-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_1635

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 547, 693
Couldn't classify 1595, 1669
Sorry, prediction snap_scaffold_1635-snap.1-T1 fails validation.
(ACT)	 AG	547-693	GT	CGG
(GGT)	 AG	1218-1320	GT	GGG
(ACG)	 AG	1595-1669	GT	TGG
-recovered snap_scaffold_1635-snap.1-T1, internal, 547, 693
-recovered snap_scaffold_1635-snap.1-T1, internal, 1218, 1320
-recovered snap_scaffold_1635-snap.1-T1, internal, 1595, 1669

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)
-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 2112
-exon list size: 6


building trellis

12.5    
25.0    
37.5    
50.0    
62.5    
75.0    
87.5    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support