-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_1437

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 2059, 2261
Sorry, prediction snap_scaffold_1437-snap.1-T1 fails validation.
(ATG)	 GA	572-833	GT	AGG
(CTC)	 AG	1951-2008	GT	AAG
(GGA)	 AG	2059-2261	GT	GGG
-recovered snap_scaffold_1437-snap.1-T1, initial, 572, 833
-recovered snap_scaffold_1437-snap.1-T1, internal, 1951, 2008
-recovered snap_scaffold_1437-snap.1-T1, internal, 2059, 2261

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 886, 1025
Sorry, prediction snap_scaffold_1437-snap.2-T1 fails validation.
(ATG)	 AA	785-862	GT	TGG
(GGG)	 AG	886-1025	GT	GGG
-recovered snap_scaffold_1437-snap.2-T1, initial, 785, 862
-recovered snap_scaffold_1437-snap.2-T1, internal, 886, 1025
Valid prediction for GlimmerHMM_glimmerT_61144-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 2261, rend_intergenic: 1397  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 2421
-exon list size: 10


building trellis

8.3    
16.7    
25.0    
33.3    
41.7    
50.0    
58.3    
66.7    
75.0    
83.3    
91.7    
-found 1 predictions from path traversal
Error with prediction: snap lend_intergenic: 2261, rend_intergenic: 1397  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 1 predictions persist after filtering for low support