-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_1300

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 379, 637
Sorry, prediction Augustus_model.g40435.t1 fails validation.
(TGA)	 AG	379-637	GT	CGG
(GGG)	 AG	1692-1746	TG	GAT
-recovered Augustus_model.g40435.t1, terminal, 1692, 1746
-recovered Augustus_model.g40435.t1, internal, 379, 637

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GlimmerHMM_glimmerT_61067-T1
Couldn't classify 789, 989
Sorry, prediction snap_scaffold_1300-snap.1-T1 fails validation.
(AGG)	 AG	789-989	GT	ATG
(GCC)	 AG	2281-2393	GC	AGG
-recovered snap_scaffold_1300-snap.1-T1, terminal, 2281, 2393
-recovered snap_scaffold_1300-snap.1-T1, internal, 789, 989
-recovered snap_scaffold_1300-snap.1-T1, internal, 2281, 2393

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 2729
-exon list size: 6


building trellis

12.5    
25.0    
37.5    
50.0    
62.5    
75.0    
87.5    
-found 1 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 1 predictions persist after filtering for low support