-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_1667

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)
-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GlimmerHMM_glimmerT_61269-T1
Couldn't classify 949, 1061
Sorry, prediction Augustus_model.g40600.t1 fails validation.
(ATG)	 TC	86-216	GT	TGG
(GTT)	 AG	949-1061	GT	CGG
-recovered Augustus_model.g40600.t1, initial, 86, 216
-recovered Augustus_model.g40600.t1, internal, 949, 1061
Couldn't classify 46, 216
Couldn't classify 949, 1061
Sorry, prediction snap_scaffold_1667-snap.1-T1 fails validation.
(GAG)	 AG	46-216	GT	TGG
(GTT)	 AG	949-1061	GT	CGG
-recovered snap_scaffold_1667-snap.1-T1, internal, 46, 216
-recovered snap_scaffold_1667-snap.1-T1, internal, 949, 1061

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 2076
-exon list size: 7


building trellis

11.1    
22.2    
33.3    
44.4    
55.6    
66.7    
77.8    
88.9    
-found 1 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 1 predictions persist after filtering for low support