-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_1397

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_1397-snap.1-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 2164, 2397
Sorry, prediction Augustus_model.g40482.t1 fails validation.
(ATG)	 AA	1908-1922	GT	AAG
(AGG)	 AG	2029-2044	GT	TGG
(AGG)	 AG	2164-2397	GT	AGG
-recovered Augustus_model.g40482.t1, initial, 1908, 1922
-recovered Augustus_model.g40482.t1, internal, 2029, 2044
-recovered Augustus_model.g40482.t1, internal, 2164, 2397
Couldn't classify 388, 454
Sorry, prediction GlimmerHMM_glimmerT_61129-T1 fails validation.
(CTG)	 AG	388-454	GT	CGG
(AGG)	 AG	2164-2405	AG	AGA
-recovered GlimmerHMM_glimmerT_61129-T1, terminal, 2164, 2405
-recovered GlimmerHMM_glimmerT_61129-T1, internal, 388, 454

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 2500
-exon list size: 9


building trellis

9.1    
18.2    
27.3    
36.4    
45.5    
54.5    
63.6    
72.7    
81.8    
90.9    
-found 1 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 1 predictions persist after filtering for low support