-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_16/scaffold_16_228629-565045

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_16-snap.62-T1
Valid prediction for snap_scaffold_16-snap.99-T1
Valid prediction for Augustus_model.g25123.t1
Valid prediction for snap_scaffold_16-snap.60-T1
Valid prediction for snap_scaffold_16-snap.51-T1
Valid prediction for snap_scaffold_16-snap.65-T1
Valid prediction for snap_scaffold_16-snap.78-T1
Valid prediction for Augustus_model.g25094.t1
Valid prediction for Augustus_model.g25126.t1
Valid prediction for Augustus_model.g25110.t1
Valid prediction for GlimmerHMM_glimmerT_37708-T1
Valid prediction for Augustus_model.g25121.t1
Valid prediction for snap_scaffold_16-snap.61-T1
Valid prediction for snap_scaffold_16-snap.39-T1
Valid prediction for HiQ_model.g25103.t1
Valid prediction for snap_scaffold_16-snap.42-T1
Valid prediction for Augustus_model.g25108.t1
Valid prediction for GlimmerHMM_glimmerT_37692-T1
Valid prediction for GlimmerHMM_glimmerT_37709-T1
Valid prediction for snap_scaffold_16-snap.45-T1
Valid prediction for snap_scaffold_16-snap.37-T1
Valid prediction for Augustus_model.g25114.t1
Valid prediction for Augustus_model.g25122.t1
Valid prediction for snap_scaffold_16-snap.87-T1
Valid prediction for snap_scaffold_16-snap.71-T1
Valid prediction for GlimmerHMM_glimmerT_37704-T1
Valid prediction for GlimmerHMM_glimmerT_37696-T1
Valid prediction for snap_scaffold_16-snap.64-T1
Valid prediction for GlimmerHMM_glimmerT_37706-T1
Valid prediction for snap_scaffold_16-snap.91-T1
Valid prediction for Augustus_model.g25100.t1
Valid prediction for GlimmerHMM_glimmerT_37701-T1
Valid prediction for Augustus_model.g25095.t1
Valid prediction for GlimmerHMM_glimmerT_37680-T1
Valid prediction for GlimmerHMM_glimmerT_37683-T1
Valid prediction for pasa_asmbl_16017.p1
Valid prediction for snap_scaffold_16-snap.83-T1
Valid prediction for snap_scaffold_16-snap.89-T1
Valid prediction for snap_scaffold_16-snap.98-T1
Valid prediction for Augustus_model.g25118.t1
Valid prediction for snap_scaffold_16-snap.44-T1
Valid prediction for pasa_asmbl_16024.p1
Valid prediction for GlimmerHMM_glimmerT_37695-T1
Valid prediction for GlimmerHMM_glimmerT_37676-T1
Valid prediction for snap_scaffold_16-snap.75-T1
Valid prediction for HiQ_model.g25098.t1
Valid prediction for GlimmerHMM_glimmerT_37681-T1
Valid prediction for CodingQuarry_transcript_19876-T1
Valid prediction for snap_scaffold_16-snap.46-T1
Valid prediction for snap_scaffold_16-snap.84-T1
Valid prediction for GlimmerHMM_glimmerT_37685-T1
Valid prediction for snap_scaffold_16-snap.63-T1
Valid prediction for snap_scaffold_16-snap.54-T1
Valid prediction for GlimmerHMM_glimmerT_37705-T1
Valid prediction for GlimmerHMM_glimmerT_37707-T1
Valid prediction for GlimmerHMM_glimmerT_37688-T1
Valid prediction for Augustus_model.g25120.t1
Valid prediction for snap_scaffold_16-snap.85-T1
Valid prediction for GlimmerHMM_glimmerT_37677-T1
Valid prediction for GlimmerHMM_glimmerT_37691-T1
Valid prediction for snap_scaffold_16-snap.92-T1
Sorry, intron length (4) is less than minimum required (10)
Valid prediction for GlimmerHMM_glimmerT_37679-T1
Valid prediction for GlimmerHMM_glimmerT_37699-T1
Valid prediction for GlimmerHMM_glimmerT_37674-T1
Valid prediction for snap_scaffold_16-snap.48-T1
Valid prediction for snap_scaffold_16-snap.73-T1
Valid prediction for CodingQuarry_transcript_19875-T1
Valid prediction for Augustus_model.g25097.t1
Valid prediction for GlimmerHMM_glimmerT_37675-T1
Valid prediction for snap_scaffold_16-snap.72-T1
Valid prediction for snap_scaffold_16-snap.66-T1
Valid prediction for Augustus_model.g25125.t1
Valid prediction for GlimmerHMM_glimmerT_37710-T1
Valid prediction for snap_scaffold_16-snap.69-T1
Valid prediction for snap_scaffold_16-snap.93-T1
Valid prediction for snap_scaffold_16-snap.38-T1
Couldn't classify 51773, 51945
Couldn't classify 57239, 57257
Sorry, prediction pasa_asmbl_16014.p1 fails validation.
(CCT)	 AC	51773-51945	GT	AGG
(AGG)	 AG	52133-52222	GT	CAG
(GAT)	 AG	52323-52441	GT	GGG
(GTC)	 AG	52526-52597	GT	CAG
(TGG)	 AG	52773-52876	GT	AGG
(TTT)	 AG	54350-54500	GT	AGG
(GCC)	 AG	54572-54637	GT	AGG
(ACA)	 AG	54718-54884	GT	AGG
(GGT)	 AG	55091-55218	GT	AGG
(GGA)	 AG	57012-57167	GT	AGG
(TGA)	 AG	57239-57257	GC	CAG
-recovered pasa_asmbl_16014.p1, internal, 52133, 52222
-recovered pasa_asmbl_16014.p1, internal, 52323, 52441
-recovered pasa_asmbl_16014.p1, internal, 52526, 52597
-recovered pasa_asmbl_16014.p1, internal, 52773, 52876
-recovered pasa_asmbl_16014.p1, internal, 54350, 54500
-recovered pasa_asmbl_16014.p1, internal, 54572, 54637
-recovered pasa_asmbl_16014.p1, internal, 54718, 54884
-recovered pasa_asmbl_16014.p1, internal, 55091, 55218
-recovered pasa_asmbl_16014.p1, internal, 57012, 57167
-recovered pasa_asmbl_16014.p1, internal, 57239, 57257
Valid prediction for GlimmerHMM_glimmerT_37693-T1
Valid prediction for snap_scaffold_16-snap.97-T1
Sorry, intron length (4) is less than minimum required (10)
Valid prediction for snap_scaffold_16-snap.57-T1
Valid prediction for Augustus_model.g25119.t1
Valid prediction for snap_scaffold_16-snap.95-T1
Valid prediction for pasa_asmbl_16016.p1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for pasa_asmbl_16847.p1
Valid prediction for pasa_asmbl_17583.p1
Valid prediction for Augustus_model.g25105.t1
Valid prediction for snap_scaffold_16-snap.81-T1
Valid prediction for GlimmerHMM_glimmerT_37684-T1
Valid prediction for GlimmerHMM_glimmerT_37700-T1
Valid prediction for CodingQuarry_transcript_19880-T1
Couldn't classify 148580, 148831
Sorry, prediction pasa_asmbl_16868.p1 fails validation.
(TTG)	 GA	148580-148831	GT	ATG
(ATG)	 AG	148911-148991	GT	AGG
(GTG)	 AG	149105-149194	GT	CGG
(TTC)	 AG	149305-149412	GT	AGG
(ATC)	 AG	149497-149607	TG	AGT
-recovered pasa_asmbl_16868.p1, initial, 148911, 148991
-recovered pasa_asmbl_16868.p1, terminal, 149497, 149607
-recovered pasa_asmbl_16868.p1, internal, 148911, 148991
-recovered pasa_asmbl_16868.p1, internal, 149105, 149194
-recovered pasa_asmbl_16868.p1, internal, 149305, 149412
Valid prediction for snap_scaffold_16-snap.56-T1
Valid prediction for snap_scaffold_16-snap.90-T1
Valid prediction for snap_scaffold_16-snap.58-T1
Valid prediction for HiQ_model.g25102.t1
Valid prediction for snap_scaffold_16-snap.49-T1
Valid prediction for snap_scaffold_16-snap.79-T1
Valid prediction for Augustus_model.g25116.t1
Valid prediction for GlimmerHMM_glimmerT_37690-T1
Valid prediction for snap_scaffold_16-snap.74-T1
Valid prediction for pasa_asmbl_16880.p1
Valid prediction for pasa_asmbl_16861.p1
Couldn't classify 237235, 237236
Sorry, prediction CodingQuarry_transcript_19877-T1 fails validation.
(ATG)	 GG	237235-237236	GT	ATG
(GTG)	 AG	237413-237528	GT	CGG
(GCA)	 AG	237896-238017	GT	AGG
(GAA)	 AG	238107-238229	GT	AGG
(GTT)	 AG	238288-238475	GT	AGG
(AGA)	 AG	238592-238736	GT	AGG
(GGA)	 AG	238837-238980	GT	AGG
(CTT)	 AG	239110-239295	GT	AGG
(GTC)	 AG	239377-239445	GT	ACG
(ACG)	 AG	239542-239656	GT	TGG
(CTG)	 AG	239741-239868	GT	AGG
(ATT)	 AG	239953-240047	GT	AGG
(GCA)	 AG	240125-240274	GT	TGG
(GTG)	 AG	240348-240450	TT	GAT
add_exon() Sorry, CodingQuarry_transcript_19877-T1 238288-238475-terminal-2 is invalid.
-recovered CodingQuarry_transcript_19877-T1, terminal, 238288, 238475
-recovered CodingQuarry_transcript_19877-T1, terminal, 240348, 240450
-recovered CodingQuarry_transcript_19877-T1, internal, 237413, 237528
-recovered CodingQuarry_transcript_19877-T1, internal, 237896, 238017
-recovered CodingQuarry_transcript_19877-T1, internal, 238107, 238229
-recovered CodingQuarry_transcript_19877-T1, internal, 238288, 238475
-recovered CodingQuarry_transcript_19877-T1, internal, 238592, 238736
-recovered CodingQuarry_transcript_19877-T1, internal, 238837, 238980
-recovered CodingQuarry_transcript_19877-T1, internal, 239110, 239295
-recovered CodingQuarry_transcript_19877-T1, internal, 239377, 239445
-recovered CodingQuarry_transcript_19877-T1, internal, 239542, 239656
-recovered CodingQuarry_transcript_19877-T1, internal, 239741, 239868
-recovered CodingQuarry_transcript_19877-T1, internal, 239953, 240047
-recovered CodingQuarry_transcript_19877-T1, internal, 240125, 240274
Valid prediction for snap_scaffold_16-snap.50-T1
Valid prediction for HiQ_model.g25101.t1
Valid prediction for HiQ_model.g25112.t1
Valid prediction for snap_scaffold_16-snap.40-T1
Valid prediction for HiQ_model.g25117.t1
Valid prediction for snap_scaffold_16-snap.80-T1
Valid prediction for snap_scaffold_16-snap.47-T1
Valid prediction for pasa_asmbl_16864.p1
Valid prediction for GlimmerHMM_glimmerT_37689-T1
Valid prediction for GlimmerHMM_glimmerT_37697-T1
Valid prediction for snap_scaffold_16-snap.67-T1
Valid prediction for CodingQuarry_transcript_19872-T1
Valid prediction for snap_scaffold_16-snap.43-T1
Valid prediction for snap_scaffold_16-snap.55-T1
Valid prediction for HiQ_model.g25104.t1
Valid prediction for GlimmerHMM_glimmerT_37686-T1
Valid prediction for snap_scaffold_16-snap.86-T1
Valid prediction for snap_scaffold_16-snap.59-T1
Valid prediction for snap_scaffold_16-snap.77-T1
Valid prediction for GlimmerHMM_glimmerT_37687-T1
Valid prediction for CodingQuarry_transcript_19883-T1
Valid prediction for snap_scaffold_16-snap.76-T1
Valid prediction for snap_scaffold_16-snap.70-T1
Valid prediction for snap_scaffold_16-snap.94-T1
Valid prediction for snap_scaffold_16-snap.52-T1
Valid prediction for CodingQuarry_transcript_19874-T1
Valid prediction for GlimmerHMM_glimmerT_37678-T1
Valid prediction for Augustus_model.g25096.t1
Valid prediction for GlimmerHMM_glimmerT_37703-T1
Couldn't classify 121059, 121227
Sorry, prediction pasa_asmbl_16882.p1 fails validation.
(GAT)	 TA	121059-121227	GT	AGG
(GTA)	 AG	122413-122481	GC	TGG
(GCC)	 AG	123055-123287	TA	AAT
-recovered pasa_asmbl_16882.p1, terminal, 123055, 123287
-recovered pasa_asmbl_16882.p1, internal, 122413, 122481
Valid prediction for GlimmerHMM_glimmerT_37694-T1
Valid prediction for GlimmerHMM_glimmerT_37682-T1
Valid prediction for CodingQuarry_transcript_19882-T1
Valid prediction for snap_scaffold_16-snap.82-T1
Valid prediction for HiQ_model.g25111.t1
Valid prediction for CodingQuarry_transcript_19873-T1
Valid prediction for Augustus_model.g25109.t1
Couldn't classify 261348, 261497
Sorry, prediction pasa_asmbl_16848.p1 fails validation.
(ATC)	 GT	261348-261497	GT	TGG
(GTC)	 AG	261592-261720	GT	AGG
(CTG)	 AG	261948-262089	GT	AGG
(AGT)	 AG	262173-262336	GT	GAG
-recovered pasa_asmbl_16848.p1, terminal, 262173, 262336
-recovered pasa_asmbl_16848.p1, internal, 261592, 261720
-recovered pasa_asmbl_16848.p1, internal, 261948, 262089
-recovered pasa_asmbl_16848.p1, internal, 262173, 262336
Valid prediction for Augustus_model.g25113.t1
Valid prediction for snap_scaffold_16-snap.96-T1
Sorry, intron length (4) is less than minimum required (10)
Valid prediction for snap_scaffold_16-snap.68-T1
Valid prediction for HiQ_model.g25115.t1
Couldn't classify 237235, 237236
Sorry, prediction CodingQuarry_transcript_19878-T1 fails validation.
(ATG)	 GG	237235-237236	GT	ATG
(GTG)	 AG	237413-237528	GT	CGG
(GCA)	 AG	237896-238017	GT	AGG
(GAA)	 AG	238107-238229	GT	AGG
(GTT)	 AG	238288-238475	GT	AGG
(AGA)	 AG	238592-238736	GT	AGG
(GGA)	 AG	238837-238980	GT	AGG
(CTT)	 AG	239110-239295	GT	AGG
(ACG)	 AG	239542-239656	GT	TGG
(CTG)	 AG	239741-239868	GT	AGG
(ATT)	 AG	239953-240047	GT	AGG
(GCA)	 AG	240125-240274	GT	TGG
(GTG)	 AG	240348-240450	TT	GAT
add_exon() Sorry, CodingQuarry_transcript_19878-T1 238288-238475-terminal-2 is invalid.
-recovered CodingQuarry_transcript_19878-T1, terminal, 238288, 238475
-recovered CodingQuarry_transcript_19878-T1, terminal, 240348, 240450
-recovered CodingQuarry_transcript_19878-T1, internal, 237413, 237528
-recovered CodingQuarry_transcript_19878-T1, internal, 237896, 238017
-recovered CodingQuarry_transcript_19878-T1, internal, 238107, 238229
-recovered CodingQuarry_transcript_19878-T1, internal, 238288, 238475
-recovered CodingQuarry_transcript_19878-T1, internal, 238592, 238736
-recovered CodingQuarry_transcript_19878-T1, internal, 238837, 238980
-recovered CodingQuarry_transcript_19878-T1, internal, 239110, 239295
-recovered CodingQuarry_transcript_19878-T1, internal, 239542, 239656
-recovered CodingQuarry_transcript_19878-T1, internal, 239741, 239868
-recovered CodingQuarry_transcript_19878-T1, internal, 239953, 240047
-recovered CodingQuarry_transcript_19878-T1, internal, 240125, 240274
Valid prediction for CodingQuarry_transcript_19881-T1
Valid prediction for Augustus_model.g25107.t1
Valid prediction for Augustus_model.g25106.t1
Valid prediction for Augustus_model.g25124.t1
Valid prediction for snap_scaffold_16-snap.88-T1
Valid prediction for snap_scaffold_16-snap.53-T1
Valid prediction for snap_scaffold_16-snap.41-T1
Valid prediction for HiQ_model.g25099.t1
Valid prediction for GlimmerHMM_glimmerT_37698-T1
Valid prediction for GlimmerHMM_glimmerT_37702-T1
Valid prediction for pasa_asmbl_16854.p1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 40685, rend_intergenic: 38339  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 47586, rend_intergenic: 40958  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 63008, rend_intergenic: 62733  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 112942, rend_intergenic: 107687  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 118420, rend_intergenic: 115181  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 137758, rend_intergenic: 134886  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 189408, rend_intergenic: 186811  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 200403, rend_intergenic: 194945  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 208606, rend_intergenic: 208299  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 210810, rend_intergenic: 208704  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 241894, rend_intergenic: 241478  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 254648, rend_intergenic: 253619  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 268848, rend_intergenic: 262756  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 272937, rend_intergenic: 270343  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 307914, rend_intergenic: 303218  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 336417
-exon list size: 683


building trellis

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44.1    
44.2    
44.4    
44.5    
44.7    
44.8    
45.0    
45.1    
45.3    
45.4    
45.5    
45.7    
45.8    
46.0    
46.1    
46.3    
46.4    
46.6    
46.7    
46.9    
47.0    
47.2    
47.3    
47.4    
47.6    
47.7    
47.9    
48.0    
48.2    
48.3    
48.5    
48.6    
48.8    
48.9    
49.1    
49.2    
49.3    
49.5    
49.6    
49.8    
49.9    
50.1    
50.2    
50.4    
50.5    
50.7    
50.8    
50.9    
51.1    
51.2    
51.4    
51.5    
51.7    
51.8    
52.0    
52.1    
52.3    
52.4    
52.6    
52.7    
52.8    
53.0    
53.1    
53.3    
53.4    
53.6    
53.7    
53.9    
54.0    
54.2    
54.3    
54.5    
54.6    
54.7    
54.9    
55.0    
55.2    
55.3    
55.5    
55.6    
55.8    
55.9    
56.1    
56.2    
56.4    
56.5    
56.6    
56.8    
56.9    
57.1    
57.2    
57.4    
57.5    
57.7    
57.8    
58.0    
58.1    
58.2    
58.4    
58.5    
58.7    
58.8    
59.0    
59.1    
59.3    
59.4    
59.6    
59.7    
59.9    
60.0    
60.1    
60.3    
60.4    
60.6    
60.7    
60.9    
61.0    
61.2    
61.3    
61.5    
61.6    
61.8    
61.9    
62.0    
62.2    
62.3    
62.5    
62.6    
62.8    
62.9    
63.1    
63.2    
63.4    
63.5    
63.6    
63.8    
63.9    
64.1    
64.2    
64.4    
64.5    
64.7    
64.8    
65.0    
65.1    
65.3    
65.4    
65.5    
65.7    
65.8    
66.0    
66.1    
66.3    
66.4    
66.6    
66.7    
66.9    
67.0    
67.2    
67.3    
67.4    
67.6    
67.7    
67.9    
68.0    
68.2    
68.3    
68.5    
68.6    
68.8    
68.9    
69.1    
69.2    
69.3    
69.5    
69.6    
69.8    
69.9    
70.1    
70.2    
70.4    
70.5    
70.7    
70.8    
70.9    
71.1    
71.2    
71.4    
71.5    
71.7    
71.8    
72.0    
72.1    
72.3    
72.4    
72.6    
72.7    
72.8    
73.0    
73.1    
73.3    
73.4    
73.6    
73.7    
73.9    
74.0    
74.2    
74.3    
74.5    
74.6    
74.7    
74.9    
75.0    
75.2    
75.3    
75.5    
75.6    
75.8    
75.9    
76.1    
76.2    
76.4    
76.5    
76.6    
76.8    
76.9    
77.1    
77.2    
77.4    
77.5    
77.7    
77.8    
78.0    
78.1    
78.2    
78.4    
78.5    
78.7    
78.8    
79.0    
79.1    
79.3    
79.4    
79.6    
79.7    
79.9    
80.0    
80.1    
80.3    
80.4    
80.6    
80.7    
80.9    
81.0    
81.2    
81.3    
81.5    
81.6    
81.8    
81.9    
82.0    
82.2    
82.3    
82.5    
82.6    
82.8    
82.9    
83.1    
83.2    
83.4    
83.5    
83.6    
83.8    
83.9    
84.1    
84.2    
84.4    
84.5    
84.7    
84.8    
85.0    
85.1    
85.3    
85.4    
85.5    
85.7    
85.8    
86.0    
86.1    
86.3    
86.4    
86.6    
86.7    
86.9    
87.0    
87.2    
87.3    
87.4    
87.6    
87.7    
87.9    
88.0    
88.2    
88.3    
88.5    
88.6    
88.8    
88.9    
89.1    
89.2    
89.3    
89.5    
89.6    
89.8    
89.9    
90.1    
90.2    
90.4    
90.5    
90.7    
90.8    
90.9    
91.1    
91.2    
91.4    
91.5    
91.7    
91.8    
92.0    
92.1    
92.3    
92.4    
92.6    
92.7    
92.8    
93.0    
93.1    
93.3    
93.4    
93.6    
93.7    
93.9    
94.0    
94.2    
94.3    
94.5    
94.6    
94.7    
94.9    
95.0    
95.2    
95.3    
95.5    
95.6    
95.8    
95.9    
96.1    
96.2    
96.4    
96.5    
96.6    
96.8    
96.9    
97.1    
97.2    
97.4    
97.5    
97.7    
97.8    
98.0    
98.1    
98.2    
98.4    
98.5    
98.7    
98.8    
99.0    
99.1    
99.3    
99.4    
99.6    
99.7    
99.9    
-found 42 predictions from path traversal
Error with prediction: snap lend_intergenic: 40685, rend_intergenic: 38339  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 47586, rend_intergenic: 40958  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 63008, rend_intergenic: 62733  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 112942, rend_intergenic: 107687  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 118420, rend_intergenic: 115181  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 137758, rend_intergenic: 134886  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 189408, rend_intergenic: 186811  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 200403, rend_intergenic: 194945  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 208606, rend_intergenic: 208299  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 210810, rend_intergenic: 208704  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 241894, rend_intergenic: 241478  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 254648, rend_intergenic: 253619  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 268848, rend_intergenic: 262756  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 272937, rend_intergenic: 270343  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 307914, rend_intergenic: 303218  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 41 predictions persist after filtering for low support