-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_17/scaffold_17_10124101-10316489 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for GlimmerHMM_glimmerT_40932-T1 Valid prediction for GlimmerHMM_glimmerT_40916-T1 Valid prediction for snap_scaffold_17-snap.2049-T1 Valid prediction for GlimmerHMM_glimmerT_40937-T1 Valid prediction for Augustus_model.g27316.t1 Valid prediction for Augustus_model.g27332.t1 Valid prediction for snap_scaffold_17-snap.2032-T1 Valid prediction for pasa_asmbl_19187.p1 Valid prediction for Augustus_model.g27315.t1 Valid prediction for snap_scaffold_17-snap.2039-T1 Valid prediction for GlimmerHMM_glimmerT_40922-T1 Valid prediction for GlimmerHMM_glimmerT_40935-T1 Valid prediction for snap_scaffold_17-snap.2058-T1 Valid prediction for snap_scaffold_17-snap.2046-T1 Valid prediction for Augustus_model.g27320.t1 Valid prediction for GlimmerHMM_glimmerT_40918-T1 Valid prediction for snap_scaffold_17-snap.2051-T1 Valid prediction for GlimmerHMM_glimmerT_40917-T1 Valid prediction for GlimmerHMM_glimmerT_40920-T1 Valid prediction for snap_scaffold_17-snap.2030-T1 Valid prediction for snap_scaffold_17-snap.2056-T1 Couldn't classify 8976, 9073 Sorry, prediction pasa_asmbl_19186.p1 fails validation. (GAG) GA 8976-9073 GT GAG (GTG) AG 9277-9380 GT GGG (GTG) AG 9889-10160 AG GAA -recovered pasa_asmbl_19186.p1, terminal, 9889, 10160 -recovered pasa_asmbl_19186.p1, internal, 9277, 9380 Valid prediction for snap_scaffold_17-snap.2060-T1 Valid prediction for snap_scaffold_17-snap.2019-T1 Valid prediction for CodingQuarry_transcript_22160-T1 Valid prediction for snap_scaffold_17-snap.2050-T1 Valid prediction for snap_scaffold_17-snap.2027-T1 Valid prediction for GlimmerHMM_glimmerT_40914-T1 Valid prediction for snap_scaffold_17-snap.2026-T1 Valid prediction for snap_scaffold_17-snap.2045-T1 Valid prediction for snap_scaffold_17-snap.2037-T1 Valid prediction for snap_scaffold_17-snap.2022-T1 Valid prediction for Augustus_model.g27325.t1 Valid prediction for snap_scaffold_17-snap.2024-T1 Valid prediction for snap_scaffold_17-snap.2021-T1 Valid prediction for GlimmerHMM_glimmerT_40923-T1 Valid prediction for snap_scaffold_17-snap.2034-T1 Valid prediction for Augustus_model.g27322.t1 Valid prediction for Augustus_model.g27318.t1 Valid prediction for Augustus_model.g27314.t1 Valid prediction for GlimmerHMM_glimmerT_40924-T1 Valid prediction for GlimmerHMM_glimmerT_40915-T1 Couldn't classify 156192, 156297 Couldn't classify 157002, 157050 Sorry, prediction pasa_asmbl_19458.p1 fails validation. (TGC) TC 156192-156297 GT AGG (GAC) AG 156687-156909 GT TGG (GAG) AG 157002-157050 TC CGT -recovered pasa_asmbl_19458.p1, internal, 156687, 156909 Valid prediction for GlimmerHMM_glimmerT_40919-T1 Valid prediction for Augustus_model.g27321.t1 Valid prediction for Augustus_model.g27330.t1 Valid prediction for Augustus_model.g27317.t1 Valid prediction for snap_scaffold_17-snap.2016-T1 -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_17-snap.2033-T1 Valid prediction for snap_scaffold_17-snap.2062-T1 Valid prediction for snap_scaffold_17-snap.2043-T1 Valid prediction for snap_scaffold_17-snap.2054-T1 Couldn't classify 92534, 92553 Couldn't classify 96859, 96989 Sorry, prediction pasa_asmbl_18236.p1 fails validation. (ATC) AC 92534-92553 GT GGG (GGG) AG 92641-92743 GT AGG (ACG) AG 93088-93177 GT AGG (GTC) AG 93922-94043 GT CGG (GTC) AG 94345-94466 GT GAG (GAG) AG 94705-94809 GT GGG (GTT) AG 94983-95071 GT GGG (GAG) AG 95517-95600 GT TGG (ATC) AG 95747-95885 GT CGG (ACA) AG 96067-96155 GT AGG (GAG) AG 96541-96640 GT GGG (ACT) AG 96859-96989 GC GAG -recovered pasa_asmbl_18236.p1, internal, 92641, 92743 -recovered pasa_asmbl_18236.p1, internal, 93088, 93177 -recovered pasa_asmbl_18236.p1, internal, 93922, 94043 -recovered pasa_asmbl_18236.p1, internal, 94345, 94466 -recovered pasa_asmbl_18236.p1, internal, 94705, 94809 -recovered pasa_asmbl_18236.p1, internal, 94983, 95071 -recovered pasa_asmbl_18236.p1, internal, 95517, 95600 -recovered pasa_asmbl_18236.p1, internal, 95747, 95885 -recovered pasa_asmbl_18236.p1, internal, 96067, 96155 -recovered pasa_asmbl_18236.p1, internal, 96541, 96640 -recovered pasa_asmbl_18236.p1, internal, 96859, 96989 Valid prediction for HiQ_model.g27328.t1 Valid prediction for GlimmerHMM_glimmerT_40925-T1 Valid prediction for GlimmerHMM_glimmerT_40931-T1 Valid prediction for snap_scaffold_17-snap.2025-T1 Valid prediction for snap_scaffold_17-snap.2040-T1 Valid prediction for Augustus_model.g27331.t1 Valid prediction for Augustus_model.g27323.t1 Couldn't classify 64955, 65091 Couldn't classify 65236, 65351 Sorry, prediction CodingQuarry_transcript_22159-T1 fails validation. (ATG) CC 64695-64765 GT AAG (TTT) AG 64955-65091 TT ACT (CTC) TC 65236-65351 TG AAT -recovered CodingQuarry_transcript_22159-T1, initial, 64695, 64765 Couldn't classify 64467, 64765 Sorry, prediction pasa_asmbl_18239.p1 fails validation. (AGC) AC 64467-64765 GT AAG (TTT) AG 64955-65096 GT TGG (GGA) AG 65242-65450 GT AGG (GGT) AG 65556-66255 AA AAA -recovered pasa_asmbl_18239.p1, terminal, 65556, 66255 -recovered pasa_asmbl_18239.p1, internal, 64955, 65096 -recovered pasa_asmbl_18239.p1, internal, 65242, 65450 Valid prediction for snap_scaffold_17-snap.2061-T1 Couldn't classify 118204, 118345 Sorry, prediction pasa_asmbl_18496.p1 fails validation. (ATG) AC 116813-116864 GT CGG (GAG) AG 116959-117073 GT AAG (GCG) AG 117252-117334 GT AGG (GCT) AG 117718-117781 GT GGG (GAA) AG 117994-118062 GT AGG (AGC) AG 118204-118345 TA AGT -recovered pasa_asmbl_18496.p1, initial, 116813, 116864 -recovered pasa_asmbl_18496.p1, internal, 116959, 117073 -recovered pasa_asmbl_18496.p1, internal, 117252, 117334 -recovered pasa_asmbl_18496.p1, internal, 117718, 117781 -recovered pasa_asmbl_18496.p1, internal, 117994, 118062 Valid prediction for GlimmerHMM_glimmerT_40921-T1 Couldn't classify 187526, 187843 Sorry, prediction pasa_asmbl_19183.p1 fails validation. (CCA) CC 187526-187843 TG CCT Valid prediction for GlimmerHMM_glimmerT_40936-T1 Valid prediction for snap_scaffold_17-snap.2041-T1 Valid prediction for snap_scaffold_17-snap.2053-T1 Couldn't classify 97405, 97449 Sorry, prediction pasa_asmbl_18235.p1 fails validation. (AAG) AG 97405-97449 GT AGG (GTG) AG 97661-97793 GT AGG (AAT) AG 98079-98116 GT TGG (TCT) AG 98341-98544 TC AGT -recovered pasa_asmbl_18235.p1, terminal, 98341, 98544 -recovered pasa_asmbl_18235.p1, internal, 97405, 97449 -recovered pasa_asmbl_18235.p1, internal, 97661, 97793 -recovered pasa_asmbl_18235.p1, internal, 98079, 98116 Couldn't classify 115340, 115411 Couldn't classify 116124, 116266 Sorry, prediction pasa_asmbl_18521.p1 fails validation. (GGA) CA 115340-115411 GT AGG (GAC) AG 115553-115753 GT AGG (ATG) AG 115843-115930 GT GGG (GTC) AG 116124-116266 GT AGG -recovered pasa_asmbl_18521.p1, initial, 115843, 115930 -recovered pasa_asmbl_18521.p1, internal, 115553, 115753 -recovered pasa_asmbl_18521.p1, internal, 115843, 115930 -recovered pasa_asmbl_18521.p1, internal, 116124, 116266 Valid prediction for snap_scaffold_17-snap.2028-T1 Valid prediction for GlimmerHMM_glimmerT_40933-T1 Couldn't classify 119693, 119767 Sorry, prediction pasa_asmbl_18231.p1 fails validation. (CTG) AG 119693-119767 GT CAG (GCG) AG 120016-120217 GT AGG (CCA) AG 120400-120484 GT CAG (GAG) AG 120567-120684 GT GGG (GCA) AG 121411-121630 GT CGG (GAT) AG 121799-121886 GT GTG (CAT) AG 122098-122181 GT AGG (GAC) AG 122359-122507 GT AGG (AGA) AG 122619-122701 GT AGG (GGT) AG 122989-123071 GT ACG (ACC) AG 123165-123256 GT TGG (GGT) AG 123481-123767 GG GAG add_exon() Sorry, pasa_asmbl_18231.p1 122359-122507-terminal-2 is invalid. -recovered pasa_asmbl_18231.p1, terminal, 122359, 122507 -recovered pasa_asmbl_18231.p1, terminal, 123481, 123767 -recovered pasa_asmbl_18231.p1, internal, 119693, 119767 -recovered pasa_asmbl_18231.p1, internal, 120016, 120217 -recovered pasa_asmbl_18231.p1, internal, 120400, 120484 -recovered pasa_asmbl_18231.p1, internal, 120567, 120684 -recovered pasa_asmbl_18231.p1, internal, 121411, 121630 -recovered pasa_asmbl_18231.p1, internal, 121799, 121886 -recovered pasa_asmbl_18231.p1, internal, 122098, 122181 -recovered pasa_asmbl_18231.p1, internal, 122359, 122507 -recovered pasa_asmbl_18231.p1, internal, 122619, 122701 -recovered pasa_asmbl_18231.p1, internal, 122989, 123071 -recovered pasa_asmbl_18231.p1, internal, 123165, 123256 Valid prediction for GlimmerHMM_glimmerT_40929-T1 Valid prediction for snap_scaffold_17-snap.2029-T1 Valid prediction for Augustus_model.g27327.t1 Valid prediction for GlimmerHMM_glimmerT_40928-T1 Valid prediction for snap_scaffold_17-snap.2023-T1 Valid prediction for snap_scaffold_17-snap.2044-T1 Sorry, intron length (5) is less than minimum required (10) Valid prediction for GlimmerHMM_glimmerT_40934-T1 Valid prediction for GlimmerHMM_glimmerT_40930-T1 Valid prediction for GlimmerHMM_glimmerT_40938-T1 Valid prediction for snap_scaffold_17-snap.2015-T1 Valid prediction for snap_scaffold_17-snap.2055-T1 Valid prediction for GlimmerHMM_glimmerT_40926-T1 Valid prediction for snap_scaffold_17-snap.2038-T1 Valid prediction for snap_scaffold_17-snap.2018-T1 Valid prediction for snap_scaffold_17-snap.2017-T1 Valid prediction for Augustus_model.g27329.t1 Valid prediction for snap_scaffold_17-snap.2036-T1 Valid prediction for snap_scaffold_17-snap.2035-T1 Valid prediction for snap_scaffold_17-snap.2048-T1 Valid prediction for snap_scaffold_17-snap.2052-T1 Valid prediction for snap_scaffold_17-snap.2057-T1 Valid prediction for snap_scaffold_17-snap.2042-T1 Valid prediction for Augustus_model.g27319.t1 Valid prediction for snap_scaffold_17-snap.2031-T1 Valid prediction for GlimmerHMM_glimmerT_40927-T1 Couldn't classify 100870, 100917 Sorry, prediction pasa_asmbl_18234.p1 fails validation. (CGA) AC 100870-100917 GT AGG (TTG) AG 101008-101118 GT AGG (ATG) AG 101323-101484 GT AGG (GTG) AG 101965-102036 GT ACG (GTG) AG 102315-102460 GT AGG (GAA) AG 102652-102720 GT AGG (GGA) AG 102811-102923 GT AGG (ACG) AG 103314-103546 CA GAC -recovered pasa_asmbl_18234.p1, initial, 101323, 101484 -recovered pasa_asmbl_18234.p1, terminal, 103314, 103546 -recovered pasa_asmbl_18234.p1, internal, 101008, 101118 -recovered pasa_asmbl_18234.p1, internal, 101323, 101484 -recovered pasa_asmbl_18234.p1, internal, 101965, 102036 -recovered pasa_asmbl_18234.p1, internal, 102315, 102460 -recovered pasa_asmbl_18234.p1, internal, 102652, 102720 -recovered pasa_asmbl_18234.p1, internal, 102811, 102923 Valid prediction for snap_scaffold_17-snap.2020-T1 Valid prediction for Augustus_model.g27326.t1 Valid prediction for Augustus_model.g27333.t1 Valid prediction for snap_scaffold_17-snap.2047-T1 Valid prediction for Augustus_model.g27324.t1 Valid prediction for snap_scaffold_17-snap.2059-T1 -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: snap lend_intergenic: 9947, rend_intergenic: 3582 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 16716, rend_intergenic: 12780 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 28254, rend_intergenic: 17720 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 31056, rend_intergenic: 28660 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 37265, rend_intergenic: 34062 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 41099, rend_intergenic: 38156 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 46733, rend_intergenic: 43477 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 50848, rend_intergenic: 46758 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 57726, rend_intergenic: 56053 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 63924, rend_intergenic: 60533 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 82647, rend_intergenic: 68623 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 95194, rend_intergenic: 92672 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 97834, rend_intergenic: 95341 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 101664, rend_intergenic: 97895 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 145369, rend_intergenic: 128435 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 160186, rend_intergenic: 148643 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 171573, rend_intergenic: 166412 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 175592, rend_intergenic: 171653 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 181729, rend_intergenic: 180079 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 187966, rend_intergenic: 185108 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 192389 -exon list size: 476 building trellis 0.2 0.4 0.6 0.8 1.0 1.3 1.5 1.7 1.9 2.1 2.3 2.5 2.7 2.9 3.1 3.3 3.6 3.8 4.0 4.2 4.4 4.6 4.8 5.0 5.2 5.4 5.6 5.9 6.1 6.3 6.5 6.7 6.9 7.1 7.3 7.5 7.7 7.9 8.2 8.4 8.6 8.8 9.0 9.2 9.4 9.6 9.8 10.0 10.3 10.5 10.7 10.9 11.1 11.3 11.5 11.7 11.9 12.1 12.3 12.6 12.8 13.0 13.2 13.4 13.6 13.8 14.0 14.2 14.4 14.6 14.9 15.1 15.3 15.5 15.7 15.9 16.1 16.3 16.5 16.7 16.9 17.2 17.4 17.6 17.8 18.0 18.2 18.4 18.6 18.8 19.0 19.2 19.5 19.7 19.9 20.1 20.3 20.5 20.7 20.9 21.1 21.3 21.5 21.8 22.0 22.2 22.4 22.6 22.8 23.0 23.2 23.4 23.6 23.8 24.1 24.3 24.5 24.7 24.9 25.1 25.3 25.5 25.7 25.9 26.2 26.4 26.6 26.8 27.0 27.2 27.4 27.6 27.8 28.0 28.2 28.5 28.7 28.9 29.1 29.3 29.5 29.7 29.9 30.1 30.3 30.5 30.8 31.0 31.2 31.4 31.6 31.8 32.0 32.2 32.4 32.6 32.8 33.1 33.3 33.5 33.7 33.9 34.1 34.3 34.5 34.7 34.9 35.1 35.4 35.6 35.8 36.0 36.2 36.4 36.6 36.8 37.0 37.2 37.4 37.7 37.9 38.1 38.3 38.5 38.7 38.9 39.1 39.3 39.5 39.7 40.0 40.2 40.4 40.6 40.8 41.0 41.2 41.4 41.6 41.8 42.1 42.3 42.5 42.7 42.9 43.1 43.3 43.5 43.7 43.9 44.1 44.4 44.6 44.8 45.0 45.2 45.4 45.6 45.8 46.0 46.2 46.4 46.7 46.9 47.1 47.3 47.5 47.7 47.9 48.1 48.3 48.5 48.7 49.0 49.2 49.4 49.6 49.8 50.0 50.2 50.4 50.6 50.8 51.0 51.3 51.5 51.7 51.9 52.1 52.3 52.5 52.7 52.9 53.1 53.3 53.6 53.8 54.0 54.2 54.4 54.6 54.8 55.0 55.2 55.4 55.6 55.9 56.1 56.3 56.5 56.7 56.9 57.1 57.3 57.5 57.7 57.9 58.2 58.4 58.6 58.8 59.0 59.2 59.4 59.6 59.8 60.0 60.3 60.5 60.7 60.9 61.1 61.3 61.5 61.7 61.9 62.1 62.3 62.6 62.8 63.0 63.2 63.4 63.6 63.8 64.0 64.2 64.4 64.6 64.9 65.1 65.3 65.5 65.7 65.9 66.1 66.3 66.5 66.7 66.9 67.2 67.4 67.6 67.8 68.0 68.2 68.4 68.6 68.8 69.0 69.2 69.5 69.7 69.9 70.1 70.3 70.5 70.7 70.9 71.1 71.3 71.5 71.8 72.0 72.2 72.4 72.6 72.8 73.0 73.2 73.4 73.6 73.8 74.1 74.3 74.5 74.7 74.9 75.1 75.3 75.5 75.7 75.9 76.2 76.4 76.6 76.8 77.0 77.2 77.4 77.6 77.8 78.0 78.2 78.5 78.7 78.9 79.1 79.3 79.5 79.7 79.9 80.1 80.3 80.5 80.8 81.0 81.2 81.4 81.6 81.8 82.0 82.2 82.4 82.6 82.8 83.1 83.3 83.5 83.7 83.9 84.1 84.3 84.5 84.7 84.9 85.1 85.4 85.6 85.8 86.0 86.2 86.4 86.6 86.8 87.0 87.2 87.4 87.7 87.9 88.1 88.3 88.5 88.7 88.9 89.1 89.3 89.5 89.7 90.0 90.2 90.4 90.6 90.8 91.0 91.2 91.4 91.6 91.8 92.1 92.3 92.5 92.7 92.9 93.1 93.3 93.5 93.7 93.9 94.1 94.4 94.6 94.8 95.0 95.2 95.4 95.6 95.8 96.0 96.2 96.4 96.7 96.9 97.1 97.3 97.5 97.7 97.9 98.1 98.3 98.5 98.7 99.0 99.2 99.4 99.6 99.8 -found 32 predictions from path traversal Error with prediction: snap lend_intergenic: 9947, rend_intergenic: 3582 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 16716, rend_intergenic: 12780 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 28254, rend_intergenic: 17720 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 31056, rend_intergenic: 28660 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 37265, rend_intergenic: 34062 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 41099, rend_intergenic: 38156 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 46733, rend_intergenic: 43477 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 50848, rend_intergenic: 46758 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 57726, rend_intergenic: 56053 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 63924, rend_intergenic: 60533 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 82647, rend_intergenic: 68623 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 95194, rend_intergenic: 92672 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 97834, rend_intergenic: 95341 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 101664, rend_intergenic: 97895 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 145369, rend_intergenic: 128435 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 160186, rend_intergenic: 148643 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 171573, rend_intergenic: 166412 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 175592, rend_intergenic: 171653 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 181729, rend_intergenic: 180079 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 187966, rend_intergenic: 185108 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. GOT 5prime partial gene. -reporting highest scoring path thru the trellis. -found 28 predictions persist after filtering for low support