-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_15/scaffold_15_3749426-3975904

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_15-snap.828-T1
Valid prediction for Augustus_model.g23964.t1
Valid prediction for Augustus_model.g23960.t1
Valid prediction for snap_scaffold_15-snap.819-T1
Valid prediction for snap_scaffold_15-snap.815-T1
Valid prediction for snap_scaffold_15-snap.844-T1
Valid prediction for GlimmerHMM_glimmerT_35921-T1
Valid prediction for snap_scaffold_15-snap.812-T1
Valid prediction for snap_scaffold_15-snap.817-T1
Valid prediction for Augustus_model.g23956.t1
Valid prediction for snap_scaffold_15-snap.835-T1
Valid prediction for snap_scaffold_15-snap.829-T1
Valid prediction for GlimmerHMM_glimmerT_35927-T1
Valid prediction for snap_scaffold_15-snap.800-T1
Valid prediction for Augustus_model.g23958.t1
Valid prediction for snap_scaffold_15-snap.845-T1
Valid prediction for snap_scaffold_15-snap.839-T1
Couldn't classify 94308, 94482
Couldn't classify 96351, 96390
Sorry, prediction pasa_asmbl_15107.p1 fails validation.
(CTG)	 AG	94308-94482	GT	AGG
(GCT)	 AG	95450-95536	GT	AGG
(GAG)	 AG	95659-95729	GT	ATG
(GGG)	 AG	95843-95939	GT	ACG
(AGA)	 AG	96103-96187	GT	GAG
(ATA)	 AG	96351-96390	AC	GTA
-recovered pasa_asmbl_15107.p1, terminal, 95450, 95536
-recovered pasa_asmbl_15107.p1, internal, 94308, 94482
-recovered pasa_asmbl_15107.p1, internal, 95450, 95536
-recovered pasa_asmbl_15107.p1, internal, 95659, 95729
-recovered pasa_asmbl_15107.p1, internal, 95843, 95939
-recovered pasa_asmbl_15107.p1, internal, 96103, 96187
Valid prediction for snap_scaffold_15-snap.843-T1
Couldn't classify 159611, 159679
Couldn't classify 163295, 163383
Sorry, prediction pasa_asmbl_15113.p1 fails validation.
(GAC)	 CA	159611-159679	GT	AGG
(GTT)	 AG	159857-160021	GT	AAG
(GTG)	 AG	162515-162719	GT	AGG
(CTA)	 AG	163295-163383	GT	CGG
-recovered pasa_asmbl_15113.p1, internal, 159857, 160021
-recovered pasa_asmbl_15113.p1, internal, 162515, 162719
-recovered pasa_asmbl_15113.p1, internal, 163295, 163383
Valid prediction for snap_scaffold_15-snap.836-T1
Couldn't classify 165537, 165592
Sorry, prediction pasa_asmbl_15115.p1 fails validation.
(GAC)	 AC	165537-165592	GT	GGG
(GGA)	 AG	165785-165860	GT	AGG
(GTG)	 AG	165957-166132	GT	CGG
(ACA)	 AG	166857-166958	GT	AGG
(GAG)	 AG	167077-167134	GT	GGG
(CTG)	 AG	167254-167340	GT	AGG
(CTT)	 AG	167957-167987	GT	AGG
(GCC)	 AG	169588-169664	GG	GAG
-recovered pasa_asmbl_15115.p1, terminal, 169588, 169664
-recovered pasa_asmbl_15115.p1, internal, 165785, 165860
-recovered pasa_asmbl_15115.p1, internal, 165957, 166132
-recovered pasa_asmbl_15115.p1, internal, 166857, 166958
-recovered pasa_asmbl_15115.p1, internal, 167077, 167134
-recovered pasa_asmbl_15115.p1, internal, 167254, 167340
-recovered pasa_asmbl_15115.p1, internal, 167957, 167987
Valid prediction for GlimmerHMM_glimmerT_35931-T1
Valid prediction for GlimmerHMM_glimmerT_35942-T1
Valid prediction for snap_scaffold_15-snap.804-T1
Valid prediction for snap_scaffold_15-snap.841-T1
Valid prediction for GlimmerHMM_glimmerT_35939-T1
Valid prediction for snap_scaffold_15-snap.822-T1
Valid prediction for GlimmerHMM_glimmerT_35937-T1
Valid prediction for GlimmerHMM_glimmerT_35928-T1
Valid prediction for GlimmerHMM_glimmerT_35926-T1
Valid prediction for snap_scaffold_15-snap.825-T1
Valid prediction for Augustus_model.g23965.t1
Valid prediction for GlimmerHMM_glimmerT_35946-T1
Valid prediction for GlimmerHMM_glimmerT_35940-T1
Valid prediction for GlimmerHMM_glimmerT_35944-T1
Valid prediction for snap_scaffold_15-snap.806-T1
Valid prediction for snap_scaffold_15-snap.808-T1
Valid prediction for snap_scaffold_15-snap.811-T1
Valid prediction for GlimmerHMM_glimmerT_35924-T1
Valid prediction for snap_scaffold_15-snap.810-T1
Valid prediction for Augustus_model.g23961.t1
Valid prediction for snap_scaffold_15-snap.802-T1
Valid prediction for Augustus_model.g23962.t1
Couldn't classify 146905, 147039
Couldn't classify 151241, 151363
Sorry, prediction pasa_asmbl_15111.p1 fails validation.
(ATC)	 AG	146905-147039	GT	GGG
(AAA)	 AG	148670-148749	GT	CAG
(TTG)	 AG	148870-148923	GT	GGG
(AAT)	 AG	149053-149134	GT	AGG
(AAC)	 AG	149442-149542	GT	ATG
(CAA)	 AG	149873-149930	GT	AAG
(AAC)	 AG	151241-151363	GG	GAG
-recovered pasa_asmbl_15111.p1, internal, 146905, 147039
-recovered pasa_asmbl_15111.p1, internal, 148670, 148749
-recovered pasa_asmbl_15111.p1, internal, 148870, 148923
-recovered pasa_asmbl_15111.p1, internal, 149053, 149134
-recovered pasa_asmbl_15111.p1, internal, 149442, 149542
-recovered pasa_asmbl_15111.p1, internal, 149873, 149930
Couldn't classify 152471, 152550
Couldn't classify 153701, 153720
Sorry, prediction pasa_asmbl_15918.p1 fails validation.
(GAT)	 AG	152471-152550	GT	AGG
(TAA)	 AG	152986-153070	GT	CAG
(ATC)	 AG	153179-153269	GT	GAG
(AAC)	 AG	153394-153489	GT	CTG
(GTG)	 AG	153701-153720	AT	GGA
-recovered pasa_asmbl_15918.p1, internal, 152471, 152550
-recovered pasa_asmbl_15918.p1, internal, 152986, 153070
-recovered pasa_asmbl_15918.p1, internal, 153179, 153269
-recovered pasa_asmbl_15918.p1, internal, 153394, 153489
Valid prediction for snap_scaffold_15-snap.837-T1
Valid prediction for GlimmerHMM_glimmerT_35930-T1
Couldn't classify 97657, 97684
Couldn't classify 103925, 103945
Sorry, prediction pasa_asmbl_15108.p1 fails validation.
(AAG)	 TG	97657-97684	GT	AGG
(ATG)	 AG	98009-98124	GT	AGG
(GTT)	 AG	99620-99758	GT	AGG
(GCC)	 AG	99996-100049	GT	AGG
(ATG)	 AG	100433-100652	GT	AGG
(CAG)	 AG	101458-101626	GT	AGG
(CTG)	 AG	102511-102587	GT	AAG
(AGA)	 AG	102770-102859	GT	GAG
(GGA)	 AG	102972-103029	GT	GGG
(CTG)	 AG	103254-103340	GT	AGG
(GAG)	 AG	103925-103945	CT	ACC
add_exon() Sorry, pasa_asmbl_15108.p1 98009-98124-initial-1 is invalid.
-recovered pasa_asmbl_15108.p1, initial, 98009, 98124
add_exon() Sorry, pasa_asmbl_15108.p1 100433-100652-initial-1 is invalid.
-recovered pasa_asmbl_15108.p1, initial, 100433, 100652
-recovered pasa_asmbl_15108.p1, internal, 98009, 98124
-recovered pasa_asmbl_15108.p1, internal, 99620, 99758
-recovered pasa_asmbl_15108.p1, internal, 99996, 100049
-recovered pasa_asmbl_15108.p1, internal, 100433, 100652
-recovered pasa_asmbl_15108.p1, internal, 101458, 101626
-recovered pasa_asmbl_15108.p1, internal, 102511, 102587
-recovered pasa_asmbl_15108.p1, internal, 102770, 102859
-recovered pasa_asmbl_15108.p1, internal, 102972, 103029
-recovered pasa_asmbl_15108.p1, internal, 103254, 103340
Valid prediction for GlimmerHMM_glimmerT_35932-T1
Valid prediction for Augustus_model.g23968.t1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_15-snap.831-T1
Valid prediction for Augustus_model.g23971.t1
Valid prediction for snap_scaffold_15-snap.814-T1
Valid prediction for snap_scaffold_15-snap.840-T1
Valid prediction for GlimmerHMM_glimmerT_35935-T1
Valid prediction for Augustus_model.g23954.t1
Valid prediction for Augustus_model.g23972.t1
Couldn't classify 27667, 28209
Sorry, prediction pasa_asmbl_14120.p1 fails validation.
(TAC)	 AC	27667-28209	CC	TCC
Valid prediction for GlimmerHMM_glimmerT_35938-T1
Valid prediction for GlimmerHMM_glimmerT_35941-T1
Couldn't classify 115069, 115419
Sorry, prediction pasa_asmbl_15109.p1 fails validation.
(CCG)	 TG	115069-115419	AG	TCA
Valid prediction for snap_scaffold_15-snap.820-T1
Valid prediction for snap_scaffold_15-snap.830-T1
Valid prediction for GlimmerHMM_glimmerT_35922-T1
Valid prediction for snap_scaffold_15-snap.842-T1
Valid prediction for snap_scaffold_15-snap.833-T1
Valid prediction for snap_scaffold_15-snap.816-T1
Valid prediction for GlimmerHMM_glimmerT_35929-T1
Valid prediction for GlimmerHMM_glimmerT_35947-T1
Valid prediction for Augustus_model.g23957.t1
Valid prediction for Augustus_model.g23970.t1
Valid prediction for Augustus_model.g23969.t1
Valid prediction for GlimmerHMM_glimmerT_35934-T1
Valid prediction for snap_scaffold_15-snap.813-T1
Valid prediction for Augustus_model.g23953.t1
Valid prediction for snap_scaffold_15-snap.827-T1
Valid prediction for snap_scaffold_15-snap.805-T1
Valid prediction for snap_scaffold_15-snap.823-T1
Valid prediction for snap_scaffold_15-snap.824-T1
Valid prediction for Augustus_model.g23955.t1
Valid prediction for Augustus_model.g23959.t1
Valid prediction for snap_scaffold_15-snap.801-T1
Valid prediction for GlimmerHMM_glimmerT_35943-T1
Couldn't classify 38731, 38859
Sorry, prediction pasa_asmbl_14118.p1 fails validation.
(AGA)	 TC	38731-38859	GT	GGG
(ATA)	 AG	41401-41526	GT	AGG
(GTG)	 AG	41956-42090	GT	AGG
(GTG)	 AG	42370-42525	CC	GAC
-recovered pasa_asmbl_14118.p1, terminal, 42370, 42525
-recovered pasa_asmbl_14118.p1, internal, 41401, 41526
-recovered pasa_asmbl_14118.p1, internal, 41956, 42090
Valid prediction for GlimmerHMM_glimmerT_35945-T1
Valid prediction for snap_scaffold_15-snap.838-T1
Valid prediction for GlimmerHMM_glimmerT_35923-T1
Valid prediction for GlimmerHMM_glimmerT_35936-T1
Valid prediction for snap_scaffold_15-snap.807-T1
Valid prediction for snap_scaffold_15-snap.834-T1
Valid prediction for snap_scaffold_15-snap.818-T1
Valid prediction for snap_scaffold_15-snap.832-T1
Valid prediction for snap_scaffold_15-snap.826-T1
Valid prediction for snap_scaffold_15-snap.799-T1
Valid prediction for GlimmerHMM_glimmerT_35925-T1
Valid prediction for Augustus_model.g23966.t1
Couldn't classify 32951, 32998
Couldn't classify 35047, 35178
Sorry, prediction pasa_asmbl_14119.p1 fails validation.
(CCC)	 CC	32951-32998	GT	AGG
(GGG)	 AG	33075-33216	GT	AGG
(GTG)	 AG	33650-33804	GT	AGG
(GTG)	 AG	35047-35178	AG	CGA
-recovered pasa_asmbl_14119.p1, internal, 33075, 33216
-recovered pasa_asmbl_14119.p1, internal, 33650, 33804
Valid prediction for snap_scaffold_15-snap.821-T1
Valid prediction for Augustus_model.g23963.t1
Valid prediction for snap_scaffold_15-snap.803-T1
Valid prediction for GlimmerHMM_glimmerT_35933-T1
Valid prediction for snap_scaffold_15-snap.809-T1
Valid prediction for Augustus_model.g23967.t1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 6441, rend_intergenic: 4068  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 16547, rend_intergenic: 14838  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 19355, rend_intergenic: 17477  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 21296, rend_intergenic: 19362  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 33747, rend_intergenic: 27362  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 40409, rend_intergenic: 34532  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 49149, rend_intergenic: 43178  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 56093, rend_intergenic: 50308  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 62537, rend_intergenic: 56683  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 69290, rend_intergenic: 64429  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 81154, rend_intergenic: 70747  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 99079, rend_intergenic: 81855  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 99369, rend_intergenic: 99284  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 112748, rend_intergenic: 100007  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 128683, rend_intergenic: 122029  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 132200, rend_intergenic: 128792  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 170016, rend_intergenic: 137511  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 203641, rend_intergenic: 185391  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 209032, rend_intergenic: 205914  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 210724, rend_intergenic: 209032  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 221453, rend_intergenic: 210784  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: GlimmerHMM lend_intergenic: 207136, rend_intergenic: 207133  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 226479
-exon list size: 471


building trellis

0.2    
0.4    
0.6    
0.8    
1.1    
1.3    
1.5    
1.7    
1.9    
2.1    
2.3    
2.5    
2.7    
3.0    
3.2    
3.4    
3.6    
3.8    
4.0    
4.2    
4.4    
4.7    
4.9    
5.1    
5.3    
5.5    
5.7    
5.9    
6.1    
6.3    
6.6    
6.8    
7.0    
7.2    
7.4    
7.6    
7.8    
8.0    
8.2    
8.5    
8.7    
8.9    
9.1    
9.3    
9.5    
9.7    
9.9    
10.1    
10.4    
10.6    
10.8    
11.0    
11.2    
11.4    
11.6    
11.8    
12.1    
12.3    
12.5    
12.7    
12.9    
13.1    
13.3    
13.5    
13.7    
14.0    
14.2    
14.4    
14.6    
14.8    
15.0    
15.2    
15.4    
15.6    
15.9    
16.1    
16.3    
16.5    
16.7    
16.9    
17.1    
17.3    
17.5    
17.8    
18.0    
18.2    
18.4    
18.6    
18.8    
19.0    
19.2    
19.5    
19.7    
19.9    
20.1    
20.3    
20.5    
20.7    
20.9    
21.1    
21.4    
21.6    
21.8    
22.0    
22.2    
22.4    
22.6    
22.8    
23.0    
23.3    
23.5    
23.7    
23.9    
24.1    
24.3    
24.5    
24.7    
24.9    
25.2    
25.4    
25.6    
25.8    
26.0    
26.2    
26.4    
26.6    
26.8    
27.1    
27.3    
27.5    
27.7    
27.9    
28.1    
28.3    
28.5    
28.8    
29.0    
29.2    
29.4    
29.6    
29.8    
30.0    
30.2    
30.4    
30.7    
30.9    
31.1    
31.3    
31.5    
31.7    
31.9    
32.1    
32.3    
32.6    
32.8    
33.0    
33.2    
33.4    
33.6    
33.8    
34.0    
34.2    
34.5    
34.7    
34.9    
35.1    
35.3    
35.5    
35.7    
35.9    
36.2    
36.4    
36.6    
36.8    
37.0    
37.2    
37.4    
37.6    
37.8    
38.1    
38.3    
38.5    
38.7    
38.9    
39.1    
39.3    
39.5    
39.7    
40.0    
40.2    
40.4    
40.6    
40.8    
41.0    
41.2    
41.4    
41.6    
41.9    
42.1    
42.3    
42.5    
42.7    
42.9    
43.1    
43.3    
43.6    
43.8    
44.0    
44.2    
44.4    
44.6    
44.8    
45.0    
45.2    
45.5    
45.7    
45.9    
46.1    
46.3    
46.5    
46.7    
46.9    
47.1    
47.4    
47.6    
47.8    
48.0    
48.2    
48.4    
48.6    
48.8    
49.0    
49.3    
49.5    
49.7    
49.9    
50.1    
50.3    
50.5    
50.7    
51.0    
51.2    
51.4    
51.6    
51.8    
52.0    
52.2    
52.4    
52.6    
52.9    
53.1    
53.3    
53.5    
53.7    
53.9    
54.1    
54.3    
54.5    
54.8    
55.0    
55.2    
55.4    
55.6    
55.8    
56.0    
56.2    
56.4    
56.7    
56.9    
57.1    
57.3    
57.5    
57.7    
57.9    
58.1    
58.4    
58.6    
58.8    
59.0    
59.2    
59.4    
59.6    
59.8    
60.0    
60.3    
60.5    
60.7    
60.9    
61.1    
61.3    
61.5    
61.7    
61.9    
62.2    
62.4    
62.6    
62.8    
63.0    
63.2    
63.4    
63.6    
63.8    
64.1    
64.3    
64.5    
64.7    
64.9    
65.1    
65.3    
65.5    
65.8    
66.0    
66.2    
66.4    
66.6    
66.8    
67.0    
67.2    
67.4    
67.7    
67.9    
68.1    
68.3    
68.5    
68.7    
68.9    
69.1    
69.3    
69.6    
69.8    
70.0    
70.2    
70.4    
70.6    
70.8    
71.0    
71.2    
71.5    
71.7    
71.9    
72.1    
72.3    
72.5    
72.7    
72.9    
73.2    
73.4    
73.6    
73.8    
74.0    
74.2    
74.4    
74.6    
74.8    
75.1    
75.3    
75.5    
75.7    
75.9    
76.1    
76.3    
76.5    
76.7    
77.0    
77.2    
77.4    
77.6    
77.8    
78.0    
78.2    
78.4    
78.6    
78.9    
79.1    
79.3    
79.5    
79.7    
79.9    
80.1    
80.3    
80.5    
80.8    
81.0    
81.2    
81.4    
81.6    
81.8    
82.0    
82.2    
82.5    
82.7    
82.9    
83.1    
83.3    
83.5    
83.7    
83.9    
84.1    
84.4    
84.6    
84.8    
85.0    
85.2    
85.4    
85.6    
85.8    
86.0    
86.3    
86.5    
86.7    
86.9    
87.1    
87.3    
87.5    
87.7    
87.9    
88.2    
88.4    
88.6    
88.8    
89.0    
89.2    
89.4    
89.6    
89.9    
90.1    
90.3    
90.5    
90.7    
90.9    
91.1    
91.3    
91.5    
91.8    
92.0    
92.2    
92.4    
92.6    
92.8    
93.0    
93.2    
93.4    
93.7    
93.9    
94.1    
94.3    
94.5    
94.7    
94.9    
95.1    
95.3    
95.6    
95.8    
96.0    
96.2    
96.4    
96.6    
96.8    
97.0    
97.3    
97.5    
97.7    
97.9    
98.1    
98.3    
98.5    
98.7    
98.9    
99.2    
99.4    
99.6    
99.8    
-found 29 predictions from path traversal
Error with prediction: snap lend_intergenic: 6441, rend_intergenic: 4068  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 16547, rend_intergenic: 14838  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 19355, rend_intergenic: 17477  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 21296, rend_intergenic: 19362  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 33747, rend_intergenic: 27362  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 40409, rend_intergenic: 34532  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 49149, rend_intergenic: 43178  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 56093, rend_intergenic: 50308  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 62537, rend_intergenic: 56683  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 69290, rend_intergenic: 64429  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 81154, rend_intergenic: 70747  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 99079, rend_intergenic: 81855  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 99369, rend_intergenic: 99284  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 112748, rend_intergenic: 100007  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 128683, rend_intergenic: 122029  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 132200, rend_intergenic: 128792  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 170016, rend_intergenic: 137511  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 203641, rend_intergenic: 185391  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 209032, rend_intergenic: 205914  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 210724, rend_intergenic: 209032  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 221453, rend_intergenic: 210784  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: GlimmerHMM lend_intergenic: 207136, rend_intergenic: 207133  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 13 predictions persist after filtering for low support