-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_16/scaffold_16_11833812-12051288

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_16-snap.2247-T1
Valid prediction for snap_scaffold_16-snap.2284-T1
Couldn't classify 212905, 213218
Sorry, prediction pasa_asmbl_16630.p1 fails validation.
(TCC)	 GG	212905-213218	GT	ACG
(GTT)	 AG	213359-213429	GT	GTG
(GTT)	 AG	213558-213701	GT	GGG
(ACG)	 AG	214440-214600	GT	CGG
(GTT)	 AG	214754-214844	GT	TGG
(GAC)	 AG	215148-215230	AG	GAA
-recovered pasa_asmbl_16630.p1, terminal, 215148, 215230
-recovered pasa_asmbl_16630.p1, internal, 213359, 213429
-recovered pasa_asmbl_16630.p1, internal, 213558, 213701
-recovered pasa_asmbl_16630.p1, internal, 214440, 214600
-recovered pasa_asmbl_16630.p1, internal, 214754, 214844
Valid prediction for GlimmerHMM_glimmerT_39126-T1
Valid prediction for GlimmerHMM_glimmerT_39146-T1
Valid prediction for Augustus_model.g26143.t1
Valid prediction for GlimmerHMM_glimmerT_39131-T1
Valid prediction for GlimmerHMM_glimmerT_39147-T1
Couldn't classify 102794, 102982
Sorry, prediction pasa_asmbl_16614.p1 fails validation.
(CTG)	 GA	102794-102982	GT	GCG
(GTT)	 AG	103277-103414	GT	CAG
(GAC)	 AG	103706-103857	GT	CCG
(GTG)	 AG	104204-104366	GT	AGG
(CTG)	 AG	104508-104616	GT	AGG
(GTA)	 AG	105040-105162	GT	CGG
(ACA)	 AG	105326-105440	GT	GCG
(TGT)	 AG	105633-105696	GT	AGG
(GTC)	 AG	106071-106274	GT	AGG
(GCT)	 AG	106400-106494	GT	AGG
(GTT)	 AG	106618-106789	GT	AGG
(GAC)	 AG	107248-107340	GC	GAG
-recovered pasa_asmbl_16614.p1, terminal, 107248, 107340
-recovered pasa_asmbl_16614.p1, internal, 103277, 103414
-recovered pasa_asmbl_16614.p1, internal, 103706, 103857
-recovered pasa_asmbl_16614.p1, internal, 104204, 104366
-recovered pasa_asmbl_16614.p1, internal, 104508, 104616
-recovered pasa_asmbl_16614.p1, internal, 105040, 105162
-recovered pasa_asmbl_16614.p1, internal, 105326, 105440
-recovered pasa_asmbl_16614.p1, internal, 105633, 105696
-recovered pasa_asmbl_16614.p1, internal, 106071, 106274
-recovered pasa_asmbl_16614.p1, internal, 106400, 106494
-recovered pasa_asmbl_16614.p1, internal, 106618, 106789
-recovered pasa_asmbl_16614.p1, internal, 107248, 107340
Valid prediction for snap_scaffold_16-snap.2272-T1
Valid prediction for snap_scaffold_16-snap.2258-T1
Valid prediction for snap_scaffold_16-snap.2244-T1
Valid prediction for Augustus_model.g26147.t1
Valid prediction for snap_scaffold_16-snap.2274-T1
Valid prediction for snap_scaffold_16-snap.2278-T1
Valid prediction for snap_scaffold_16-snap.2243-T1
Valid prediction for Augustus_model.g26137.t1
Valid prediction for GlimmerHMM_glimmerT_39154-T1
Valid prediction for snap_scaffold_16-snap.2270-T1
Couldn't classify 184793, 184957
Sorry, prediction pasa_asmbl_16625.p1 fails validation.
(CAC)	 GA	184793-184957	GT	AGG
(ATG)	 AG	185132-185233	GT	AGG
(GTC)	 AG	185338-185466	TT	AAT
-recovered pasa_asmbl_16625.p1, initial, 185132, 185233
-recovered pasa_asmbl_16625.p1, terminal, 185338, 185466
-recovered pasa_asmbl_16625.p1, internal, 185132, 185233
Valid prediction for GlimmerHMM_glimmerT_39142-T1
Valid prediction for HiQ_model.g26141.t1
Valid prediction for CodingQuarry_transcript_20103-T1
Valid prediction for Augustus_model.g26146.t1
Valid prediction for snap_scaffold_16-snap.2256-T1
Valid prediction for GlimmerHMM_glimmerT_39132-T1
Valid prediction for Augustus_model.g26134.t1
Couldn't classify 121263, 121429
Sorry, prediction pasa_asmbl_16621.p1 fails validation.
(ATA)	 GG	121263-121429	GT	AGG
(TTC)	 AG	122452-122728	AG	AGA
-recovered pasa_asmbl_16621.p1, terminal, 122452, 122728
Valid prediction for Augustus_model.g26135.t1
Valid prediction for snap_scaffold_16-snap.2237-T1
Valid prediction for GlimmerHMM_glimmerT_39141-T1
Valid prediction for GlimmerHMM_glimmerT_39128-T1
Valid prediction for snap_scaffold_16-snap.2255-T1
Valid prediction for snap_scaffold_16-snap.2263-T1
Valid prediction for snap_scaffold_16-snap.2261-T1
Valid prediction for snap_scaffold_16-snap.2264-T1
Valid prediction for HiQ_model.g26152.t1
Valid prediction for Augustus_model.g26138.t1
Valid prediction for GlimmerHMM_glimmerT_39129-T1
Valid prediction for CodingQuarry_transcript_20108-T1
Valid prediction for HiQ_model.g26154.t1
Valid prediction for GlimmerHMM_glimmerT_39156-T1
Valid prediction for GlimmerHMM_glimmerT_39159-T1
Valid prediction for snap_scaffold_16-snap.2248-T1
Valid prediction for GlimmerHMM_glimmerT_39140-T1
Valid prediction for GlimmerHMM_glimmerT_39133-T1
Valid prediction for snap_scaffold_16-snap.2249-T1
Couldn't classify 82498, 82580
Couldn't classify 83329, 83475
Sorry, prediction pasa_asmbl_16610.p1 fails validation.
(GGG)	 AT	82498-82580	GT	AGG
(TGG)	 AG	82757-82950	GT	AGG
(ATG)	 AG	83068-83129	GT	CGG
(TAC)	 AG	83329-83475	TA	CCT
add_exon() Sorry, pasa_asmbl_16610.p1 83068-83129-initial-1 is invalid.
-recovered pasa_asmbl_16610.p1, initial, 83068, 83129
-recovered pasa_asmbl_16610.p1, internal, 82757, 82950
-recovered pasa_asmbl_16610.p1, internal, 83068, 83129
Valid prediction for GlimmerHMM_glimmerT_39139-T1
Valid prediction for Augustus_model.g26132.t1
Valid prediction for snap_scaffold_16-snap.2281-T1
Couldn't classify 136198, 136343
Couldn't classify 138320, 138473
Sorry, prediction pasa_asmbl_16784.p1 fails validation.
(GAG)	 AC	136198-136343	GT	AGG
(GCT)	 AG	138320-138473	AC	GTA
Valid prediction for snap_scaffold_16-snap.2262-T1
Valid prediction for GlimmerHMM_glimmerT_39149-T1
Valid prediction for Augustus_model.g26142.t1
Valid prediction for snap_scaffold_16-snap.2257-T1
Valid prediction for snap_scaffold_16-snap.2240-T1
Couldn't classify 120228, 120873
Sorry, prediction pasa_asmbl_16618.p1 fails validation.
(ATG)	 CC	119649-119794	GT	AGG
(ATG)	 AG	120228-120873	TG	ACT
-recovered pasa_asmbl_16618.p1, initial, 119649, 119794
Valid prediction for CodingQuarry_transcript_20110-T1
Valid prediction for snap_scaffold_16-snap.2273-T1
Valid prediction for Augustus_model.g26156.t1
Valid prediction for GlimmerHMM_glimmerT_39135-T1
Valid prediction for GlimmerHMM_glimmerT_39136-T1
Valid prediction for Augustus_model.g26136.t1
Valid prediction for snap_scaffold_16-snap.2266-T1
Valid prediction for snap_scaffold_16-snap.2282-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for CodingQuarry_transcript_20107-T1
Valid prediction for GlimmerHMM_glimmerT_39134-T1
Valid prediction for snap_scaffold_16-snap.2241-T1
Couldn't classify 16283, 16420
Couldn't classify 17578, 17634
Sorry, prediction pasa_asmbl_17387.p1 fails validation.
(CAG)	 TT	16283-16420	GT	AGG
(CTG)	 AG	16655-16768	GT	CTG
(GGA)	 AG	16978-17077	GT	AGG
(AGC)	 AG	17315-17409	GT	AGG
(TTT)	 AG	17578-17634	GT	GCG
-recovered pasa_asmbl_17387.p1, internal, 16655, 16768
-recovered pasa_asmbl_17387.p1, internal, 16978, 17077
-recovered pasa_asmbl_17387.p1, internal, 17315, 17409
-recovered pasa_asmbl_17387.p1, internal, 17578, 17634
Valid prediction for GlimmerHMM_glimmerT_39158-T1
Valid prediction for GlimmerHMM_glimmerT_39148-T1
Valid prediction for Augustus_model.g26148.t1
Valid prediction for snap_scaffold_16-snap.2252-T1
Valid prediction for snap_scaffold_16-snap.2250-T1
Valid prediction for snap_scaffold_16-snap.2239-T1
Valid prediction for snap_scaffold_16-snap.2254-T1
Valid prediction for Augustus_model.g26131.t1
Valid prediction for snap_scaffold_16-snap.2275-T1
Valid prediction for snap_scaffold_16-snap.2267-T1
Valid prediction for snap_scaffold_16-snap.2246-T1
Valid prediction for snap_scaffold_16-snap.2271-T1
Valid prediction for GlimmerHMM_glimmerT_39153-T1
Valid prediction for GlimmerHMM_glimmerT_39152-T1
Valid prediction for CodingQuarry_transcript_20109-T1
Valid prediction for pasa_asmbl_17375.p1
Couldn't classify 18702, 18799
Couldn't classify 20425, 20585
Sorry, prediction pasa_asmbl_17386.p1 fails validation.
(GCG)	 AT	18702-18799	GT	CTG
(ACA)	 AG	19073-19151	GT	AGG
(GTG)	 AG	19306-19431	GT	AGG
(ATG)	 AG	19687-19814	GT	AGG
(GCA)	 AG	20145-20320	GT	CGG
(GTC)	 AG	20425-20585	GC	AGG
-recovered pasa_asmbl_17386.p1, initial, 19687, 19814
-recovered pasa_asmbl_17386.p1, internal, 19073, 19151
-recovered pasa_asmbl_17386.p1, internal, 19306, 19431
-recovered pasa_asmbl_17386.p1, internal, 19687, 19814
-recovered pasa_asmbl_17386.p1, internal, 20145, 20320
-recovered pasa_asmbl_17386.p1, internal, 20425, 20585
Valid prediction for snap_scaffold_16-snap.2276-T1
Valid prediction for snap_scaffold_16-snap.2236-T1
Valid prediction for Augustus_model.g26150.t1
Valid prediction for snap_scaffold_16-snap.2245-T1
Valid prediction for snap_scaffold_16-snap.2279-T1
Valid prediction for HiQ_model.g26153.t1
Valid prediction for snap_scaffold_16-snap.2260-T1
Valid prediction for GlimmerHMM_glimmerT_39143-T1
Couldn't classify 47468, 47489
Couldn't classify 51972, 52088
Sorry, prediction pasa_asmbl_17379.p1 fails validation.
(TTC)	 GC	47468-47489	GT	ACG
(ATG)	 AG	48522-48715	GT	TGG
(GAC)	 AG	50407-50472	GT	TGG
(GAG)	 AG	51972-52088	AA	AGA
add_exon() Sorry, pasa_asmbl_17379.p1 48522-48715-initial-1 is invalid.
-recovered pasa_asmbl_17379.p1, initial, 48522, 48715
-recovered pasa_asmbl_17379.p1, internal, 48522, 48715
-recovered pasa_asmbl_17379.p1, internal, 50407, 50472
Valid prediction for GlimmerHMM_glimmerT_39145-T1
Valid prediction for Augustus_model.g26155.t1
Valid prediction for CodingQuarry_transcript_20102-T1
Valid prediction for Augustus_model.g26144.t1
Valid prediction for snap_scaffold_16-snap.2253-T1
Valid prediction for snap_scaffold_16-snap.2268-T1
Valid prediction for CodingQuarry_transcript_20105-T1
Valid prediction for GlimmerHMM_glimmerT_39155-T1
Valid prediction for GlimmerHMM_glimmerT_39150-T1
Couldn't classify 33132, 33300
Sorry, prediction pasa_asmbl_17380.p1 fails validation.
(TAC)	 CC	33132-33300	GT	CGG
(ACT)	 AG	33682-33804	GT	ATG
(TGG)	 AG	33942-34104	GT	AGG
(AGC)	 AG	34203-34263	TG	AAT
-recovered pasa_asmbl_17380.p1, terminal, 34203, 34263
-recovered pasa_asmbl_17380.p1, internal, 33682, 33804
-recovered pasa_asmbl_17380.p1, internal, 33942, 34104
Valid prediction for CodingQuarry_transcript_20104-T1
Valid prediction for snap_scaffold_16-snap.2259-T1
Couldn't classify 28368, 28436
Sorry, prediction pasa_asmbl_17382.p1 fails validation.
(AGG)	 GC	28368-28436	GT	AGG
(GAG)	 AG	29095-29220	GT	CTG
(ATG)	 AG	29391-29537	GT	AGG
(TTA)	 AG	30267-30326	GT	AGG
(GTG)	 AG	31000-31050	GT	GAG
-recovered pasa_asmbl_17382.p1, initial, 29391, 29537
-recovered pasa_asmbl_17382.p1, terminal, 31000, 31050
-recovered pasa_asmbl_17382.p1, internal, 29095, 29220
-recovered pasa_asmbl_17382.p1, internal, 29391, 29537
-recovered pasa_asmbl_17382.p1, internal, 30267, 30326
-recovered pasa_asmbl_17382.p1, internal, 31000, 31050
Couldn't classify 52185, 52350
Sorry, prediction pasa_asmbl_17378.p1 fails validation.
(GAA)	 AG	52185-52350	GT	TGG
(GGG)	 AG	54322-54518	GC	GAG
-recovered pasa_asmbl_17378.p1, terminal, 54322, 54518
-recovered pasa_asmbl_17378.p1, internal, 52185, 52350
-recovered pasa_asmbl_17378.p1, internal, 54322, 54518
Valid prediction for GlimmerHMM_glimmerT_39138-T1
Valid prediction for snap_scaffold_16-snap.2251-T1
Valid prediction for HiQ_model.g26151.t1
Valid prediction for GlimmerHMM_glimmerT_39157-T1
Sorry, intron length (3) is less than minimum required (10)
Valid prediction for Augustus_model.g26149.t1
Valid prediction for GlimmerHMM_glimmerT_39127-T1
Valid prediction for GlimmerHMM_glimmerT_39130-T1
Valid prediction for GlimmerHMM_glimmerT_39124-T1
Valid prediction for GlimmerHMM_glimmerT_39144-T1
Valid prediction for Augustus_model.g26139.t1
Valid prediction for GlimmerHMM_glimmerT_39151-T1
Valid prediction for snap_scaffold_16-snap.2280-T1
Valid prediction for snap_scaffold_16-snap.2242-T1
Sorry, intron length (3) is less than minimum required (10)
Valid prediction for Augustus_model.g26133.t1
Valid prediction for snap_scaffold_16-snap.2283-T1
Valid prediction for snap_scaffold_16-snap.2277-T1
Valid prediction for snap_scaffold_16-snap.2269-T1
Valid prediction for snap_scaffold_16-snap.2238-T1
Valid prediction for snap_scaffold_16-snap.2235-T1
Valid prediction for GlimmerHMM_glimmerT_39137-T1
Valid prediction for snap_scaffold_16-snap.2265-T1
Valid prediction for GlimmerHMM_glimmerT_39125-T1
Valid prediction for HiQ_model.g26140.t1
Valid prediction for Augustus_model.g26145.t1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 17985, rend_intergenic: 14856  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 40365, rend_intergenic: 23881  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 52094, rend_intergenic: 40691  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 56258, rend_intergenic: 53309  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 75609, rend_intergenic: 61128  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 84001, rend_intergenic: 76707  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 104608, rend_intergenic: 102023  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 122728, rend_intergenic: 120246  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 128054, rend_intergenic: 123572  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 142179, rend_intergenic: 139966  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 158933, rend_intergenic: 145918  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 164713, rend_intergenic: 163808  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 164982, rend_intergenic: 164809  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 171004, rend_intergenic: 165136  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 177481, rend_intergenic: 173193  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 194854, rend_intergenic: 190843  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 198752, rend_intergenic: 195795  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 217477
-exon list size: 602


building trellis

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51.5    
51.7    
51.8    
52.0    
52.2    
52.3    
52.5    
52.6    
52.8    
53.0    
53.1    
53.3    
53.5    
53.6    
53.8    
54.0    
54.1    
54.3    
54.5    
54.6    
54.8    
55.0    
55.1    
55.3    
55.5    
55.6    
55.8    
56.0    
56.1    
56.3    
56.5    
56.6    
56.8    
57.0    
57.1    
57.3    
57.5    
57.6    
57.8    
57.9    
58.1    
58.3    
58.4    
58.6    
58.8    
58.9    
59.1    
59.3    
59.4    
59.6    
59.8    
59.9    
60.1    
60.3    
60.4    
60.6    
60.8    
60.9    
61.1    
61.3    
61.4    
61.6    
61.8    
61.9    
62.1    
62.3    
62.4    
62.6    
62.7    
62.9    
63.1    
63.2    
63.4    
63.6    
63.7    
63.9    
64.1    
64.2    
64.4    
64.6    
64.7    
64.9    
65.1    
65.2    
65.4    
65.6    
65.7    
65.9    
66.1    
66.2    
66.4    
66.6    
66.7    
66.9    
67.1    
67.2    
67.4    
67.5    
67.7    
67.9    
68.0    
68.2    
68.4    
68.5    
68.7    
68.9    
69.0    
69.2    
69.4    
69.5    
69.7    
69.9    
70.0    
70.2    
70.4    
70.5    
70.7    
70.9    
71.0    
71.2    
71.4    
71.5    
71.7    
71.9    
72.0    
72.2    
72.4    
72.5    
72.7    
72.8    
73.0    
73.2    
73.3    
73.5    
73.7    
73.8    
74.0    
74.2    
74.3    
74.5    
74.7    
74.8    
75.0    
75.2    
75.3    
75.5    
75.7    
75.8    
76.0    
76.2    
76.3    
76.5    
76.7    
76.8    
77.0    
77.2    
77.3    
77.5    
77.6    
77.8    
78.0    
78.1    
78.3    
78.5    
78.6    
78.8    
79.0    
79.1    
79.3    
79.5    
79.6    
79.8    
80.0    
80.1    
80.3    
80.5    
80.6    
80.8    
81.0    
81.1    
81.3    
81.5    
81.6    
81.8    
82.0    
82.1    
82.3    
82.5    
82.6    
82.8    
82.9    
83.1    
83.3    
83.4    
83.6    
83.8    
83.9    
84.1    
84.3    
84.4    
84.6    
84.8    
84.9    
85.1    
85.3    
85.4    
85.6    
85.8    
85.9    
86.1    
86.3    
86.4    
86.6    
86.8    
86.9    
87.1    
87.3    
87.4    
87.6    
87.7    
87.9    
88.1    
88.2    
88.4    
88.6    
88.7    
88.9    
89.1    
89.2    
89.4    
89.6    
89.7    
89.9    
90.1    
90.2    
90.4    
90.6    
90.7    
90.9    
91.1    
91.2    
91.4    
91.6    
91.7    
91.9    
92.1    
92.2    
92.4    
92.5    
92.7    
92.9    
93.0    
93.2    
93.4    
93.5    
93.7    
93.9    
94.0    
94.2    
94.4    
94.5    
94.7    
94.9    
95.0    
95.2    
95.4    
95.5    
95.7    
95.9    
96.0    
96.2    
96.4    
96.5    
96.7    
96.9    
97.0    
97.2    
97.4    
97.5    
97.7    
97.8    
98.0    
98.2    
98.3    
98.5    
98.7    
98.8    
99.0    
99.2    
99.3    
99.5    
99.7    
99.8    
-found 34 predictions from path traversal
Error with prediction: snap lend_intergenic: 17985, rend_intergenic: 14856  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 40365, rend_intergenic: 23881  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 52094, rend_intergenic: 40691  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 56258, rend_intergenic: 53309  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 75609, rend_intergenic: 61128  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 84001, rend_intergenic: 76707  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 104608, rend_intergenic: 102023  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 122728, rend_intergenic: 120246  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 128054, rend_intergenic: 123572  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 142179, rend_intergenic: 139966  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 158933, rend_intergenic: 145918  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 164713, rend_intergenic: 163808  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 164982, rend_intergenic: 164809  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 171004, rend_intergenic: 165136  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 177481, rend_intergenic: 173193  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 194854, rend_intergenic: 190843  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 198752, rend_intergenic: 195795  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 28 predictions persist after filtering for low support