-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_17/scaffold_17_8633249-8906552

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for HiQ_model.g27183.t1
Couldn't classify 224108, 224180
Sorry, prediction pasa_asmbl_19032.p1 fails validation.
(ATG)	 CC	222886-222919	GT	AGG
(CCG)	 AG	223127-223215	GC	AGG
(GAG)	 AG	223340-223430	GT	AGG
(GGG)	 AG	223544-223671	GT	AGG
(GGA)	 AG	223782-223885	GT	AGG
(TCG)	 AG	224108-224180	GC	GAG
-recovered pasa_asmbl_19032.p1, initial, 222886, 222919
-recovered pasa_asmbl_19032.p1, internal, 223127, 223215
-recovered pasa_asmbl_19032.p1, internal, 223340, 223430
-recovered pasa_asmbl_19032.p1, internal, 223544, 223671
-recovered pasa_asmbl_19032.p1, internal, 223782, 223885
-recovered pasa_asmbl_19032.p1, internal, 224108, 224180
Valid prediction for Augustus_model.g27168.t1
Valid prediction for GlimmerHMM_glimmerT_40762-T1
Valid prediction for CodingQuarry_transcript_22081-T1
Valid prediction for CodingQuarry_transcript_22092-T1
Valid prediction for snap_scaffold_17-snap.1723-T1
Valid prediction for snap_scaffold_17-snap.1739-T1
Valid prediction for snap_scaffold_17-snap.1761-T1
Valid prediction for snap_scaffold_17-snap.1763-T1
Valid prediction for GlimmerHMM_glimmerT_40747-T1
Valid prediction for Augustus_model.g27180.t1
Valid prediction for GlimmerHMM_glimmerT_40766-T1
Valid prediction for pasa_asmbl_19035.p1
Valid prediction for snap_scaffold_17-snap.1720-T1
Valid prediction for Augustus_model.g27159.t1
Valid prediction for GlimmerHMM_glimmerT_40765-T1
Valid prediction for Augustus_model.g27164.t1
Valid prediction for CodingQuarry_transcript_22084-T1
Valid prediction for GlimmerHMM_glimmerT_40746-T1
Valid prediction for GlimmerHMM_glimmerT_40767-T1
Valid prediction for snap_scaffold_17-snap.1727-T1
Valid prediction for GlimmerHMM_glimmerT_40738-T1
Valid prediction for snap_scaffold_17-snap.1744-T1
Valid prediction for Augustus_model.g27161.t1
Valid prediction for GlimmerHMM_glimmerT_40736-T1
Valid prediction for Augustus_model.g27188.t1
Valid prediction for CodingQuarry_transcript_22093-T1
Valid prediction for snap_scaffold_17-snap.1722-T1
Valid prediction for Augustus_model.g27182.t1
Valid prediction for GlimmerHMM_glimmerT_40740-T1
Valid prediction for snap_scaffold_17-snap.1734-T1
Valid prediction for HiQ_model.g27185.t1
Valid prediction for snap_scaffold_17-snap.1754-T1
Valid prediction for snap_scaffold_17-snap.1760-T1
Valid prediction for GlimmerHMM_glimmerT_40743-T1
Valid prediction for snap_scaffold_17-snap.1741-T1
Couldn't classify 227231, 227236
Sorry, prediction pasa_asmbl_19034.p1 fails validation.
(TAT)	 TC	227231-227236	GT	TGG
(GAG)	 AG	227486-227734	GT	TGG
(GCT)	 AG	227868-227979	GT	CCG
(TGT)	 AG	228121-228329	GT	AGG
(GGA)	 AG	228517-228666	GT	AGG
(ATC)	 AG	228830-228895	CT	AAC
-recovered pasa_asmbl_19034.p1, terminal, 228830, 228895
-recovered pasa_asmbl_19034.p1, internal, 227486, 227734
-recovered pasa_asmbl_19034.p1, internal, 227868, 227979
-recovered pasa_asmbl_19034.p1, internal, 228121, 228329
-recovered pasa_asmbl_19034.p1, internal, 228517, 228666
Valid prediction for snap_scaffold_17-snap.1735-T1
Valid prediction for HiQ_model.g27186.t1
Valid prediction for snap_scaffold_17-snap.1756-T1
Valid prediction for snap_scaffold_17-snap.1758-T1
Valid prediction for pasa_asmbl_19021.p3
Valid prediction for pasa_asmbl_19040.p1
Valid prediction for GlimmerHMM_glimmerT_40764-T1
Valid prediction for GlimmerHMM_glimmerT_40761-T1
Valid prediction for CodingQuarry_transcript_22083-T1
Valid prediction for snap_scaffold_17-snap.1729-T1
Valid prediction for CodingQuarry_transcript_22096-T1
Valid prediction for GlimmerHMM_glimmerT_40754-T1
Couldn't classify 250868, 251020
Sorry, prediction pasa_asmbl_19044.p1 fails validation.
(GAG)	 AG	250868-251020	GT	AGG
(GTG)	 AG	252454-252627	GT	AGG
(GAG)	 AG	252760-253434	GA	GAG
-recovered pasa_asmbl_19044.p1, terminal, 252760, 253434
-recovered pasa_asmbl_19044.p1, internal, 250868, 251020
-recovered pasa_asmbl_19044.p1, internal, 252454, 252627
Valid prediction for GlimmerHMM_glimmerT_40769-T1
Valid prediction for Augustus_model.g27167.t1
Couldn't classify 249500, 249595
Sorry, prediction pasa_asmbl_19043.p1 fails validation.
(ATG)	 AA	248587-248856	GT	AGG
(GAA)	 AG	249104-249166	GT	ATG
(GAG)	 AG	249500-249595	CC	GAC
-recovered pasa_asmbl_19043.p1, initial, 248587, 248856
-recovered pasa_asmbl_19043.p1, internal, 249104, 249166
Couldn't classify 224353, 224372
Couldn't classify 226334, 226363
Sorry, prediction pasa_asmbl_19033.p1 fails validation.
(AAC)	 AC	224353-224372	GT	AGG
(TGA)	 AG	224609-224696	GT	AGG
(GAG)	 AG	224821-224914	GT	GGG
(ACC)	 AG	225278-225348	GT	AGG
(ACT)	 AG	225497-225622	GT	AGG
(GTG)	 AG	225721-225825	GT	AGG
(CAA)	 AG	226139-226207	GT	AGG
(AGT)	 AG	226334-226363	TG	AGT
-recovered pasa_asmbl_19033.p1, internal, 224609, 224696
-recovered pasa_asmbl_19033.p1, internal, 224821, 224914
-recovered pasa_asmbl_19033.p1, internal, 225278, 225348
-recovered pasa_asmbl_19033.p1, internal, 225497, 225622
-recovered pasa_asmbl_19033.p1, internal, 225721, 225825
-recovered pasa_asmbl_19033.p1, internal, 226139, 226207
Valid prediction for snap_scaffold_17-snap.1753-T1
Valid prediction for CodingQuarry_transcript_22085-T1
Valid prediction for snap_scaffold_17-snap.1737-T1
Valid prediction for GlimmerHMM_glimmerT_40756-T1
Valid prediction for GlimmerHMM_glimmerT_40748-T1
Couldn't classify 86030, 86085
Couldn't classify 87451, 87468
Sorry, prediction pasa_asmbl_19016.p1 fails validation.
(TGC)	 AG	86030-86085	GT	AGG
(CAG)	 AG	86192-86352	GT	AGG
(GCC)	 AG	86666-86780	GT	AGG
(GGG)	 AG	86962-87083	GT	AGG
(GAA)	 AG	87199-87299	GT	AGG
(CAC)	 AG	87451-87468	AG	GGA
add_exon() Sorry, pasa_asmbl_19016.p1 86962-87083-terminal-2 is invalid.
-recovered pasa_asmbl_19016.p1, terminal, 86962, 87083
-recovered pasa_asmbl_19016.p1, internal, 86030, 86085
-recovered pasa_asmbl_19016.p1, internal, 86192, 86352
-recovered pasa_asmbl_19016.p1, internal, 86666, 86780
-recovered pasa_asmbl_19016.p1, internal, 86962, 87083
-recovered pasa_asmbl_19016.p1, internal, 87199, 87299
Valid prediction for snap_scaffold_17-snap.1759-T1
Valid prediction for Augustus_model.g27169.t1
Valid prediction for snap_scaffold_17-snap.1724-T1
Valid prediction for snap_scaffold_17-snap.1731-T1
Valid prediction for HiQ_model.g27163.t1
Valid prediction for snap_scaffold_17-snap.1743-T1
Valid prediction for Augustus_model.g27187.t1
Valid prediction for snap_scaffold_17-snap.1736-T1
Valid prediction for GlimmerHMM_glimmerT_40742-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GlimmerHMM_glimmerT_40737-T1
Valid prediction for Augustus_model.g27160.t1
Valid prediction for snap_scaffold_17-snap.1717-T1
Valid prediction for GlimmerHMM_glimmerT_40750-T1
Valid prediction for GlimmerHMM_glimmerT_40758-T1
Valid prediction for HiQ_model.g27156.t1
Valid prediction for CodingQuarry_transcript_22082-T1
Valid prediction for HiQ_model.g27181.t1
Valid prediction for snap_scaffold_17-snap.1725-T1
Valid prediction for Augustus_model.g27158.t1
Valid prediction for HiQ_model.g27177.t1
Valid prediction for HiQ_model.g27184.t1
Valid prediction for pasa_asmbl_18117.p1
Valid prediction for Augustus_model.g27165.t1
Valid prediction for pasa_asmbl_18123.p1
Valid prediction for GlimmerHMM_glimmerT_40755-T1
Valid prediction for CodingQuarry_transcript_22080-T1
Valid prediction for Augustus_model.g27172.t1
Valid prediction for snap_scaffold_17-snap.1738-T1
Valid prediction for HiQ_model.g27178.t1
Valid prediction for Augustus_model.g27176.t1
Valid prediction for CodingQuarry_transcript_22091-T1
Valid prediction for GlimmerHMM_glimmerT_40739-T1
Valid prediction for CodingQuarry_transcript_22095-T1
Valid prediction for CodingQuarry_transcript_22090-T1
Valid prediction for GlimmerHMM_glimmerT_40751-T1
Valid prediction for snap_scaffold_17-snap.1730-T1
Valid prediction for CodingQuarry_transcript_22087-T1
Valid prediction for snap_scaffold_17-snap.1719-T1
Valid prediction for Augustus_model.g27174.t1
Valid prediction for Augustus_model.g27171.t1
Couldn't classify 263952, 263989
Sorry, prediction pasa_asmbl_18108.p1 fails validation.
(AAA)	 AG	263952-263989	GT	TGG
(CGT)	 AG	264584-264724	GT	AAG
(TAA)	 AG	264857-264971	GT	ATG
(CTC)	 AG	265095-265181	GT	ATG
(CTT)	 AG	265345-265413	GT	AGG
(GAG)	 AG	265608-265823	GT	TGG
(GCC)	 AG	265953-266061	GT	TGG
(AAT)	 AG	266180-266311	GT	AGG
(AGT)	 AG	266414-266469	GT	AGG
(GAG)	 AG	266637-266807	AA	AAA
-recovered pasa_asmbl_18108.p1, terminal, 266637, 266807
-recovered pasa_asmbl_18108.p1, internal, 263952, 263989
-recovered pasa_asmbl_18108.p1, internal, 264584, 264724
-recovered pasa_asmbl_18108.p1, internal, 264857, 264971
-recovered pasa_asmbl_18108.p1, internal, 265095, 265181
-recovered pasa_asmbl_18108.p1, internal, 265345, 265413
-recovered pasa_asmbl_18108.p1, internal, 265608, 265823
-recovered pasa_asmbl_18108.p1, internal, 265953, 266061
-recovered pasa_asmbl_18108.p1, internal, 266180, 266311
-recovered pasa_asmbl_18108.p1, internal, 266414, 266469
Valid prediction for GlimmerHMM_glimmerT_40760-T1
Valid prediction for CodingQuarry_transcript_22086-T1
Valid prediction for snap_scaffold_17-snap.1721-T1
Valid prediction for HiQ_model.g27157.t1
Valid prediction for GlimmerHMM_glimmerT_40741-T1
Valid prediction for pasa_asmbl_18120.p1
Valid prediction for GlimmerHMM_glimmerT_40735-T1
Valid prediction for pasa_asmbl_18124.p1
Couldn't classify 134626, 134697
Sorry, prediction pasa_asmbl_18113.p1 fails validation.
(GGC)	 GA	134626-134697	GT	AGG
(CCT)	 AG	135119-135220	GT	AGG
(ACA)	 AG	136401-136481	GT	AGG
(GCT)	 AG	136934-137032	AC	AGA
-recovered pasa_asmbl_18113.p1, terminal, 136934, 137032
-recovered pasa_asmbl_18113.p1, internal, 135119, 135220
-recovered pasa_asmbl_18113.p1, internal, 136401, 136481
Valid prediction for snap_scaffold_17-snap.1757-T1
Valid prediction for Augustus_model.g27166.t1
Couldn't classify 32489, 32522
Sorry, prediction pasa_asmbl_18131.p1 fails validation.
(CTG)	 TC	32489-32522	GT	AGG
(ACA)	 AG	32733-32851	GT	ATG
(CCG)	 AG	34620-34751	GT	AGG
(GTG)	 AG	34882-34991	GT	CGG
(ACT)	 AG	35664-35808	GT	GGG
(GTG)	 AG	35909-36056	GT	TAG
(TCG)	 AG	36203-36219	AA	AGA
-recovered pasa_asmbl_18131.p1, terminal, 36203, 36219
-recovered pasa_asmbl_18131.p1, internal, 32733, 32851
-recovered pasa_asmbl_18131.p1, internal, 34620, 34751
-recovered pasa_asmbl_18131.p1, internal, 34882, 34991
-recovered pasa_asmbl_18131.p1, internal, 35664, 35808
-recovered pasa_asmbl_18131.p1, internal, 35909, 36056
Valid prediction for CodingQuarry_transcript_22088-T1
Valid prediction for snap_scaffold_17-snap.1728-T1
Valid prediction for snap_scaffold_17-snap.1750-T1
Couldn't classify 257480, 257593
Sorry, prediction pasa_asmbl_18111.p1 fails validation.
(CAA)	 GC	257480-257593	GT	AGG
(ACC)	 AG	257793-257923	GT	GGG
(TGA)	 AG	258035-258152	GT	TGG
(TAC)	 AG	258270-258422	GT	TGG
(AAT)	 AG	258820-259119	GT	TGG
(CTG)	 AG	259346-259551	GT	CAG
(CAT)	 AG	259694-259777	GT	AGG
(GTT)	 AG	259863-259911	GT	GGG
(GAC)	 AG	260014-260098	GT	ATG
(TGA)	 AG	260175-260372	GT	TGG
(GCA)	 AG	260492-260627	GT	AGG
(GGC)	 AG	260747-260812	GT	AGG
(TGT)	 AG	260937-261018	GT	ATG
(TGA)	 AG	261147-261149	AT	GAA
-recovered pasa_asmbl_18111.p1, terminal, 261147, 261149
-recovered pasa_asmbl_18111.p1, internal, 257793, 257923
-recovered pasa_asmbl_18111.p1, internal, 258035, 258152
-recovered pasa_asmbl_18111.p1, internal, 258270, 258422
-recovered pasa_asmbl_18111.p1, internal, 258820, 259119
-recovered pasa_asmbl_18111.p1, internal, 259346, 259551
-recovered pasa_asmbl_18111.p1, internal, 259694, 259777
-recovered pasa_asmbl_18111.p1, internal, 259863, 259911
-recovered pasa_asmbl_18111.p1, internal, 260014, 260098
-recovered pasa_asmbl_18111.p1, internal, 260175, 260372
-recovered pasa_asmbl_18111.p1, internal, 260492, 260627
-recovered pasa_asmbl_18111.p1, internal, 260747, 260812
-recovered pasa_asmbl_18111.p1, internal, 260937, 261018
Valid prediction for GlimmerHMM_glimmerT_40768-T1
Valid prediction for GlimmerHMM_glimmerT_40753-T1
Valid prediction for snap_scaffold_17-snap.1740-T1
Valid prediction for Augustus_model.g27179.t1
Valid prediction for snap_scaffold_17-snap.1732-T1
Valid prediction for snap_scaffold_17-snap.1745-T1
Valid prediction for snap_scaffold_17-snap.1762-T1
Valid prediction for snap_scaffold_17-snap.1755-T1
Valid prediction for GlimmerHMM_glimmerT_40744-T1
Valid prediction for snap_scaffold_17-snap.1749-T1
Valid prediction for GlimmerHMM_glimmerT_40757-T1
Valid prediction for snap_scaffold_17-snap.1751-T1
Valid prediction for pasa_asmbl_18128.p1
Valid prediction for Augustus_model.g27162.t1
Valid prediction for snap_scaffold_17-snap.1747-T1
Valid prediction for Augustus_model.g27175.t1
Valid prediction for snap_scaffold_17-snap.1733-T1
Valid prediction for Augustus_model.g27170.t1
Valid prediction for GlimmerHMM_glimmerT_40745-T1
Valid prediction for GlimmerHMM_glimmerT_40749-T1
Valid prediction for CodingQuarry_transcript_22094-T1
Valid prediction for GlimmerHMM_glimmerT_40763-T1
Valid prediction for snap_scaffold_17-snap.1748-T1
Valid prediction for GlimmerHMM_glimmerT_40752-T1
Valid prediction for snap_scaffold_17-snap.1726-T1
Valid prediction for CodingQuarry_transcript_22089-T1
Couldn't classify 32339, 32395
Sorry, prediction pasa_asmbl_18133.p1 fails validation.
(ATG)	 AG	31512-31737	GT	GGG
(TTC)	 AG	31856-31983	GT	AGG
(GTT)	 AG	32127-32219	GT	AGG
(GTG)	 AG	32339-32395	GA	GAG
-recovered pasa_asmbl_18133.p1, initial, 31512, 31737
-recovered pasa_asmbl_18133.p1, internal, 31512, 31737
-recovered pasa_asmbl_18133.p1, internal, 31856, 31983
-recovered pasa_asmbl_18133.p1, internal, 32127, 32219
Valid prediction for snap_scaffold_17-snap.1742-T1
Valid prediction for snap_scaffold_17-snap.1746-T1
Valid prediction for Augustus_model.g27173.t1
Valid prediction for snap_scaffold_17-snap.1752-T1
Valid prediction for snap_scaffold_17-snap.1718-T1
Valid prediction for GlimmerHMM_glimmerT_40759-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 76042, rend_intergenic: 72758  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 135929, rend_intergenic: 133977  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 136886, rend_intergenic: 135946  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 139482, rend_intergenic: 137035  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 160575, rend_intergenic: 142379  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 228895, rend_intergenic: 224593  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 266586, rend_intergenic: 263656  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 273304
-exon list size: 531


building trellis

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48.8    
49.0    
49.2    
49.3    
49.5    
49.7    
49.9    
50.1    
50.3    
50.5    
50.7    
50.8    
51.0    
51.2    
51.4    
51.6    
51.8    
52.0    
52.2    
52.3    
52.5    
52.7    
52.9    
53.1    
53.3    
53.5    
53.7    
53.8    
54.0    
54.2    
54.4    
54.6    
54.8    
55.0    
55.2    
55.3    
55.5    
55.7    
55.9    
56.1    
56.3    
56.5    
56.7    
56.8    
57.0    
57.2    
57.4    
57.6    
57.8    
58.0    
58.2    
58.3    
58.5    
58.7    
58.9    
59.1    
59.3    
59.5    
59.7    
59.8    
60.0    
60.2    
60.4    
60.6    
60.8    
61.0    
61.2    
61.4    
61.5    
61.7    
61.9    
62.1    
62.3    
62.5    
62.7    
62.9    
63.0    
63.2    
63.4    
63.6    
63.8    
64.0    
64.2    
64.4    
64.5    
64.7    
64.9    
65.1    
65.3    
65.5    
65.7    
65.9    
66.0    
66.2    
66.4    
66.6    
66.8    
67.0    
67.2    
67.4    
67.5    
67.7    
67.9    
68.1    
68.3    
68.5    
68.7    
68.9    
69.0    
69.2    
69.4    
69.6    
69.8    
70.0    
70.2    
70.4    
70.5    
70.7    
70.9    
71.1    
71.3    
71.5    
71.7    
71.9    
72.0    
72.2    
72.4    
72.6    
72.8    
73.0    
73.2    
73.4    
73.5    
73.7    
73.9    
74.1    
74.3    
74.5    
74.7    
74.9    
75.0    
75.2    
75.4    
75.6    
75.8    
76.0    
76.2    
76.4    
76.5    
76.7    
76.9    
77.1    
77.3    
77.5    
77.7    
77.9    
78.0    
78.2    
78.4    
78.6    
78.8    
79.0    
79.2    
79.4    
79.5    
79.7    
79.9    
80.1    
80.3    
80.5    
80.7    
80.9    
81.1    
81.2    
81.4    
81.6    
81.8    
82.0    
82.2    
82.4    
82.6    
82.7    
82.9    
83.1    
83.3    
83.5    
83.7    
83.9    
84.1    
84.2    
84.4    
84.6    
84.8    
85.0    
85.2    
85.4    
85.6    
85.7    
85.9    
86.1    
86.3    
86.5    
86.7    
86.9    
87.1    
87.2    
87.4    
87.6    
87.8    
88.0    
88.2    
88.4    
88.6    
88.7    
88.9    
89.1    
89.3    
89.5    
89.7    
89.9    
90.1    
90.2    
90.4    
90.6    
90.8    
91.0    
91.2    
91.4    
91.6    
91.7    
91.9    
92.1    
92.3    
92.5    
92.7    
92.9    
93.1    
93.2    
93.4    
93.6    
93.8    
94.0    
94.2    
94.4    
94.6    
94.7    
94.9    
95.1    
95.3    
95.5    
95.7    
95.9    
96.1    
96.2    
96.4    
96.6    
96.8    
97.0    
97.2    
97.4    
97.6    
97.7    
97.9    
98.1    
98.3    
98.5    
98.7    
98.9    
99.1    
99.2    
99.4    
99.6    
99.8    
-found 42 predictions from path traversal
Error with prediction: snap lend_intergenic: 76042, rend_intergenic: 72758  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 135929, rend_intergenic: 133977  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 136886, rend_intergenic: 135946  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 139482, rend_intergenic: 137035  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 160575, rend_intergenic: 142379  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 228895, rend_intergenic: 224593  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 266586, rend_intergenic: 263656  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 39 predictions persist after filtering for low support