-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_15/scaffold_15_11045582-11227968 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for Augustus_model.g24594.t1 Valid prediction for Augustus_model.g24590.t1 Valid prediction for CodingQuarry_transcript_18138-T1 Valid prediction for GlimmerHMM_glimmerT_36921-T1 Couldn't classify 70214, 70231 Couldn't classify 71507, 71623 Sorry, prediction pasa_asmbl_15481.p1 fails validation. (CTG) TG 70214-70231 GT AGG (GTG) AG 70445-70534 GT AGG (GTC) AG 70681-70757 GT AGG (CAT) AG 70911-70986 GT AGG (CAT) AG 71259-71420 GT AGG (GAC) AG 71507-71623 CA GCC -recovered pasa_asmbl_15481.p1, internal, 70445, 70534 -recovered pasa_asmbl_15481.p1, internal, 70681, 70757 -recovered pasa_asmbl_15481.p1, internal, 70911, 70986 -recovered pasa_asmbl_15481.p1, internal, 71259, 71420 Valid prediction for snap_scaffold_15-snap.2289-T1 Couldn't classify 67849, 67979 Couldn't classify 69622, 69653 Sorry, prediction pasa_asmbl_15480.p1 fails validation. (TCT) GC 67849-67979 GT ATG (GCA) AG 68534-68612 GT AGG (TCG) AG 68911-69046 GT AGG (GCC) AG 69257-69418 GT CGG (GGT) AG 69622-69653 CG AAC add_exon() Sorry, pasa_asmbl_15480.p1 68911-69046-terminal-3 is invalid. -recovered pasa_asmbl_15480.p1, terminal, 68911, 69046 -recovered pasa_asmbl_15480.p1, internal, 68534, 68612 -recovered pasa_asmbl_15480.p1, internal, 68911, 69046 -recovered pasa_asmbl_15480.p1, internal, 69257, 69418 Couldn't classify 122247, 123201 Sorry, prediction pasa_asmbl_15486.p1 fails validation. (CGT) TC 122247-123201 GT AGG (GGC) AG 124569-124658 GT AGG (AGT) AG 127477-127571 CC AAC -recovered pasa_asmbl_15486.p1, terminal, 127477, 127571 -recovered pasa_asmbl_15486.p1, internal, 124569, 124658 Valid prediction for GlimmerHMM_glimmerT_36938-T1 Valid prediction for snap_scaffold_15-snap.2282-T1 Valid prediction for snap_scaffold_15-snap.2280-T1 Couldn't classify 64595, 64607 Sorry, prediction pasa_asmbl_15479.p1 fails validation. (ATG) AC 62353-62459 GT GGG (GTA) AG 62771-62921 GT CTG (TTT) AG 64322-64443 GT AAG (CAT) AG 64595-64607 GG CGG -recovered pasa_asmbl_15479.p1, initial, 62353, 62459 -recovered pasa_asmbl_15479.p1, internal, 62771, 62921 -recovered pasa_asmbl_15479.p1, internal, 64322, 64443 Valid prediction for snap_scaffold_15-snap.2286-T1 Valid prediction for GlimmerHMM_glimmerT_36925-T1 Valid prediction for Augustus_model.g24603.t1 Valid prediction for snap_scaffold_15-snap.2291-T1 Valid prediction for Augustus_model.g24602.t1 Valid prediction for Augustus_model.g24600.t1 Valid prediction for GlimmerHMM_glimmerT_36934-T1 Valid prediction for GlimmerHMM_glimmerT_36950-T1 Valid prediction for snap_scaffold_15-snap.2296-T1 Valid prediction for Augustus_model.g24606.t1 Couldn't classify 120046, 120065 Couldn't classify 121563, 122174 Sorry, prediction pasa_asmbl_15484.p1 fails validation. (ATG) CG 116250-116345 GT AGG (GTT) AG 117546-117593 GT AAG (GGC) AG 118337-118469 GT GGG (GGG) AG 120046-120065 AT ACA (ATT) AC 121563-122174 CC CCC -recovered pasa_asmbl_15484.p1, initial, 116250, 116345 -recovered pasa_asmbl_15484.p1, internal, 117546, 117593 -recovered pasa_asmbl_15484.p1, internal, 118337, 118469 Valid prediction for Augustus_model.g24587.t1 Valid prediction for GlimmerHMM_glimmerT_36946-T1 Valid prediction for snap_scaffold_15-snap.2292-T1 Valid prediction for GlimmerHMM_glimmerT_36918-T1 Valid prediction for GlimmerHMM_glimmerT_36943-T1 Valid prediction for GlimmerHMM_glimmerT_36944-T1 Valid prediction for GlimmerHMM_glimmerT_36937-T1 Valid prediction for snap_scaffold_15-snap.2281-T1 Valid prediction for GlimmerHMM_glimmerT_36923-T1 Valid prediction for snap_scaffold_15-snap.2265-T1 Valid prediction for snap_scaffold_15-snap.2283-T1 Valid prediction for Augustus_model.g24598.t1 Valid prediction for snap_scaffold_15-snap.2268-T1 Valid prediction for snap_scaffold_15-snap.2278-T1 Valid prediction for Augustus_model.g24608.t1 Valid prediction for Augustus_model.g24609.t1 Couldn't classify 71624, 71638 Sorry, prediction pasa_asmbl_15482.p1 fails validation. (CAG) GC 71624-71638 GT AGG (GTG) AG 71926-71993 GT AAG (ACT) AG 72468-72595 GT AGG (ATG) AG 72752-72843 GT AGG (AAG) AG 72938-72986 GT TGG (TGG) AG 73074-73180 GT GGG (GCC) AG 73315-73364 GT AGG (GCC) AG 73460-73565 GA AGG -recovered pasa_asmbl_15482.p1, initial, 72752, 72843 -recovered pasa_asmbl_15482.p1, terminal, 73460, 73565 -recovered pasa_asmbl_15482.p1, internal, 71926, 71993 -recovered pasa_asmbl_15482.p1, internal, 72468, 72595 -recovered pasa_asmbl_15482.p1, internal, 72752, 72843 -recovered pasa_asmbl_15482.p1, internal, 72938, 72986 -recovered pasa_asmbl_15482.p1, internal, 73074, 73180 -recovered pasa_asmbl_15482.p1, internal, 73315, 73364 Valid prediction for GlimmerHMM_glimmerT_36929-T1 Valid prediction for snap_scaffold_15-snap.2303-T1 Valid prediction for GlimmerHMM_glimmerT_36945-T1 Valid prediction for snap_scaffold_15-snap.2277-T1 Valid prediction for Augustus_model.g24592.t1 Valid prediction for snap_scaffold_15-snap.2298-T1 Valid prediction for snap_scaffold_15-snap.2301-T1 Valid prediction for snap_scaffold_15-snap.2270-T1 Valid prediction for GlimmerHMM_glimmerT_36930-T1 Valid prediction for GlimmerHMM_glimmerT_36948-T1 Valid prediction for GlimmerHMM_glimmerT_36933-T1 Valid prediction for Augustus_model.g24596.t1 -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_15-snap.2295-T1 Valid prediction for snap_scaffold_15-snap.2290-T1 Valid prediction for snap_scaffold_15-snap.2299-T1 Valid prediction for GlimmerHMM_glimmerT_36949-T1 Valid prediction for snap_scaffold_15-snap.2294-T1 Valid prediction for snap_scaffold_15-snap.2293-T1 Valid prediction for snap_scaffold_15-snap.2279-T1 Valid prediction for pasa_asmbl_14488.p1 Valid prediction for snap_scaffold_15-snap.2272-T1 Couldn't classify 82250, 82334 Couldn't classify 83477, 83580 Sorry, prediction CodingQuarry_transcript_18141-T1 fails validation. (ATG) TA 79654-79665 GT AGG (GCG) AG 81650-81736 GT AGG (AGT) AG 82250-82334 CC GGC (TTC) CT 83477-83580 GT AGG (GCC) AG 85687-85852 GT AGG (CTA) AG 86028-86063 GT AGG (GTG) AG 86801-86939 GT AAG (ATT) AG 87155-87239 GT ATG (ATG) AG 87481-87606 GT ATG (ACC) AG 87742-87859 GT AGG (GTC) AG 87987-88117 GT AGG (GAC) AG 88221-88324 GT GTG (GGA) AG 88475-88578 GT ACG (CTT) AG 88670-88747 GT AGG (GAG) AG 89017-89093 GT AGG (CCC) AG 90206-90295 GT AGG (GCT) AG 90392-90506 GT AGG (CCG) AG 90765-90856 GT CGG (ATT) AG 91060-91107 GC AAG -recovered CodingQuarry_transcript_18141-T1, initial, 79654, 79665 -recovered CodingQuarry_transcript_18141-T1, initial, 87481, 87606 -recovered CodingQuarry_transcript_18141-T1, terminal, 91060, 91107 -recovered CodingQuarry_transcript_18141-T1, internal, 81650, 81736 -recovered CodingQuarry_transcript_18141-T1, internal, 85687, 85852 -recovered CodingQuarry_transcript_18141-T1, internal, 86028, 86063 -recovered CodingQuarry_transcript_18141-T1, internal, 86801, 86939 -recovered CodingQuarry_transcript_18141-T1, internal, 87155, 87239 -recovered CodingQuarry_transcript_18141-T1, internal, 87481, 87606 -recovered CodingQuarry_transcript_18141-T1, internal, 87742, 87859 -recovered CodingQuarry_transcript_18141-T1, internal, 87987, 88117 -recovered CodingQuarry_transcript_18141-T1, internal, 88221, 88324 -recovered CodingQuarry_transcript_18141-T1, internal, 88475, 88578 -recovered CodingQuarry_transcript_18141-T1, internal, 88670, 88747 -recovered CodingQuarry_transcript_18141-T1, internal, 89017, 89093 -recovered CodingQuarry_transcript_18141-T1, internal, 90206, 90295 -recovered CodingQuarry_transcript_18141-T1, internal, 90392, 90506 -recovered CodingQuarry_transcript_18141-T1, internal, 90765, 90856 -recovered CodingQuarry_transcript_18141-T1, internal, 91060, 91107 Valid prediction for Augustus_model.g24595.t1 Valid prediction for HiQ_model.g24599.t1 Valid prediction for Augustus_model.g24607.t1 Valid prediction for snap_scaffold_15-snap.2284-T1 Valid prediction for snap_scaffold_15-snap.2285-T1 Valid prediction for GlimmerHMM_glimmerT_36941-T1 Valid prediction for GlimmerHMM_glimmerT_36940-T1 Valid prediction for GlimmerHMM_glimmerT_36935-T1 Couldn't classify 82250, 82334 Couldn't classify 83477, 83580 Sorry, prediction CodingQuarry_transcript_18140-T1 fails validation. (ATG) TA 79654-79665 GT AGG (GCG) AG 81650-81736 GT AGG (AGT) AG 82250-82334 CC GGC (TTC) CT 83477-83580 GT AGG (GAA) AG 84179-84259 GT AGG (GCC) AG 85687-85852 GT AGG (GTG) AG 86801-86939 GT AAG (ATT) AG 87155-87239 GT ATG (ATG) AG 87481-87606 GT ATG (ACC) AG 87742-87859 GT AGG (GTC) AG 87987-88117 GT AGG (GAC) AG 88221-88324 GT GTG (GGA) AG 88475-88578 GT ACG (CTT) AG 88670-88747 GT AGG (GAG) AG 89017-89093 GT AGG (CCC) AG 90206-90295 GT AGG (GCT) AG 90392-90506 GT AGG (CCG) AG 90765-90856 GT CGG (ATT) AG 91060-91107 GC AAG -recovered CodingQuarry_transcript_18140-T1, initial, 79654, 79665 -recovered CodingQuarry_transcript_18140-T1, initial, 87481, 87606 -recovered CodingQuarry_transcript_18140-T1, terminal, 91060, 91107 -recovered CodingQuarry_transcript_18140-T1, internal, 81650, 81736 -recovered CodingQuarry_transcript_18140-T1, internal, 84179, 84259 -recovered CodingQuarry_transcript_18140-T1, internal, 85687, 85852 -recovered CodingQuarry_transcript_18140-T1, internal, 86801, 86939 -recovered CodingQuarry_transcript_18140-T1, internal, 87155, 87239 -recovered CodingQuarry_transcript_18140-T1, internal, 87481, 87606 -recovered CodingQuarry_transcript_18140-T1, internal, 87742, 87859 -recovered CodingQuarry_transcript_18140-T1, internal, 87987, 88117 -recovered CodingQuarry_transcript_18140-T1, internal, 88221, 88324 -recovered CodingQuarry_transcript_18140-T1, internal, 88475, 88578 -recovered CodingQuarry_transcript_18140-T1, internal, 88670, 88747 -recovered CodingQuarry_transcript_18140-T1, internal, 89017, 89093 -recovered CodingQuarry_transcript_18140-T1, internal, 90206, 90295 -recovered CodingQuarry_transcript_18140-T1, internal, 90392, 90506 -recovered CodingQuarry_transcript_18140-T1, internal, 90765, 90856 -recovered CodingQuarry_transcript_18140-T1, internal, 91060, 91107 Valid prediction for snap_scaffold_15-snap.2271-T1 Valid prediction for GlimmerHMM_glimmerT_36951-T1 Valid prediction for snap_scaffold_15-snap.2267-T1 Valid prediction for snap_scaffold_15-snap.2288-T1 Valid prediction for Augustus_model.g24593.t1 Valid prediction for Augustus_model.g24601.t1 Valid prediction for GlimmerHMM_glimmerT_36939-T1 Valid prediction for GlimmerHMM_glimmerT_36926-T1 Valid prediction for snap_scaffold_15-snap.2300-T1 Valid prediction for GlimmerHMM_glimmerT_36932-T1 Valid prediction for GlimmerHMM_glimmerT_36947-T1 Valid prediction for snap_scaffold_15-snap.2297-T1 Couldn't classify 82250, 82334 Couldn't classify 83477, 83580 Sorry, prediction CodingQuarry_transcript_18142-T1 fails validation. (ATG) TA 79654-79665 GT AGG (GCG) AG 81650-81736 GT AGG (AGT) AG 82250-82334 CC GGC (TTC) CT 83477-83580 GT AGG (GCC) AG 85687-85852 GT AGG (CTA) AG 86028-86063 GT AGG (GTG) AG 86801-86939 GT AAG (CAG) AG 87152-87239 GT ATG (ATG) AG 87481-87606 GT ATG (ACC) AG 87742-87859 GT AGG (GTC) AG 87987-88117 GT AGG (GAC) AG 88221-88324 GT GTG (GGA) AG 88475-88578 GT ACG (CTT) AG 88670-88747 GT AGG (GAG) AG 89017-89093 GT AGG (CCC) AG 90206-90295 GT AGG (GCT) AG 90392-90506 GT AGG (CCG) AG 90765-90856 GT CGG (ATT) AG 91060-91107 GC AAG -recovered CodingQuarry_transcript_18142-T1, initial, 79654, 79665 -recovered CodingQuarry_transcript_18142-T1, initial, 87481, 87606 -recovered CodingQuarry_transcript_18142-T1, terminal, 91060, 91107 -recovered CodingQuarry_transcript_18142-T1, internal, 81650, 81736 -recovered CodingQuarry_transcript_18142-T1, internal, 85687, 85852 -recovered CodingQuarry_transcript_18142-T1, internal, 86028, 86063 -recovered CodingQuarry_transcript_18142-T1, internal, 86801, 86939 -recovered CodingQuarry_transcript_18142-T1, internal, 87152, 87239 -recovered CodingQuarry_transcript_18142-T1, internal, 87481, 87606 -recovered CodingQuarry_transcript_18142-T1, internal, 87742, 87859 -recovered CodingQuarry_transcript_18142-T1, internal, 87987, 88117 -recovered CodingQuarry_transcript_18142-T1, internal, 88221, 88324 -recovered CodingQuarry_transcript_18142-T1, internal, 88475, 88578 -recovered CodingQuarry_transcript_18142-T1, internal, 88670, 88747 -recovered CodingQuarry_transcript_18142-T1, internal, 89017, 89093 -recovered CodingQuarry_transcript_18142-T1, internal, 90206, 90295 -recovered CodingQuarry_transcript_18142-T1, internal, 90392, 90506 -recovered CodingQuarry_transcript_18142-T1, internal, 90765, 90856 -recovered CodingQuarry_transcript_18142-T1, internal, 91060, 91107 Valid prediction for snap_scaffold_15-snap.2273-T1 Valid prediction for GlimmerHMM_glimmerT_36927-T1 Valid prediction for Augustus_model.g24591.t1 Couldn't classify 173771, 173878 Sorry, prediction pasa_asmbl_14475.p1 fails validation. (ATG) AG 170350-170380 GT GAG (GCT) AG 171324-171356 GT AGG (AGG) AG 171700-171791 GT CGG (CCC) AG 172053-172157 GT AGG (AAG) AG 172373-172503 GT AGG (GCC) AG 172780-172905 GT CGG (GTG) AG 173104-173261 GT CGG (CTC) AG 173349-173482 GT TGG (AGT) AG 173771-173878 AC CCA -recovered pasa_asmbl_14475.p1, initial, 170350, 170380 -recovered pasa_asmbl_14475.p1, internal, 170350, 170380 -recovered pasa_asmbl_14475.p1, internal, 171324, 171356 -recovered pasa_asmbl_14475.p1, internal, 171700, 171791 -recovered pasa_asmbl_14475.p1, internal, 172053, 172157 -recovered pasa_asmbl_14475.p1, internal, 172373, 172503 -recovered pasa_asmbl_14475.p1, internal, 172780, 172905 -recovered pasa_asmbl_14475.p1, internal, 173104, 173261 -recovered pasa_asmbl_14475.p1, internal, 173349, 173482 Valid prediction for HiQ_model.g24588.t1 Valid prediction for GlimmerHMM_glimmerT_36924-T1 Valid prediction for snap_scaffold_15-snap.2276-T1 Valid prediction for snap_scaffold_15-snap.2287-T1 Valid prediction for GlimmerHMM_glimmerT_36928-T1 Valid prediction for Augustus_model.g24589.t1 Valid prediction for Augustus_model.g24605.t1 Couldn't classify 82250, 82334 Couldn't classify 83477, 83580 Sorry, prediction CodingQuarry_transcript_18143-T1 fails validation. (ATG) TA 79654-79665 GT AGG (GCG) AG 81650-81736 GT AGG (AGT) AG 82250-82334 CC GGC (TTC) CT 83477-83580 GT AGG (GAA) AG 84179-84259 GT AGG (GCC) AG 85687-85783 GC AGG (CTA) AG 86028-86063 GT AGG (GTG) AG 86801-86939 GT AAG (ATT) AG 87155-87239 GT ATG (ATG) AG 87481-87606 GT ATG (ACC) AG 87742-87859 GT AGG (GTC) AG 87987-88117 GT AGG (GAC) AG 88221-88324 GT GTG (GGA) AG 88475-88578 GT ACG (CTT) AG 88670-88747 GT AGG (GAG) AG 89017-89093 GT AGG (CCC) AG 90206-90295 GT AGG (GCT) AG 90392-90506 GT AGG (CCG) AG 90765-90856 GT CGG (ATT) AG 91060-91107 GC AAG -recovered CodingQuarry_transcript_18143-T1, initial, 79654, 79665 -recovered CodingQuarry_transcript_18143-T1, initial, 87481, 87606 -recovered CodingQuarry_transcript_18143-T1, terminal, 91060, 91107 -recovered CodingQuarry_transcript_18143-T1, internal, 81650, 81736 -recovered CodingQuarry_transcript_18143-T1, internal, 84179, 84259 -recovered CodingQuarry_transcript_18143-T1, internal, 85687, 85783 -recovered CodingQuarry_transcript_18143-T1, internal, 86028, 86063 -recovered CodingQuarry_transcript_18143-T1, internal, 86801, 86939 -recovered CodingQuarry_transcript_18143-T1, internal, 87155, 87239 -recovered CodingQuarry_transcript_18143-T1, internal, 87481, 87606 -recovered CodingQuarry_transcript_18143-T1, internal, 87742, 87859 -recovered CodingQuarry_transcript_18143-T1, internal, 87987, 88117 -recovered CodingQuarry_transcript_18143-T1, internal, 88221, 88324 -recovered CodingQuarry_transcript_18143-T1, internal, 88475, 88578 -recovered CodingQuarry_transcript_18143-T1, internal, 88670, 88747 -recovered CodingQuarry_transcript_18143-T1, internal, 89017, 89093 -recovered CodingQuarry_transcript_18143-T1, internal, 90206, 90295 -recovered CodingQuarry_transcript_18143-T1, internal, 90392, 90506 -recovered CodingQuarry_transcript_18143-T1, internal, 90765, 90856 -recovered CodingQuarry_transcript_18143-T1, internal, 91060, 91107 Valid prediction for GlimmerHMM_glimmerT_36942-T1 Valid prediction for snap_scaffold_15-snap.2275-T1 Valid prediction for snap_scaffold_15-snap.2274-T1 Valid prediction for GlimmerHMM_glimmerT_36920-T1 Valid prediction for snap_scaffold_15-snap.2302-T1 Valid prediction for GlimmerHMM_glimmerT_36931-T1 Couldn't classify 168397, 168449 Sorry, prediction pasa_asmbl_14477.p1 fails validation. (CAG) CT 168397-168449 GT ATG (GCA) AG 168538-168599 GT AGG (GTG) AG 168824-168938 GT GAG (ATA) AG 169112-169193 GA GAG add_exon() Sorry, pasa_asmbl_14477.p1 168824-168938-terminal-3 is invalid. -recovered pasa_asmbl_14477.p1, terminal, 168824, 168938 -recovered pasa_asmbl_14477.p1, terminal, 169112, 169193 -recovered pasa_asmbl_14477.p1, internal, 168538, 168599 -recovered pasa_asmbl_14477.p1, internal, 168824, 168938 Couldn't classify 167834, 167983 Sorry, prediction pasa_asmbl_14478.p1 fails validation. (ATG) GC 166451-166477 GT AGG (ATT) AG 166615-166698 GT AGG (GCT) AG 167081-167203 GT AGG (GCT) AG 167353-167481 GT AGG (GTT) AG 167622-167720 GT AGG (ATC) AG 167834-167983 GT CAG -recovered pasa_asmbl_14478.p1, initial, 166451, 166477 -recovered pasa_asmbl_14478.p1, internal, 166615, 166698 -recovered pasa_asmbl_14478.p1, internal, 167081, 167203 -recovered pasa_asmbl_14478.p1, internal, 167353, 167481 -recovered pasa_asmbl_14478.p1, internal, 167622, 167720 -recovered pasa_asmbl_14478.p1, internal, 167834, 167983 Valid prediction for Augustus_model.g24604.t1 Valid prediction for GlimmerHMM_glimmerT_36919-T1 Couldn't classify 174165, 174296 Sorry, prediction pasa_asmbl_14472.p1 fails validation. (AAT) CA 174165-174296 GT TGG (ACG) AG 174438-174518 GT TGG (AAG) AG 174751-174876 GT AGG (CTG) AG 175095-175277 GT AGG (TGT) AG 175475-175572 GT AGG (TTG) AG 175719-175824 GT GAG -recovered pasa_asmbl_14472.p1, terminal, 175719, 175824 -recovered pasa_asmbl_14472.p1, internal, 174438, 174518 -recovered pasa_asmbl_14472.p1, internal, 174751, 174876 -recovered pasa_asmbl_14472.p1, internal, 175095, 175277 -recovered pasa_asmbl_14472.p1, internal, 175475, 175572 -recovered pasa_asmbl_14472.p1, internal, 175719, 175824 Valid prediction for snap_scaffold_15-snap.2266-T1 Valid prediction for Augustus_model.g24597.t1 Valid prediction for GlimmerHMM_glimmerT_36936-T1 Valid prediction for GlimmerHMM_glimmerT_36922-T1 Valid prediction for snap_scaffold_15-snap.2269-T1 -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: snap lend_intergenic: 19898, rend_intergenic: 18501 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 75924, rend_intergenic: 53855 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 88678, rend_intergenic: 86981 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 123275, rend_intergenic: 115898 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 127185, rend_intergenic: 123856 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 136529, rend_intergenic: 132699 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 143535, rend_intergenic: 141592 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 148684, rend_intergenic: 147468 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 158721, rend_intergenic: 156689 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 164813, rend_intergenic: 159099 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 166441, rend_intergenic: 164888 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 171701, rend_intergenic: 167163 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 175981, rend_intergenic: 172019 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 177583, rend_intergenic: 176640 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 180527, rend_intergenic: 178099 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 182387 -exon list size: 510 building trellis 0.2 0.4 0.6 0.8 1.0 1.2 1.4 1.6 1.8 2.0 2.1 2.3 2.5 2.7 2.9 3.1 3.3 3.5 3.7 3.9 4.1 4.3 4.5 4.7 4.9 5.1 5.3 5.5 5.7 5.9 6.1 6.2 6.4 6.6 6.8 7.0 7.2 7.4 7.6 7.8 8.0 8.2 8.4 8.6 8.8 9.0 9.2 9.4 9.6 9.8 10.0 10.2 10.4 10.5 10.7 10.9 11.1 11.3 11.5 11.7 11.9 12.1 12.3 12.5 12.7 12.9 13.1 13.3 13.5 13.7 13.9 14.1 14.3 14.5 14.6 14.8 15.0 15.2 15.4 15.6 15.8 16.0 16.2 16.4 16.6 16.8 17.0 17.2 17.4 17.6 17.8 18.0 18.2 18.4 18.6 18.8 18.9 19.1 19.3 19.5 19.7 19.9 20.1 20.3 20.5 20.7 20.9 21.1 21.3 21.5 21.7 21.9 22.1 22.3 22.5 22.7 22.9 23.0 23.2 23.4 23.6 23.8 24.0 24.2 24.4 24.6 24.8 25.0 25.2 25.4 25.6 25.8 26.0 26.2 26.4 26.6 26.8 27.0 27.1 27.3 27.5 27.7 27.9 28.1 28.3 28.5 28.7 28.9 29.1 29.3 29.5 29.7 29.9 30.1 30.3 30.5 30.7 30.9 31.1 31.2 31.4 31.6 31.8 32.0 32.2 32.4 32.6 32.8 33.0 33.2 33.4 33.6 33.8 34.0 34.2 34.4 34.6 34.8 35.0 35.2 35.4 35.5 35.7 35.9 36.1 36.3 36.5 36.7 36.9 37.1 37.3 37.5 37.7 37.9 38.1 38.3 38.5 38.7 38.9 39.1 39.3 39.5 39.6 39.8 40.0 40.2 40.4 40.6 40.8 41.0 41.2 41.4 41.6 41.8 42.0 42.2 42.4 42.6 42.8 43.0 43.2 43.4 43.6 43.8 43.9 44.1 44.3 44.5 44.7 44.9 45.1 45.3 45.5 45.7 45.9 46.1 46.3 46.5 46.7 46.9 47.1 47.3 47.5 47.7 47.9 48.0 48.2 48.4 48.6 48.8 49.0 49.2 49.4 49.6 49.8 50.0 50.2 50.4 50.6 50.8 51.0 51.2 51.4 51.6 51.8 52.0 52.1 52.3 52.5 52.7 52.9 53.1 53.3 53.5 53.7 53.9 54.1 54.3 54.5 54.7 54.9 55.1 55.3 55.5 55.7 55.9 56.1 56.2 56.4 56.6 56.8 57.0 57.2 57.4 57.6 57.8 58.0 58.2 58.4 58.6 58.8 59.0 59.2 59.4 59.6 59.8 60.0 60.2 60.4 60.5 60.7 60.9 61.1 61.3 61.5 61.7 61.9 62.1 62.3 62.5 62.7 62.9 63.1 63.3 63.5 63.7 63.9 64.1 64.3 64.5 64.6 64.8 65.0 65.2 65.4 65.6 65.8 66.0 66.2 66.4 66.6 66.8 67.0 67.2 67.4 67.6 67.8 68.0 68.2 68.4 68.6 68.8 68.9 69.1 69.3 69.5 69.7 69.9 70.1 70.3 70.5 70.7 70.9 71.1 71.3 71.5 71.7 71.9 72.1 72.3 72.5 72.7 72.9 73.0 73.2 73.4 73.6 73.8 74.0 74.2 74.4 74.6 74.8 75.0 75.2 75.4 75.6 75.8 76.0 76.2 76.4 76.6 76.8 77.0 77.1 77.3 77.5 77.7 77.9 78.1 78.3 78.5 78.7 78.9 79.1 79.3 79.5 79.7 79.9 80.1 80.3 80.5 80.7 80.9 81.1 81.2 81.4 81.6 81.8 82.0 82.2 82.4 82.6 82.8 83.0 83.2 83.4 83.6 83.8 84.0 84.2 84.4 84.6 84.8 85.0 85.2 85.4 85.5 85.7 85.9 86.1 86.3 86.5 86.7 86.9 87.1 87.3 87.5 87.7 87.9 88.1 88.3 88.5 88.7 88.9 89.1 89.3 89.5 89.6 89.8 90.0 90.2 90.4 90.6 90.8 91.0 91.2 91.4 91.6 91.8 92.0 92.2 92.4 92.6 92.8 93.0 93.2 93.4 93.6 93.8 93.9 94.1 94.3 94.5 94.7 94.9 95.1 95.3 95.5 95.7 95.9 96.1 96.3 96.5 96.7 96.9 97.1 97.3 97.5 97.7 97.9 98.0 98.2 98.4 98.6 98.8 99.0 99.2 99.4 99.6 99.8 -found 35 predictions from path traversal Error with prediction: snap lend_intergenic: 19898, rend_intergenic: 18501 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 75924, rend_intergenic: 53855 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 88678, rend_intergenic: 86981 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 123275, rend_intergenic: 115898 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 127185, rend_intergenic: 123856 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 136529, rend_intergenic: 132699 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 143535, rend_intergenic: 141592 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 148684, rend_intergenic: 147468 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 158721, rend_intergenic: 156689 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 164813, rend_intergenic: 159099 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 166441, rend_intergenic: 164888 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 171701, rend_intergenic: 167163 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 175981, rend_intergenic: 172019 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 177583, rend_intergenic: 176640 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 180527, rend_intergenic: 178099 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. GOT 5prime partial gene. -reporting highest scoring path thru the trellis. -found 27 predictions persist after filtering for low support