-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_16/scaffold_16_5407117-5612115

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_16-snap.1054-T1
Valid prediction for CodingQuarry_transcript_19967-T1
Valid prediction for GlimmerHMM_glimmerT_38364-T1
Valid prediction for GlimmerHMM_glimmerT_38371-T1
Valid prediction for snap_scaffold_16-snap.1077-T1
Valid prediction for snap_scaffold_16-snap.1086-T1
Valid prediction for snap_scaffold_16-snap.1060-T1
Valid prediction for snap_scaffold_16-snap.1093-T1
Valid prediction for snap_scaffold_16-snap.1065-T1
Valid prediction for GlimmerHMM_glimmerT_38353-T1
Valid prediction for snap_scaffold_16-snap.1058-T1
Valid prediction for Augustus_model.g25606.t1
Valid prediction for GlimmerHMM_glimmerT_38359-T1
Valid prediction for pasa_asmbl_16219.p1
Valid prediction for GlimmerHMM_glimmerT_38374-T1
Valid prediction for snap_scaffold_16-snap.1043-T1
Valid prediction for snap_scaffold_16-snap.1073-T1
Valid prediction for snap_scaffold_16-snap.1091-T1
Valid prediction for HiQ_model.g25591.t1
Valid prediction for snap_scaffold_16-snap.1051-T1
Valid prediction for snap_scaffold_16-snap.1083-T1
Valid prediction for snap_scaffold_16-snap.1066-T1
Valid prediction for Augustus_model.g25597.t1
Valid prediction for snap_scaffold_16-snap.1047-T1
Valid prediction for GlimmerHMM_glimmerT_38375-T1
Valid prediction for snap_scaffold_16-snap.1061-T1
Valid prediction for GlimmerHMM_glimmerT_38373-T1
Valid prediction for Augustus_model.g25598.t1
Valid prediction for snap_scaffold_16-snap.1057-T1
Valid prediction for GlimmerHMM_glimmerT_38356-T1
Valid prediction for GlimmerHMM_glimmerT_38378-T1
Valid prediction for GlimmerHMM_glimmerT_38350-T1
Valid prediction for snap_scaffold_16-snap.1087-T1
Valid prediction for snap_scaffold_16-snap.1044-T1
Valid prediction for snap_scaffold_16-snap.1080-T1
Valid prediction for snap_scaffold_16-snap.1068-T1
Valid prediction for Augustus_model.g25592.t1
Valid prediction for snap_scaffold_16-snap.1063-T1
Valid prediction for GlimmerHMM_glimmerT_38346-T1
Valid prediction for GlimmerHMM_glimmerT_38351-T1
Valid prediction for Augustus_model.g25596.t1
Couldn't classify 2560, 2625
Sorry, prediction pasa_asmbl_16215.p1 fails validation.
(GCG)	 TG	2560-2625	GT	TGG
(GAT)	 AG	3291-3354	GT	CGG
(GCA)	 AG	3456-3583	GT	AGG
(GTT)	 AG	3687-3808	GT	AGG
(GCA)	 AG	4046-4140	GT	AGG
(CTG)	 AG	4532-4690	GT	GGG
(GCA)	 AG	4924-5058	GT	TGG
(TGA)	 AG	5139-5233	GT	AGG
(GTG)	 AG	5335-5479	GT	CGG
(GTG)	 AG	5617-5786	GT	AGG
(GTC)	 AG	5961-6133	GT	CGG
(GCT)	 AG	6297-6360	GT	GAG
add_exon() Sorry, pasa_asmbl_16215.p1 4046-4140-terminal-2 is invalid.
-recovered pasa_asmbl_16215.p1, terminal, 4046, 4140
-recovered pasa_asmbl_16215.p1, terminal, 6297, 6360
-recovered pasa_asmbl_16215.p1, internal, 3291, 3354
-recovered pasa_asmbl_16215.p1, internal, 3456, 3583
-recovered pasa_asmbl_16215.p1, internal, 3687, 3808
-recovered pasa_asmbl_16215.p1, internal, 4046, 4140
-recovered pasa_asmbl_16215.p1, internal, 4532, 4690
-recovered pasa_asmbl_16215.p1, internal, 4924, 5058
-recovered pasa_asmbl_16215.p1, internal, 5139, 5233
-recovered pasa_asmbl_16215.p1, internal, 5335, 5479
-recovered pasa_asmbl_16215.p1, internal, 5617, 5786
-recovered pasa_asmbl_16215.p1, internal, 5961, 6133
-recovered pasa_asmbl_16215.p1, internal, 6297, 6360
Valid prediction for snap_scaffold_16-snap.1053-T1
Valid prediction for snap_scaffold_16-snap.1050-T1
Valid prediction for CodingQuarry_transcript_19970-T1
Valid prediction for Augustus_model.g25612.t1
Valid prediction for snap_scaffold_16-snap.1078-T1
Valid prediction for snap_scaffold_16-snap.1084-T1
Valid prediction for Augustus_model.g25599.t1
Valid prediction for snap_scaffold_16-snap.1069-T1
Valid prediction for GlimmerHMM_glimmerT_38352-T1
Valid prediction for GlimmerHMM_glimmerT_38345-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GlimmerHMM_glimmerT_38363-T1
Valid prediction for snap_scaffold_16-snap.1045-T1
Valid prediction for snap_scaffold_16-snap.1046-T1
Valid prediction for snap_scaffold_16-snap.1076-T1
Valid prediction for snap_scaffold_16-snap.1074-T1
Valid prediction for Augustus_model.g25611.t1
Valid prediction for GlimmerHMM_glimmerT_38369-T1
Valid prediction for snap_scaffold_16-snap.1062-T1
Valid prediction for GlimmerHMM_glimmerT_38348-T1
Valid prediction for snap_scaffold_16-snap.1052-T1
Valid prediction for Augustus_model.g25601.t1
Valid prediction for snap_scaffold_16-snap.1088-T1
Valid prediction for GlimmerHMM_glimmerT_38368-T1
Valid prediction for GlimmerHMM_glimmerT_38361-T1
Valid prediction for snap_scaffold_16-snap.1075-T1
Valid prediction for snap_scaffold_16-snap.1049-T1
Valid prediction for GlimmerHMM_glimmerT_38365-T1
Couldn't classify 97564, 97689
Sorry, prediction pasa_asmbl_17122.p1 fails validation.
(CCC)	 CT	97564-97689	GT	AGG
(AGC)	 AG	99124-99201	GT	GGG
(GTC)	 AG	99546-99659	GT	AGG
(AAC)	 AG	101801-101926	GT	AGG
(ACT)	 AG	103366-103581	CA	AGC
-recovered pasa_asmbl_17122.p1, terminal, 103366, 103581
-recovered pasa_asmbl_17122.p1, internal, 99124, 99201
-recovered pasa_asmbl_17122.p1, internal, 99546, 99659
-recovered pasa_asmbl_17122.p1, internal, 101801, 101926
Valid prediction for GlimmerHMM_glimmerT_38347-T1
Valid prediction for snap_scaffold_16-snap.1090-T1
Valid prediction for Augustus_model.g25609.t1
Valid prediction for snap_scaffold_16-snap.1071-T1
Valid prediction for Augustus_model.g25594.t1
Valid prediction for GlimmerHMM_glimmerT_38372-T1
Valid prediction for GlimmerHMM_glimmerT_38360-T1
Valid prediction for GlimmerHMM_glimmerT_38377-T1
Valid prediction for snap_scaffold_16-snap.1085-T1
Valid prediction for snap_scaffold_16-snap.1082-T1
Valid prediction for pasa_asmbl_17108.p1
Valid prediction for snap_scaffold_16-snap.1092-T1
Valid prediction for Augustus_model.g25603.t1
Valid prediction for HiQ_model.g25604.t1
Valid prediction for Augustus_model.g25614.t1
Valid prediction for Augustus_model.g25593.t1
Valid prediction for snap_scaffold_16-snap.1048-T1
Couldn't classify 113639, 113718
Couldn't classify 115856, 115925
Sorry, prediction pasa_asmbl_17114.p1 fails validation.
(AGA)	 TG	113639-113718	GT	GGG
(GGA)	 AG	113884-114006	GT	AGG
(GGG)	 AG	114468-114657	GT	AGG
(GCG)	 AG	115044-115285	GT	AAG
(GTA)	 AG	115451-115526	GT	TGG
(TAT)	 AG	115631-115758	GT	GAG
(GGC)	 AG	115856-115925	TG	ACT
-recovered pasa_asmbl_17114.p1, internal, 113884, 114006
-recovered pasa_asmbl_17114.p1, internal, 114468, 114657
-recovered pasa_asmbl_17114.p1, internal, 115044, 115285
-recovered pasa_asmbl_17114.p1, internal, 115451, 115526
-recovered pasa_asmbl_17114.p1, internal, 115631, 115758
Valid prediction for GlimmerHMM_glimmerT_38355-T1
Valid prediction for snap_scaffold_16-snap.1079-T1
Couldn't classify 116058, 116096
Sorry, prediction pasa_asmbl_17112.p1 fails validation.
(TAC)	 CC	116058-116096	GT	GGG
(GGG)	 AG	116249-116374	GT	TGG
(AAG)	 AG	116482-116597	GT	AGG
(TTA)	 AG	116948-117116	AT	GAA
-recovered pasa_asmbl_17112.p1, terminal, 116948, 117116
-recovered pasa_asmbl_17112.p1, internal, 116249, 116374
-recovered pasa_asmbl_17112.p1, internal, 116482, 116597
Valid prediction for Augustus_model.g25595.t1
Couldn't classify 74549, 74747
Couldn't classify 78575, 78626
Sorry, prediction pasa_asmbl_17127.p1 fails validation.
(CAG)	 TC	74549-74747	GT	GGG
(GTG)	 AG	77516-77714	GT	AGG
(GAA)	 AG	78575-78626	GC	AGG
-recovered pasa_asmbl_17127.p1, internal, 77516, 77714
-recovered pasa_asmbl_17127.p1, internal, 78575, 78626
Valid prediction for CodingQuarry_transcript_19968-T1
Valid prediction for GlimmerHMM_glimmerT_38379-T1
Valid prediction for HiQ_model.g25605.t1
Valid prediction for snap_scaffold_16-snap.1094-T1
Couldn't classify 94422, 94507
Couldn't classify 96433, 96680
Sorry, prediction pasa_asmbl_17125.p1 fails validation.
(AAG)	 TC	94422-94507	GT	AGG
(ATA)	 AG	95324-95861	GT	AGG
(GCA)	 AG	96073-96283	GT	AGG
(AAG)	 AG	96433-96680	CC	CCC
-recovered pasa_asmbl_17125.p1, internal, 95324, 95861
-recovered pasa_asmbl_17125.p1, internal, 96073, 96283
Valid prediction for snap_scaffold_16-snap.1056-T1
Valid prediction for snap_scaffold_16-snap.1089-T1
Valid prediction for GlimmerHMM_glimmerT_38370-T1
Valid prediction for CodingQuarry_transcript_19969-T1
Valid prediction for GlimmerHMM_glimmerT_38362-T1
Valid prediction for GlimmerHMM_glimmerT_38376-T1
Couldn't classify 111504, 111596
Couldn't classify 113112, 113147
Sorry, prediction pasa_asmbl_17116.p1 fails validation.
(TCC)	 AG	111504-111596	GT	AGG
(CTC)	 AG	111736-111879	GT	AGG
(CAG)	 AG	112063-112160	GT	AGG
(ACT)	 AG	112370-112472	GT	AGG
(GAG)	 AG	112602-112684	GT	GGG
(GTC)	 AG	112805-112937	GT	AGG
(ATG)	 AG	113112-113147	AG	TGA
-recovered pasa_asmbl_17116.p1, internal, 111504, 111596
-recovered pasa_asmbl_17116.p1, internal, 111736, 111879
-recovered pasa_asmbl_17116.p1, internal, 112063, 112160
-recovered pasa_asmbl_17116.p1, internal, 112370, 112472
-recovered pasa_asmbl_17116.p1, internal, 112602, 112684
-recovered pasa_asmbl_17116.p1, internal, 112805, 112937
Valid prediction for GlimmerHMM_glimmerT_38366-T1
Valid prediction for GlimmerHMM_glimmerT_38349-T1
Couldn't classify 109855, 109954
Sorry, prediction pasa_asmbl_17117.p1 fails validation.
(ATG)	 CC	108497-108553	GT	AGG
(ATC)	 AG	108654-108804	GT	AGG
(CTG)	 AG	108923-109075	GT	AGG
(ACG)	 AG	109238-109371	GT	GGG
(AGG)	 AG	109484-109644	GT	AGG
(CTC)	 AG	109855-109954	CC	GCC
-recovered pasa_asmbl_17117.p1, initial, 108497, 108553
-recovered pasa_asmbl_17117.p1, internal, 108654, 108804
-recovered pasa_asmbl_17117.p1, internal, 108923, 109075
-recovered pasa_asmbl_17117.p1, internal, 109238, 109371
-recovered pasa_asmbl_17117.p1, internal, 109484, 109644
Valid prediction for snap_scaffold_16-snap.1055-T1
Couldn't classify 136250, 136342
Couldn't classify 138041, 138212
Sorry, prediction pasa_asmbl_17107.p1 fails validation.
(ACA)	 TG	136250-136342	GT	AGG
(GTG)	 AG	136417-136598	GT	TGG
(GTG)	 AG	137297-137423	GT	AGG
(ATC)	 AG	137558-137704	GT	AGG
(AAC)	 AG	137849-137943	GT	AGG
(AGC)	 AG	138041-138212	GG	GGG
-recovered pasa_asmbl_17107.p1, internal, 136417, 136598
-recovered pasa_asmbl_17107.p1, internal, 137297, 137423
-recovered pasa_asmbl_17107.p1, internal, 137558, 137704
-recovered pasa_asmbl_17107.p1, internal, 137849, 137943
Valid prediction for snap_scaffold_16-snap.1067-T1
Valid prediction for GlimmerHMM_glimmerT_38357-T1
Couldn't classify 189057, 189258
Sorry, prediction pasa_asmbl_17101.p1 fails validation.
(GAC)	 AG	189057-189258	GT	AGG
(GAG)	 AG	189382-189541	GT	AGG
(ACT)	 AG	189641-189819	GT	GGG
(GCG)	 AG	189949-190035	GT	AGG
(GGG)	 AG	190486-190569	GT	CGG
(GTC)	 AG	190748-191121	CC	GAC
-recovered pasa_asmbl_17101.p1, terminal, 190748, 191121
-recovered pasa_asmbl_17101.p1, internal, 189057, 189258
-recovered pasa_asmbl_17101.p1, internal, 189382, 189541
-recovered pasa_asmbl_17101.p1, internal, 189641, 189819
-recovered pasa_asmbl_17101.p1, internal, 189949, 190035
-recovered pasa_asmbl_17101.p1, internal, 190486, 190569
Valid prediction for GlimmerHMM_glimmerT_38358-T1
Valid prediction for Augustus_model.g25608.t1
Valid prediction for snap_scaffold_16-snap.1064-T1
Valid prediction for GlimmerHMM_glimmerT_38367-T1
Valid prediction for snap_scaffold_16-snap.1081-T1
Valid prediction for snap_scaffold_16-snap.1059-T1
Valid prediction for Augustus_model.g25600.t1
Valid prediction for snap_scaffold_16-snap.1070-T1
Valid prediction for Augustus_model.g25610.t1
Couldn't classify 101753, 101926
Couldn't classify 103039, 103263
Sorry, prediction pasa_asmbl_17120.p1 fails validation.
(TTT)	 AT	101753-101926	GT	AGG
(GCT)	 AG	103039-103263	TC	GCT
Valid prediction for Augustus_model.g25613.t1
Valid prediction for Augustus_model.g25607.t1
Valid prediction for Augustus_model.g25602.t1
Valid prediction for GlimmerHMM_glimmerT_38354-T1
Couldn't classify 188315, 188963
Sorry, prediction pasa_asmbl_17102.p1 fails validation.
(ATG)	 AA	187079-187083	GT	AGG
(CAT)	 AG	187841-188140	GT	AGG
(TGA)	 AG	188315-188963	AG	GGA
-recovered pasa_asmbl_17102.p1, initial, 187079, 187083
-recovered pasa_asmbl_17102.p1, internal, 187841, 188140
Valid prediction for pasa_asmbl_17104.p1
Couldn't classify 140234, 140365
Sorry, prediction pasa_asmbl_17106.p1 fails validation.
(GGA)	 AT	140234-140365	GT	AGG
(GTG)	 AG	140572-140667	GT	AGG
(GTT)	 AG	140789-140910	GT	AGG
(GCA)	 AG	141118-141124	AG	GAA
-recovered pasa_asmbl_17106.p1, terminal, 141118, 141124
-recovered pasa_asmbl_17106.p1, internal, 140572, 140667
-recovered pasa_asmbl_17106.p1, internal, 140789, 140910
Valid prediction for snap_scaffold_16-snap.1072-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 17122, rend_intergenic: 13901  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 26083, rend_intergenic: 24695  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 28376, rend_intergenic: 26627  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 46408, rend_intergenic: 40508  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 50280, rend_intergenic: 49506  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 60349, rend_intergenic: 51176  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 65001, rend_intergenic: 63538  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 70618, rend_intergenic: 66893  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 78490, rend_intergenic: 73950  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 97126, rend_intergenic: 87947  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 115068, rend_intergenic: 110818  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 142235, rend_intergenic: 127367  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 153294, rend_intergenic: 147693  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 158923, rend_intergenic: 154499  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 164687, rend_intergenic: 161179  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 175188, rend_intergenic: 174337  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 182984, rend_intergenic: 180444  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 192478, rend_intergenic: 190636  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 199759, rend_intergenic: 198565  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 204999
-exon list size: 505


building trellis

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49.3    
49.5    
49.7    
49.9    
50.1    
50.3    
50.5    
50.7    
50.9    
51.1    
51.3    
51.5    
51.7    
51.9    
52.1    
52.3    
52.5    
52.7    
52.9    
53.1    
53.3    
53.5    
53.6    
53.8    
54.0    
54.2    
54.4    
54.6    
54.8    
55.0    
55.2    
55.4    
55.6    
55.8    
56.0    
56.2    
56.4    
56.6    
56.8    
57.0    
57.2    
57.4    
57.6    
57.8    
58.0    
58.2    
58.4    
58.6    
58.8    
59.0    
59.2    
59.4    
59.6    
59.8    
60.0    
60.2    
60.4    
60.6    
60.7    
60.9    
61.1    
61.3    
61.5    
61.7    
61.9    
62.1    
62.3    
62.5    
62.7    
62.9    
63.1    
63.3    
63.5    
63.7    
63.9    
64.1    
64.3    
64.5    
64.7    
64.9    
65.1    
65.3    
65.5    
65.7    
65.9    
66.1    
66.3    
66.5    
66.7    
66.9    
67.1    
67.3    
67.5    
67.7    
67.9    
68.0    
68.2    
68.4    
68.6    
68.8    
69.0    
69.2    
69.4    
69.6    
69.8    
70.0    
70.2    
70.4    
70.6    
70.8    
71.0    
71.2    
71.4    
71.6    
71.8    
72.0    
72.2    
72.4    
72.6    
72.8    
73.0    
73.2    
73.4    
73.6    
73.8    
74.0    
74.2    
74.4    
74.6    
74.8    
75.0    
75.1    
75.3    
75.5    
75.7    
75.9    
76.1    
76.3    
76.5    
76.7    
76.9    
77.1    
77.3    
77.5    
77.7    
77.9    
78.1    
78.3    
78.5    
78.7    
78.9    
79.1    
79.3    
79.5    
79.7    
79.9    
80.1    
80.3    
80.5    
80.7    
80.9    
81.1    
81.3    
81.5    
81.7    
81.9    
82.1    
82.2    
82.4    
82.6    
82.8    
83.0    
83.2    
83.4    
83.6    
83.8    
84.0    
84.2    
84.4    
84.6    
84.8    
85.0    
85.2    
85.4    
85.6    
85.8    
86.0    
86.2    
86.4    
86.6    
86.8    
87.0    
87.2    
87.4    
87.6    
87.8    
88.0    
88.2    
88.4    
88.6    
88.8    
89.0    
89.2    
89.3    
89.5    
89.7    
89.9    
90.1    
90.3    
90.5    
90.7    
90.9    
91.1    
91.3    
91.5    
91.7    
91.9    
92.1    
92.3    
92.5    
92.7    
92.9    
93.1    
93.3    
93.5    
93.7    
93.9    
94.1    
94.3    
94.5    
94.7    
94.9    
95.1    
95.3    
95.5    
95.7    
95.9    
96.1    
96.3    
96.4    
96.6    
96.8    
97.0    
97.2    
97.4    
97.6    
97.8    
98.0    
98.2    
98.4    
98.6    
98.8    
99.0    
99.2    
99.4    
99.6    
99.8    
-found 37 predictions from path traversal
Error with prediction: snap lend_intergenic: 17122, rend_intergenic: 13901  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 26083, rend_intergenic: 24695  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 28376, rend_intergenic: 26627  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 46408, rend_intergenic: 40508  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 50280, rend_intergenic: 49506  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 60349, rend_intergenic: 51176  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 65001, rend_intergenic: 63538  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 70618, rend_intergenic: 66893  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 78490, rend_intergenic: 73950  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 97126, rend_intergenic: 87947  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 115068, rend_intergenic: 110818  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 142235, rend_intergenic: 127367  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 153294, rend_intergenic: 147693  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 158923, rend_intergenic: 154499  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 164687, rend_intergenic: 161179  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 175188, rend_intergenic: 174337  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 182984, rend_intergenic: 180444  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 192478, rend_intergenic: 190636  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 199759, rend_intergenic: 198565  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 29 predictions persist after filtering for low support