-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_1503

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)
-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_1503-snap.1-T1
Sorry, intron length (4) is less than minimum required (10)
Couldn't classify 959, 1102
Couldn't classify 1710, 2155
Sorry, prediction Augustus_model.g40523.t1 fails validation.
(GAC)	 AG	959-1102	GT	GTG
(GCG)	 AG	1710-2155	GT	AGG
-recovered Augustus_model.g40523.t1, internal, 959, 1102
-recovered Augustus_model.g40523.t1, internal, 1710, 2155
Valid prediction for GlimmerHMM_glimmerT_61178-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 2311
-exon list size: 8


building trellis

10.0    
20.0    
30.0    
40.0    
50.0    
60.0    
70.0    
80.0    
90.0    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 1 predictions persist after filtering for low support