-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_15/scaffold_15_4701950-4872694

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for Augustus_model.g24051.t1
Couldn't classify 130394, 130528
Couldn't classify 133520, 133545
Sorry, prediction pasa_asmbl_15866.p1 fails validation.
(GAA)	 CA	130394-130528	GT	AGG
(AGG)	 AG	131064-131159	GT	GAG
(GGT)	 AG	131337-131409	GT	CAG
(TTT)	 AG	133520-133545	CC	GTC
-recovered pasa_asmbl_15866.p1, internal, 131064, 131159
-recovered pasa_asmbl_15866.p1, internal, 131337, 131409
Valid prediction for Augustus_model.g24063.t1
Valid prediction for GlimmerHMM_glimmerT_36065-T1
Valid prediction for snap_scaffold_15-snap.1013-T1
Valid prediction for snap_scaffold_15-snap.1029-T1
Valid prediction for GlimmerHMM_glimmerT_36062-T1
Valid prediction for snap_scaffold_15-snap.1017-T1
Valid prediction for snap_scaffold_15-snap.1041-T1
Valid prediction for Augustus_model.g24059.t1
Valid prediction for GlimmerHMM_glimmerT_36069-T1
Valid prediction for snap_scaffold_15-snap.1018-T1
Valid prediction for GlimmerHMM_glimmerT_36072-T1
Valid prediction for GlimmerHMM_glimmerT_36078-T1
Valid prediction for Augustus_model.g24060.t1
Couldn't classify 108364, 108412
Sorry, prediction pasa_asmbl_15171.p1 fails validation.
(ATG)	 AG	105597-106085	GT	AGG
(CTG)	 AG	106180-106423	GT	AGG
(GAA)	 AG	106532-106792	GT	AGG
(ACA)	 AG	107038-107252	GT	AGG
(GCG)	 AG	107380-107486	GT	GGG
(GTC)	 AG	107688-107796	GT	AGG
(GCC)	 AG	108129-108226	GT	GGG
(GTA)	 AG	108364-108412	AA	GCA
-recovered pasa_asmbl_15171.p1, initial, 105597, 106085
-recovered pasa_asmbl_15171.p1, internal, 105597, 106085
-recovered pasa_asmbl_15171.p1, internal, 106180, 106423
-recovered pasa_asmbl_15171.p1, internal, 106532, 106792
-recovered pasa_asmbl_15171.p1, internal, 107038, 107252
-recovered pasa_asmbl_15171.p1, internal, 107380, 107486
-recovered pasa_asmbl_15171.p1, internal, 107688, 107796
-recovered pasa_asmbl_15171.p1, internal, 108129, 108226
Valid prediction for GlimmerHMM_glimmerT_36070-T1
Valid prediction for snap_scaffold_15-snap.1038-T1
Valid prediction for pasa_asmbl_15168.p1
Valid prediction for HiQ_model.g24057.t1
Valid prediction for snap_scaffold_15-snap.1050-T1
Valid prediction for HiQ_model.g24048.t1
Valid prediction for CodingQuarry_transcript_17990-T1
Valid prediction for snap_scaffold_15-snap.1021-T1
Valid prediction for snap_scaffold_15-snap.1008-T1
Valid prediction for snap_scaffold_15-snap.1020-T1
Valid prediction for Augustus_model.g24061.t1
Valid prediction for snap_scaffold_15-snap.1011-T1
Couldn't classify 109614, 109784
Sorry, prediction pasa_asmbl_15172.p1 fails validation.
(TCT)	 AG	109614-109784	GT	TGG
(AAA)	 AG	109980-110160	GT	AGG
(AGC)	 AG	110559-110672	GT	GGG
(GCC)	 AG	110802-111034	CA	AGC
-recovered pasa_asmbl_15172.p1, terminal, 110802, 111034
-recovered pasa_asmbl_15172.p1, internal, 109614, 109784
-recovered pasa_asmbl_15172.p1, internal, 109980, 110160
-recovered pasa_asmbl_15172.p1, internal, 110559, 110672
Valid prediction for snap_scaffold_15-snap.1032-T1
Valid prediction for Augustus_model.g24052.t1
Valid prediction for GlimmerHMM_glimmerT_36076-T1
Valid prediction for snap_scaffold_15-snap.1027-T1
Valid prediction for HiQ_model.g24047.t1
Valid prediction for snap_scaffold_15-snap.1036-T1
Valid prediction for snap_scaffold_15-snap.1025-T1
Valid prediction for snap_scaffold_15-snap.1030-T1
Valid prediction for GlimmerHMM_glimmerT_36066-T1
Valid prediction for snap_scaffold_15-snap.1040-T1
Valid prediction for CodingQuarry_transcript_17986-T1
Valid prediction for Augustus_model.g24055.t1
Valid prediction for snap_scaffold_15-snap.1047-T1
Valid prediction for GlimmerHMM_glimmerT_36083-T1
Valid prediction for pasa_asmbl_15165.p1
Valid prediction for CodingQuarry_transcript_17985-T1
Valid prediction for Augustus_model.g24046.t1
Valid prediction for GlimmerHMM_glimmerT_36063-T1
Valid prediction for snap_scaffold_15-snap.1033-T1
Valid prediction for GlimmerHMM_glimmerT_36087-T1
Valid prediction for GlimmerHMM_glimmerT_36081-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_15-snap.1049-T1
Valid prediction for Augustus_model.g24049.t1
Valid prediction for snap_scaffold_15-snap.1019-T1
Valid prediction for GlimmerHMM_glimmerT_36068-T1
Valid prediction for snap_scaffold_15-snap.1023-T1
Couldn't classify 55431, 55634
Sorry, prediction pasa_asmbl_14164.p1 fails validation.
(CCC)	 CA	55431-55634	GT	AGG
(GTG)	 AG	55787-55836	GT	CTG
(GTT)	 AG	55935-56014	GT	AGG
(ACC)	 AG	56166-56258	GT	AGG
(GTC)	 AG	56427-56524	GT	GGG
(GCC)	 AG	56767-56943	GT	AGG
(ATC)	 AG	57095-57209	GT	TGG
(TGG)	 AG	57453-57706	AA	AGA
-recovered pasa_asmbl_14164.p1, terminal, 57453, 57706
-recovered pasa_asmbl_14164.p1, internal, 55787, 55836
-recovered pasa_asmbl_14164.p1, internal, 55935, 56014
-recovered pasa_asmbl_14164.p1, internal, 56166, 56258
-recovered pasa_asmbl_14164.p1, internal, 56427, 56524
-recovered pasa_asmbl_14164.p1, internal, 56767, 56943
-recovered pasa_asmbl_14164.p1, internal, 57095, 57209
Valid prediction for GlimmerHMM_glimmerT_36084-T1
Valid prediction for Augustus_model.g24050.t1
Couldn't classify 97605, 97784
Couldn't classify 100893, 101117
Sorry, prediction pasa_asmbl_14156.p1 fails validation.
(GCA)	 AA	97605-97784	GT	AGG
(GAT)	 AG	100266-100406	GT	GGG
(GTG)	 AG	100893-101117	GG	CTG
-recovered pasa_asmbl_14156.p1, internal, 100266, 100406
Valid prediction for snap_scaffold_15-snap.1045-T1
Valid prediction for Augustus_model.g24053.t1
Valid prediction for GlimmerHMM_glimmerT_36079-T1
Couldn't classify 91914, 91923
Couldn't classify 94273, 94326
Sorry, prediction pasa_asmbl_14157.p1 fails validation.
(GAG)	 AG	91914-91923	GT	CGG
(ATA)	 AG	92093-92160	GT	GGG
(ACT)	 AG	92270-92473	GT	AGG
(GGC)	 AG	92606-92686	GT	AGG
(AGA)	 AG	93345-93440	GT	AGG
(GTG)	 AG	94273-94326	AG	GGA
-recovered pasa_asmbl_14157.p1, internal, 91914, 91923
-recovered pasa_asmbl_14157.p1, internal, 92093, 92160
-recovered pasa_asmbl_14157.p1, internal, 92270, 92473
-recovered pasa_asmbl_14157.p1, internal, 92606, 92686
-recovered pasa_asmbl_14157.p1, internal, 93345, 93440
Valid prediction for GlimmerHMM_glimmerT_36061-T1
Valid prediction for snap_scaffold_15-snap.1046-T1
Valid prediction for Augustus_model.g24064.t1
Valid prediction for GlimmerHMM_glimmerT_36077-T1
Valid prediction for snap_scaffold_15-snap.1024-T1
Valid prediction for GlimmerHMM_glimmerT_36086-T1
Valid prediction for snap_scaffold_15-snap.1044-T1
Valid prediction for snap_scaffold_15-snap.1031-T1
Valid prediction for Augustus_model.g24062.t1
Valid prediction for GlimmerHMM_glimmerT_36074-T1
Valid prediction for CodingQuarry_transcript_17987-T1
Valid prediction for snap_scaffold_15-snap.1043-T1
Valid prediction for CodingQuarry_transcript_17989-T1
Valid prediction for snap_scaffold_15-snap.1048-T1
Valid prediction for GlimmerHMM_glimmerT_36085-T1
Valid prediction for snap_scaffold_15-snap.1014-T1
Valid prediction for GlimmerHMM_glimmerT_36073-T1
Valid prediction for HiQ_model.g24058.t1
Valid prediction for snap_scaffold_15-snap.1042-T1
Valid prediction for GlimmerHMM_glimmerT_36080-T1
Valid prediction for snap_scaffold_15-snap.1051-T1
Valid prediction for CodingQuarry_transcript_17988-T1
Valid prediction for snap_scaffold_15-snap.1037-T1
Valid prediction for GlimmerHMM_glimmerT_36075-T1
Valid prediction for snap_scaffold_15-snap.1039-T1
Valid prediction for snap_scaffold_15-snap.1016-T1
Valid prediction for GlimmerHMM_glimmerT_36064-T1
Couldn't classify 115345, 115704
Sorry, prediction pasa_asmbl_14153.p1 fails validation.
(CCC)	 CC	115345-115704	CC	AAC
Valid prediction for snap_scaffold_15-snap.1015-T1
Valid prediction for HiQ_model.g24056.t1
Valid prediction for snap_scaffold_15-snap.1009-T1
Valid prediction for snap_scaffold_15-snap.1010-T1
Valid prediction for pasa_asmbl_14159.p1
Valid prediction for snap_scaffold_15-snap.1035-T1
Valid prediction for GlimmerHMM_glimmerT_36089-T1
Valid prediction for GlimmerHMM_glimmerT_36082-T1
Valid prediction for GlimmerHMM_glimmerT_36067-T1
Valid prediction for snap_scaffold_15-snap.1026-T1
Valid prediction for snap_scaffold_15-snap.1022-T1
Valid prediction for GlimmerHMM_glimmerT_36088-T1
Valid prediction for snap_scaffold_15-snap.1012-T1
Valid prediction for HiQ_model.g24054.t1
Couldn't classify 21803, 21818
Couldn't classify 25745, 25871
Sorry, prediction pasa_asmbl_14168.p1 fails validation.
(GAG)	 CC	21803-21818	GT	CGG
(CGA)	 AG	22298-22362	GT	CGG
(GAG)	 AG	22795-22871	GT	AAG
(GAT)	 AG	23574-23655	GT	TGG
(CCG)	 AG	23901-23975	GT	AGG
(TCG)	 AG	24252-24350	GT	AGG
(ATT)	 AG	24454-24515	GT	AGG
(TCT)	 AG	25407-25517	GT	AGG
(TAA)	 AG	25745-25871	TG	GGT
-recovered pasa_asmbl_14168.p1, terminal, 22795, 22871
add_exon() Sorry, pasa_asmbl_14168.p1 25407-25517-terminal-1 is invalid.
-recovered pasa_asmbl_14168.p1, terminal, 25407, 25517
-recovered pasa_asmbl_14168.p1, internal, 22298, 22362
-recovered pasa_asmbl_14168.p1, internal, 22795, 22871
-recovered pasa_asmbl_14168.p1, internal, 23574, 23655
-recovered pasa_asmbl_14168.p1, internal, 23901, 23975
-recovered pasa_asmbl_14168.p1, internal, 24252, 24350
-recovered pasa_asmbl_14168.p1, internal, 24454, 24515
-recovered pasa_asmbl_14168.p1, internal, 25407, 25517
Valid prediction for snap_scaffold_15-snap.1034-T1
Valid prediction for GlimmerHMM_glimmerT_36071-T1
Valid prediction for CodingQuarry_transcript_17991-T1
Couldn't classify 114848, 115002
Sorry, prediction pasa_asmbl_14154.p1 fails validation.
(ATG)	 AC	112130-112152	GT	CGG
(GAC)	 AG	112669-112741	GT	CTG
(GTG)	 AG	113148-113306	GT	AGG
(ATC)	 AG	113472-113574	GT	ACG
(TGC)	 AG	113699-113787	GT	AGG
(AGG)	 AG	113927-114085	GT	AGG
(ATC)	 AG	114510-114681	GT	CGG
(GTG)	 AG	114848-115002	GC	TGG
-recovered pasa_asmbl_14154.p1, initial, 112130, 112152
-recovered pasa_asmbl_14154.p1, internal, 112669, 112741
-recovered pasa_asmbl_14154.p1, internal, 113148, 113306
-recovered pasa_asmbl_14154.p1, internal, 113472, 113574
-recovered pasa_asmbl_14154.p1, internal, 113699, 113787
-recovered pasa_asmbl_14154.p1, internal, 113927, 114085
-recovered pasa_asmbl_14154.p1, internal, 114510, 114681
-recovered pasa_asmbl_14154.p1, internal, 114848, 115002
Couldn't classify 89204, 89262
Couldn't classify 91728, 91787
Sorry, prediction pasa_asmbl_14158.p1 fails validation.
(CTA)	 CC	89204-89262	GT	AGG
(CGA)	 AG	89610-89767	GT	AGG
(AAC)	 AG	89925-89992	GT	AGG
(AGT)	 AG	90279-90425	GT	AGG
(CTT)	 AG	90557-90677	GT	GGG
(CCA)	 AG	90791-90984	GT	AGG
(ACC)	 AG	91189-91242	GT	AGG
(CTT)	 AG	91370-91573	GT	AGG
(GCG)	 AG	91728-91787	TT	ACT
-recovered pasa_asmbl_14158.p1, internal, 89610, 89767
-recovered pasa_asmbl_14158.p1, internal, 89925, 89992
-recovered pasa_asmbl_14158.p1, internal, 90279, 90425
-recovered pasa_asmbl_14158.p1, internal, 90557, 90677
-recovered pasa_asmbl_14158.p1, internal, 90791, 90984
-recovered pasa_asmbl_14158.p1, internal, 91189, 91242
-recovered pasa_asmbl_14158.p1, internal, 91370, 91573
Valid prediction for snap_scaffold_15-snap.1028-T1
Valid prediction for pasa_asmbl_14161.p1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 16787, rend_intergenic: 10881  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 23028, rend_intergenic: 18548  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 64562, rend_intergenic: 55313  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 68225, rend_intergenic: 66944  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 69751, rend_intergenic: 68326  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 70624, rend_intergenic: 69837  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 72593, rend_intergenic: 71687  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 81632, rend_intergenic: 72689  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 94318, rend_intergenic: 92758  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 111854, rend_intergenic: 106986  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 135370, rend_intergenic: 122242  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 144481, rend_intergenic: 141350  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 158333, rend_intergenic: 156611  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 160785, rend_intergenic: 159317  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 166262, rend_intergenic: 162426  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 168445, rend_intergenic: 166825  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 170745
-exon list size: 435


building trellis

0.2    
0.5    
0.7    
0.9    
1.1    
1.4    
1.6    
1.8    
2.1    
2.3    
2.5    
2.7    
3.0    
3.2    
3.4    
3.7    
3.9    
4.1    
4.3    
4.6    
4.8    
5.0    
5.3    
5.5    
5.7    
5.9    
6.2    
6.4    
6.6    
6.9    
7.1    
7.3    
7.6    
7.8    
8.0    
8.2    
8.5    
8.7    
8.9    
9.2    
9.4    
9.6    
9.8    
10.1    
10.3    
10.5    
10.8    
11.0    
11.2    
11.4    
11.7    
11.9    
12.1    
12.4    
12.6    
12.8    
13.0    
13.3    
13.5    
13.7    
14.0    
14.2    
14.4    
14.6    
14.9    
15.1    
15.3    
15.6    
15.8    
16.0    
16.2    
16.5    
16.7    
16.9    
17.2    
17.4    
17.6    
17.8    
18.1    
18.3    
18.5    
18.8    
19.0    
19.2    
19.5    
19.7    
19.9    
20.1    
20.4    
20.6    
20.8    
21.1    
21.3    
21.5    
21.7    
22.0    
22.2    
22.4    
22.7    
22.9    
23.1    
23.3    
23.6    
23.8    
24.0    
24.3    
24.5    
24.7    
24.9    
25.2    
25.4    
25.6    
25.9    
26.1    
26.3    
26.5    
26.8    
27.0    
27.2    
27.5    
27.7    
27.9    
28.1    
28.4    
28.6    
28.8    
29.1    
29.3    
29.5    
29.7    
30.0    
30.2    
30.4    
30.7    
30.9    
31.1    
31.4    
31.6    
31.8    
32.0    
32.3    
32.5    
32.7    
33.0    
33.2    
33.4    
33.6    
33.9    
34.1    
34.3    
34.6    
34.8    
35.0    
35.2    
35.5    
35.7    
35.9    
36.2    
36.4    
36.6    
36.8    
37.1    
37.3    
37.5    
37.8    
38.0    
38.2    
38.4    
38.7    
38.9    
39.1    
39.4    
39.6    
39.8    
40.0    
40.3    
40.5    
40.7    
41.0    
41.2    
41.4    
41.6    
41.9    
42.1    
42.3    
42.6    
42.8    
43.0    
43.2    
43.5    
43.7    
43.9    
44.2    
44.4    
44.6    
44.9    
45.1    
45.3    
45.5    
45.8    
46.0    
46.2    
46.5    
46.7    
46.9    
47.1    
47.4    
47.6    
47.8    
48.1    
48.3    
48.5    
48.7    
49.0    
49.2    
49.4    
49.7    
49.9    
50.1    
50.3    
50.6    
50.8    
51.0    
51.3    
51.5    
51.7    
51.9    
52.2    
52.4    
52.6    
52.9    
53.1    
53.3    
53.5    
53.8    
54.0    
54.2    
54.5    
54.7    
54.9    
55.1    
55.4    
55.6    
55.8    
56.1    
56.3    
56.5    
56.8    
57.0    
57.2    
57.4    
57.7    
57.9    
58.1    
58.4    
58.6    
58.8    
59.0    
59.3    
59.5    
59.7    
60.0    
60.2    
60.4    
60.6    
60.9    
61.1    
61.3    
61.6    
61.8    
62.0    
62.2    
62.5    
62.7    
62.9    
63.2    
63.4    
63.6    
63.8    
64.1    
64.3    
64.5    
64.8    
65.0    
65.2    
65.4    
65.7    
65.9    
66.1    
66.4    
66.6    
66.8    
67.0    
67.3    
67.5    
67.7    
68.0    
68.2    
68.4    
68.6    
68.9    
69.1    
69.3    
69.6    
69.8    
70.0    
70.3    
70.5    
70.7    
70.9    
71.2    
71.4    
71.6    
71.9    
72.1    
72.3    
72.5    
72.8    
73.0    
73.2    
73.5    
73.7    
73.9    
74.1    
74.4    
74.6    
74.8    
75.1    
75.3    
75.5    
75.7    
76.0    
76.2    
76.4    
76.7    
76.9    
77.1    
77.3    
77.6    
77.8    
78.0    
78.3    
78.5    
78.7    
78.9    
79.2    
79.4    
79.6    
79.9    
80.1    
80.3    
80.5    
80.8    
81.0    
81.2    
81.5    
81.7    
81.9    
82.2    
82.4    
82.6    
82.8    
83.1    
83.3    
83.5    
83.8    
84.0    
84.2    
84.4    
84.7    
84.9    
85.1    
85.4    
85.6    
85.8    
86.0    
86.3    
86.5    
86.7    
87.0    
87.2    
87.4    
87.6    
87.9    
88.1    
88.3    
88.6    
88.8    
89.0    
89.2    
89.5    
89.7    
89.9    
90.2    
90.4    
90.6    
90.8    
91.1    
91.3    
91.5    
91.8    
92.0    
92.2    
92.4    
92.7    
92.9    
93.1    
93.4    
93.6    
93.8    
94.1    
94.3    
94.5    
94.7    
95.0    
95.2    
95.4    
95.7    
95.9    
96.1    
96.3    
96.6    
96.8    
97.0    
97.3    
97.5    
97.7    
97.9    
98.2    
98.4    
98.6    
98.9    
99.1    
99.3    
99.5    
99.8    
-found 27 predictions from path traversal
Error with prediction: snap lend_intergenic: 16787, rend_intergenic: 10881  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 23028, rend_intergenic: 18548  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 64562, rend_intergenic: 55313  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 68225, rend_intergenic: 66944  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 69751, rend_intergenic: 68326  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 70624, rend_intergenic: 69837  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 72593, rend_intergenic: 71687  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 81632, rend_intergenic: 72689  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 94318, rend_intergenic: 92758  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 111854, rend_intergenic: 106986  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 135370, rend_intergenic: 122242  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 144481, rend_intergenic: 141350  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 158333, rend_intergenic: 156611  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 160785, rend_intergenic: 159317  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 166262, rend_intergenic: 162426  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 168445, rend_intergenic: 166825  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 20 predictions persist after filtering for low support