-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_1524

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 1704, 1943
Sorry, prediction snap_scaffold_1524-snap.1-T1 fails validation.
(ATG)	 GC	400-419	GT	AGG
(AGC)	 AG	668-788	GT	GGG
(CAT)	 AG	1704-1943	GT	AGG
-recovered snap_scaffold_1524-snap.1-T1, initial, 400, 419
-recovered snap_scaffold_1524-snap.1-T1, internal, 668, 788
-recovered snap_scaffold_1524-snap.1-T1, internal, 1704, 1943

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_1524-snap.2-T1
Couldn't classify 1517, 1640
Sorry, prediction Augustus_model.g40537.t1 fails validation.
(ATG)	 AG	857-885	GT	AGG
(GGC)	 AG	1517-1640	GT	AGG
-recovered Augustus_model.g40537.t1, initial, 857, 885
-recovered Augustus_model.g40537.t1, internal, 857, 885
-recovered Augustus_model.g40537.t1, internal, 1517, 1640

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 1943, rend_intergenic: 614  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 2271
-exon list size: 12


building trellis

7.1    
14.3    
21.4    
28.6    
35.7    
42.9    
50.0    
57.1    
64.3    
71.4    
78.6    
85.7    
92.9    
-found 1 predictions from path traversal
Error with prediction: snap lend_intergenic: 1943, rend_intergenic: 614  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support