recovered pasa_asmbl_20523.p1, internal, 54273, 54347 -recovered pasa_asmbl_20523.p1, internal, 54479, 54576 -recovered pasa_asmbl_20523.p1, internal, 54951, 55077 -recovered pasa_asmbl_20523.p1, internal, 55981, 56081 -recovered pasa_asmbl_20523.p1, internal, 56466, 56532 -recovered pasa_asmbl_20523.p1, internal, 57039, 57143 -recovered pasa_asmbl_20523.p1, internal, 57290, 57494 Valid prediction for HiQ_model.g28099.t1 Valid prediction for GlimmerHMM_glimmerT_42179-T1 Valid prediction for snap_scaffold_18-snap.932-T1 Valid prediction for snap_scaffold_18-snap.908-T1 Valid prediction for GlimmerHMM_glimmerT_42154-T1 Valid prediction for HiQ_model.g28080.t1 Couldn't classify 5734, 5869 Sorry, prediction pasa_asmbl_20517.p1 fails validation. (AGC) CC 5734-5869 GT GGG (GGA) AG 6072-6247 GT AGG (GTG) AG 6448-6519 GT ATG (TGG) AG 6638-6734 GT AGG (AGG) AG 6860-6985 GT AGG (AGC) AG 7068-7165 GT CTG (ATC) AG 7462-7576 GT TGG (ATG) AG 7665-7762 GT AGG (GGC) AG 7994-8067 GT GGG (GAG) AG 8194-8248 GG GAG add_exon() Sorry, pasa_asmbl_20517.p1 7665-7762-initial-1 is invalid. -recovered pasa_asmbl_20517.p1, initial, 7665, 7762 -recovered pasa_asmbl_20517.p1, terminal, 8194, 8248 -recovered pasa_asmbl_20517.p1, internal, 6072, 6247 -recovered pasa_asmbl_20517.p1, internal, 6448, 6519 -recovered pasa_asmbl_20517.p1, internal, 6638, 6734 -recovered pasa_asmbl_20517.p1, internal, 6860, 6985 -recovered pasa_asmbl_20517.p1, internal, 7068, 7165 -recovered pasa_asmbl_20517.p1, internal, 7462, 7576 -recovered pasa_asmbl_20517.p1, internal, 7665, 7762 -recovered pasa_asmbl_20517.p1, internal, 7994, 8067 Valid prediction for GlimmerHMM_glimmerT_42173-T1 Valid prediction for GlimmerHMM_glimmerT_42165-T1 Valid prediction for snap_scaffold_18-snap.903-T1 Valid prediction for snap_scaffold_18-snap.906-T1 Valid prediction for snap_scaffold_18-snap.920-T1 Valid prediction for GlimmerHMM_glimmerT_42191-T1 Valid prediction for Augustus_model.g28078.t1 Valid prediction for snap_scaffold_18-snap.948-T1 Valid prediction for GlimmerHMM_glimmerT_42151-T1 Valid prediction for snap_scaffold_18-snap.937-T1 Valid prediction for GlimmerHMM_glimmerT_42152-T1 Valid prediction for snap_scaffold_18-snap.923-T1 Couldn't classify 28355, 28463 Sorry, prediction pasa_asmbl_20519.p1 fails validation. (ATC) AG 28355-28463 GT AGG (CTG) AG 29452-29595 GT GGG (AGA) AG 30271-30371 GT CTG (GTG) AG 30679-30781 GT AGG (GTT) AG 30941-31035 GT TGG (ATT) AG 31253-31359 GT AGG (GTT) AG 31659-31775 GT GGG (ACT) AG 31884-31947 GT AGG (GTG) AG 33297-33385 GT TGG (TAT) AG 33600-33670 GT AGG (GCA) AG 33921-34015 GT TGG (GCC) AG 34289-34387 GT AGG (GGG) AG 34865-34933 GT AGG (GCC) AG 35086-35164 GT GGG (ACG) AG 36310-36430 GT AGG (GTA) AG 36768-36774 AG AAA -recovered pasa_asmbl_20519.p1, terminal, 36768, 36774 -recovered pasa_asmbl_20519.p1, internal, 28355, 28463 -recovered pasa_asmbl_20519.p1, internal, 29452, 29595 -recovered pasa_asmbl_20519.p1, internal, 30271, 30371 -recovered pasa_asmbl_20519.p1, internal, 30679, 30781 -recovered pasa_asmbl_20519.p1, internal, 30941, 31035 -recovered pasa_asmbl_20519.p1, internal, 31253, 31359 -recovered pasa_asmbl_20519.p1, internal, 31659, 31775 -recovered pasa_asmbl_20519.p1, internal, 31884, 31947 -recovered pasa_asmbl_20519.p1, internal, 33297, 33385 -recovered pasa_asmbl_20519.p1, internal, 33600, 33670 -recovered pasa_asmbl_20519.p1, internal, 33921, 34015 -recovered pasa_asmbl_20519.p1, internal, 34289, 34387 -recovered pasa_asmbl_20519.p1, internal, 34865, 34933 -recovered pasa_asmbl_20519.p1, internal, 35086, 35164 -recovered pasa_asmbl_20519.p1, internal, 36310, 36430 Valid prediction for GlimmerHMM_glimmerT_42187-T1 Valid prediction for GlimmerHMM_glimmerT_42166-T1 Valid prediction for GlimmerHMM_glimmerT_42163-T1 Valid prediction for snap_scaffold_18-snap.912-T1 Valid prediction for snap_scaffold_18-snap.935-T1 Valid prediction for HiQ_model.g28085.t1 Valid prediction for snap_scaffold_18-snap.941-T1 Valid prediction for GlimmerHMM_glimmerT_42175-T1 Valid prediction for snap_scaffold_18-snap.944-T1 Valid prediction for Augustus_model.g28095.t1 Valid prediction for CodingQuarry_transcript_23739-T1 Valid prediction for GlimmerHMM_glimmerT_42170-T1 Valid prediction for GlimmerHMM_glimmerT_42168-T1 Valid prediction for snap_scaffold_18-snap.939-T1 Valid prediction for snap_scaffold_18-snap.918-T1 Valid prediction for GlimmerHMM_glimmerT_42155-T1 Valid prediction for HiQ_model.g28074.t1 -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_18-snap.928-T1 Valid prediction for GlimmerHMM_glimmerT_42178-T1 Valid prediction for CodingQuarry_transcript_23736-T1 Valid prediction for HiQ_model.g28098.t1 Valid prediction for GlimmerHMM_glimmerT_42181-T1 Couldn't classify 126769, 126777 Couldn't classify 127784, 127864 Sorry, prediction pasa_asmbl_19803.p1 fails validation. (ACC) TC 126769-126777 GT AGG (GTG) AG 126902-127041 GT GGG (GAT) AG 127153-127309 GT AGG (ATC) AG 127520-127618 GT AGG (ATC) AG 127784-127864 AG GCA -recovered pasa_asmbl_19803.p1, internal, 126902, 127041 -recovered pasa_asmbl_19803.p1, internal, 127153, 127309 -recovered pasa_asmbl_19803.p1, internal, 127520, 127618 Valid prediction for GlimmerHMM_glimmerT_42186-T1 Valid prediction for Augustus_model.g28077.t1 Valid prediction for snap_scaffold_18-snap.931-T1 Sorry, intron length (4) is less than minimum required (10) Valid prediction for GlimmerHMM_glimmerT_42162-T1 Valid prediction for GlimmerHMM_glimmerT_42164-T1 Couldn't classify 216534, 216586 Sorry, prediction pasa_asmbl_19801.p1 fails validation. (AGG) AC 216534-216586 GT GTG (TCA) AG 216689-216801 GT AAG (GCA) AG 217052-217716 AT AGA add_exon() Sorry, pasa_asmbl_19801.p1 216689-216801-terminal-2 is invalid. -recovered pasa_asmbl_19801.p1, terminal, 216689, 216801 -recovered pasa_asmbl_19801.p1, terminal, 217052, 217716 -recovered pasa_asmbl_19801.p1, internal, 216689, 216801 Valid prediction for HiQ_model.g28073.t1 Valid prediction for GlimmerHMM_glimmerT_42169-T1 Valid prediction for GlimmerHMM_glimmerT_42180-T1 Valid prediction for Augustus_model.g28090.t1 Valid prediction for snap_scaffold_18-snap.943-T1 Valid prediction for snap_scaffold_18-snap.919-T1 Valid prediction for GlimmerHMM_glimmerT_42153-T1 Valid prediction for GlimmerHMM_glimmerT_42183-T1 Valid prediction for Augustus_model.g28086.t1 Valid prediction for CodingQuarry_transcript_23738-T1 Valid prediction for GlimmerHMM_glimmerT_42160-T1 Valid prediction for GlimmerHMM_glimmerT_42189-T1 Valid prediction for snap_scaffold_18-snap.938-T1 Valid prediction for snap_scaffold_18-snap.930-T1 Valid prediction for Augustus_model.g28084.t1 Valid prediction for GlimmerHMM_glimmerT_42174-T1 Valid prediction for snap_scaffold_18-snap.902-T1 Valid prediction for snap_scaffold_18-snap.907-T1 Valid prediction for pasa_asmbl_19802.p1 Valid prediction for GlimmerHMM_glimmerT_42184-T1 Valid prediction for pasa_asmbl_19810.p1 Valid prediction for snap_scaffold_18-snap.914-T1 Valid prediction for GlimmerHMM_glimmerT_42176-T1 Couldn't classify 101497, 101546 Couldn't classify 103503, 103617 Sorry, prediction pasa_asmbl_19806.p2 fails validation. (GCC) CA 101497-101546 GT TGG (GAA) AG 101683-101781 GT GGG (GTC) AG 102157-102276 GT ACG (TCC) AG 103503-103617 GC TGG -recovered pasa_asmbl_19806.p2, internal, 101683, 101781 -recovered pasa_asmbl_19806.p2, internal, 102157, 102276 -recovered pasa_asmbl_19806.p2, internal, 103503, 103617 Valid prediction for snap_scaffold_18-snap.917-T1 Couldn't classify 71663, 71730 Sorry, prediction pasa_asmbl_19808.p1 fails validation. (TTT) TG 71663-71730 GT ACG (AAA) AG 71925-72024 GT GGG (ATC) AG 72313-72382 GT CGG (CTG) AG 72644-72726 CC GAC -recovered pasa_asmbl_19808.p1, terminal, 72644, 72726 -recovered pasa_asmbl_19808.p1, internal, 71925, 72024 -recovered pasa_asmbl_19808.p1, internal, 72313, 72382 Valid prediction for snap_scaffold_18-snap.913-T1 Valid prediction for snap_scaffold_18-snap.924-T1 Valid prediction for snap_scaffold_18-snap.910-T1 Valid prediction for Augustus_model.g28092.t1 Couldn't classify 8294, 8368 Sorry, prediction pasa_asmbl_20212.p1 fails validation. (CTG) GT 8294-8368 GT AGG (GTG) AG 8685-8870 GT AGG (ATC) AG 9719-9845 GT GGG (GGG) AG 9961-10091 GT AGG (GTG) AG 10238-10477 GT AGG (GAT) AG 10572-10679 GT AGG (CCG) AG 10839-11044 GT AGG (GAG) AG 11143-11230 GT AGG (CTG) AG 11328-11459 GT ATG (CTC) AG 11583-11681 AG AGA -recovered pasa_asmbl_20212.p1, terminal, 11583, 11681 -recovered pasa_asmbl_20212.p1, internal, 8685, 8870 -recovered pasa_asmbl_20212.p1, internal, 9719, 9845 -recovered pasa_asmbl_20212.p1, internal, 9961, 10091 -recovered pasa_asmbl_20212.p1, internal, 10238, 10477 -recovered pasa_asmbl_20212.p1, internal, 10572, 10679 -recovered pasa_asmbl_20212.p1, internal, 10839, 11044 -recovered pasa_asmbl_20212.p1, internal, 11143, 11230 -recovered pasa_asmbl_20212.p1, internal, 11328, 11459 Valid prediction for snap_scaffold_18-snap.936-T1 Valid prediction for snap_scaffold_18-snap.945-T1 Valid prediction for GlimmerHMM_glimmerT_42150-T1 Valid prediction for Augustus_model.g28094.t1 Valid prediction for GlimmerHMM_glimmerT_42171-T1 Valid prediction for HiQ_model.g28088.t1 Valid prediction for Augustus_model.g28081.t1 Valid prediction for snap_scaffold_18-snap.905-T1 Valid prediction for GlimmerHMM_glimmerT_42177-T1 Valid prediction for snap_scaffold_18-snap.933-T1 Valid prediction for snap_scaffold_18-snap.925-T1 Valid prediction for snap_scaffold_18-snap.922-T1 -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: snap lend_intergenic: 21076, rend_intergenic: 11651 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 26002, rend_intergenic: 21656 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 35312, rend_intergenic: 26871 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 50196, rend_intergenic: 43228 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 57836, rend_intergenic: 54475 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 103850, rend_intergenic: 90515 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 115110, rend_intergenic: 110910 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 120441, rend_intergenic: 116266 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 123742, rend_intergenic: 120739 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 133602, rend_intergenic: 124003 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 145254, rend_intergenic: 141966 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 154582, rend_intergenic: 150000 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 172635, rend_intergenic: 171228 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 203585, rend_intergenic: 196354 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 219989 -exon list size: 782 building trellis 0.1 0.3 0.4 0.5 0.6 0.8 0.9 1.0 1.1 1.3 1.4 1.5 1.7 1.8 1.9 2.0 2.2 2.3 2.4 2.6 2.7 2.8 2.9 3.1 3.2 3.3 3.4 3.6 3.7 3.8 4.0 4.1 4.2 4.3 4.5 4.6 4.7 4.8 5.0 5.1 5.2 5.4 5.5 5.6 5.7 5.9 6.0 6.1 6.2 6.4 6.5 6.6 6.8 6.9 7.0 7.1 7.3 7.4 7.5 7.7 7.8 7.9 8.0 8.2 8.3 8.4 8.5 8.7 8.8 8.9 9.1 9.2 9.3 9.4 9.6 9.7 9.8 9.9 10.1 10.2 10.3 10.5 10.6 10.7 10.8 11.0 11.1 11.2 11.4 11.5 11.6 11.7 11.9 12.0 12.1 12.2 12.4 12.5 12.6 12.8 12.9 13.0 13.1 13.3 13.4 13.5 13.6 13.8 13.9 14.0 14.2 14.3 14.4 14.5 14.7 14.8 14.9 15.1 15.2 15.3 15.4 15.6 15.7 15.8 15.9 16.1 16.2 16.3 16.5 16.6 16.7 16.8 17.0 17.1 17.2 17.3 17.5 17.6 17.7 17.9 18.0 18.1 18.2 18.4 18.5 18.6 18.8 18.9 19.0 19.1 19.3 19.4 19.5 19.6 19.8 19.9 20.0 20.2 20.3 20.4 20.5 20.7 20.8 20.9 21.0 21.2 21.3 21.4 21.6 21.7 21.8 21.9 22.1 22.2 22.3 22.4 22.6 22.7 22.8 23.0 23.1 23.2 23.3 23.5 23.6 23.7 23.9 24.0 24.1 24.2 24.4 24.5 24.6 24.7 24.9 25.0 25.1 25.3 25.4 25.5 25.6 25.8 25.9 26.0 26.1 26.3 26.4 26.5 26.7 26.8 26.9 27.0 27.2 27.3 27.4 27.6 27.7 27.8 27.9 28.1 28.2 28.3 28.4 28.6 28.7 28.8 29.0 29.1 29.2 29.3 29.5 29.6 29.7 29.8 30.0 30.1 30.2 30.4 30.5 30.6 30.7 30.9 31.0 31.1 31.2 31.4 31.5 31.6 31.8 31.9 32.0 32.1 32.3 32.4 32.5 32.7 32.8 32.9 33.0 33.2 33.3 33.4 33.5 33.7 33.8 33.9 34.1 34.2 34.3 34.4 34.6 34.7 34.8 34.9 35.1 35.2 35.3 35.5 35.6 35.7 35.8 36.0 36.1 36.2 36.4 36.5 36.6 36.7 36.9 37.0 37.1 37.2 37.4 37.5 37.6 37.8 37.9 38.0 38.1 38.3 38.4 38.5 38.6 38.8 38.9 39.0 39.2 39.3 39.4 39.5 39.7 39.8 39.9 40.1 40.2 40.3 40.4 40.6 40.7 40.8 40.9 41.1 41.2 41.3 41.5 41.6 41.7 41.8 42.0 42.1 42.2 42.3 42.5 42.6 42.7 42.9 43.0 43.1 43.2 43.4 43.5 43.6 43.8 43.9 44.0 44.1 44.3 44.4 44.5 44.6 44.8 44.9 45.0 45.2 45.3 45.4 45.5 45.7 45.8 45.9 46.0 46.2 46.3 46.4 46.6 46.7 46.8 46.9 47.1 47.2 47.3 47.4 47.6 47.7 47.8 48.0 48.1 48.2 48.3 48.5 48.6 48.7 48.9 49.0 49.1 49.2 49.4 49.5 49.6 49.7 49.9 50.0 50.1 50.3 50.4 50.5 50.6 50.8 50.9 51.0 51.1 51.3 51.4 51.5 51.7 51.8 51.9 52.0 52.2 52.3 52.4 52.6 52.7 52.8 52.9 53.1 53.2 53.3 53.4 53.6 53.7 53.8 54.0 54.1 54.2 54.3 54.5 54.6 54.7 54.8 55.0 55.1 55.2 55.4 55.5 55.6 55.7 55.9 56.0 56.1 56.2 56.4 56.5 56.6 56.8 56.9 57.0 57.1 57.3 57.4 57.5 57.7 57.8 57.9 58.0 58.2 58.3 58.4 58.5 58.7 58.8 58.9 59.1 59.2 59.3 59.4 59.6 59.7 59.8 59.9 60.1 60.2 60.3 60.5 60.6 60.7 60.8 61.0 61.1 61.2 61.4 61.5 61.6 61.7 61.9 62.0 62.1 62.2 62.4 62.5 62.6 62.8 62.9 63.0 63.1 63.3 63.4 63.5 63.6 63.8 63.9 64.0 64.2 64.3 64.4 64.5 64.7 64.8 64.9 65.1 65.2 65.3 65.4 65.6 65.7 65.8 65.9 66.1 66.2 66.3 66.5 66.6 66.7 66.8 67.0 67.1 67.2 67.3 67.5 67.6 67.7 67.9 68.0 68.1 68.2 68.4 68.5 68.6 68.8 68.9 69.0 69.1 69.3 69.4 69.5 69.6 69.8 69.9 70.0 70.2 70.3 70.4 70.5 70.7 70.8 70.9 71.0 71.2 71.3 71.4 71.6 71.7 71.8 71.9 72.1 72.2 72.3 72.4 72.6 72.7 72.8 73.0 73.1 73.2 73.3 73.5 73.6 73.7 73.9 74.0 74.1 74.2 74.4 74.5 74.6 74.7 74.9 75.0 75.1 75.3 75.4 75.5 75.6 75.8 75.9 76.0 76.1 76.3 76.4 76.5 76.7 76.8 76.9 77.0 77.2 77.3 77.4 77.6 77.7 77.8 77.9 78.1 78.2 78.3 78.4 78.6 78.7 78.8 79.0 79.1 79.2 79.3 79.5 79.6 79.7 79.8 80.0 80.1 80.2 80.4 80.5 80.6 80.7 80.9 81.0 81.1 81.2 81.4 81.5 81.6 81.8 81.9 82.0 82.1 82.3 82.4 82.5 82.7 82.8 82.9 83.0 83.2 83.3 83.4 83.5 83.7 83.8 83.9 84.1 84.2 84.3 84.4 84.6 84.7 84.8 84.9 85.1 85.2 85.3 85.5 85.6 85.7 85.8 86.0 86.1 86.2 86.4 86.5 86.6 86.7 86.9 87.0 87.1 87.2 87.4 87.5 87.6 87.8 87.9 88.0 88.1 88.3 88.4 88.5 88.6 88.8 88.9 89.0 89.2 89.3 89.4 89.5 89.7 89.8 89.9 90.1 90.2 90.3 90.4 90.6 90.7 90.8 90.9 91.1 91.2 91.3 91.5 91.6 91.7 91.8 92.0 92.1 92.2 92.3 92.5 92.6 92.7 92.9 93.0 93.1 93.2 93.4 93.5 93.6 93.8 93.9 94.0 94.1 94.3 94.4 94.5 94.6 94.8 94.9 95.0 95.2 95.3 95.4 95.5 95.7 95.8 95.9 96.0 96.2 96.3 96.4 96.6 96.7 96.8 96.9 97.1 97.2 97.3 97.4 97.6 97.7 97.8 98.0 98.1 98.2 98.3 98.5 98.6 98.7 98.9 99.0 99.1 99.2 99.4 99.5 99.6 99.7 99.9 -found 34 predictions from path traversal Error with prediction: snap lend_intergenic: 21076, rend_intergenic: 11651 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 26002, rend_intergenic: 21656 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 35312, rend_intergenic: 26871 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 50196, rend_intergenic: 43228 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 57836, rend_intergenic: 54475 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 103850, rend_intergenic: 90515 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 115110, rend_intergenic: 110910 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 120441, rend_intergenic: 116266 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 123742, rend_intergenic: 120739 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 133602, rend_intergenic: 124003 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 145254, rend_intergenic: 141966 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 154582, rend_intergenic: 150000 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 172635, rend_intergenic: 171228 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 203585, rend_intergenic: 196354 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. GOT 5prime partial gene. -reporting highest scoring path thru the trellis. -found 31 predictions persist after filtering for low support