-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_1751

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GlimmerHMM_glimmerT_61307-T1
Couldn't classify 687, 741
Couldn't classify 1358, 1453
Sorry, prediction snap_scaffold_1751-snap.1-T1 fails validation.
(TTC)	 AG	687-741	GT	ACG
(CCG)	 AG	878-1186	GT	GAG
(CCC)	 AG	1358-1453	GT	GTG
-recovered snap_scaffold_1751-snap.1-T1, internal, 687, 741
-recovered snap_scaffold_1751-snap.1-T1, internal, 878, 1186
-recovered snap_scaffold_1751-snap.1-T1, internal, 1358, 1453
Valid prediction for Augustus_model.g40631.t1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)
-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 1984
-exon list size: 10


building trellis

8.3    
16.7    
25.0    
33.3    
41.7    
50.0    
58.3    
66.7    
75.0    
83.3    
91.7    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 1 predictions persist after filtering for low support