-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_166

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_166-snap.5-T1
Valid prediction for GlimmerHMM_glimmerT_59941-T1
Valid prediction for snap_scaffold_166-snap.2-T1
Valid prediction for GlimmerHMM_glimmerT_59940-T1
Valid prediction for Augustus_model.g39697.t1
Valid prediction for snap_scaffold_166-snap.1-T1
Valid prediction for snap_scaffold_166-snap.4-T1
Valid prediction for snap_scaffold_166-snap.3-T1
Valid prediction for Augustus_model.g39698.t1
Valid prediction for GlimmerHMM_glimmerT_59938-T1
Valid prediction for snap_scaffold_166-snap.6-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GlimmerHMM_glimmerT_59939-T1
Valid prediction for Augustus_model.g39696.t1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 11632
-exon list size: 25


building trellis

3.7    
7.4    
11.1    
14.8    
18.5    
22.2    
25.9    
29.6    
33.3    
37.0    
40.7    
44.4    
48.1    
51.9    
55.6    
59.3    
63.0    
66.7    
70.4    
74.1    
77.8    
81.5    
85.2    
88.9    
92.6    
96.3    
-found 4 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 4 predictions persist after filtering for low support