-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_13/scaffold_13_8194130-8372472 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for Augustus_model.g21320.t1 Valid prediction for HiQ_model.g21328.t1 Valid prediction for CodingQuarry_transcript_13164-T1 Valid prediction for GlimmerHMM_glimmerT_31981-T1 Valid prediction for CodingQuarry_transcript_13162-T1 Valid prediction for GlimmerHMM_glimmerT_31979-T1 Valid prediction for GlimmerHMM_glimmerT_31990-T1 Valid prediction for snap_scaffold_13-snap.1498-T1 Valid prediction for snap_scaffold_13-snap.1494-T1 Valid prediction for snap_scaffold_13-snap.1490-T1 Valid prediction for snap_scaffold_13-snap.1491-T1 Valid prediction for Augustus_model.g21327.t1 Valid prediction for GlimmerHMM_glimmerT_31991-T1 Valid prediction for GlimmerHMM_glimmerT_31987-T1 Valid prediction for CodingQuarry_transcript_13160-T1 Valid prediction for CodingQuarry_transcript_13166-T1 Valid prediction for snap_scaffold_13-snap.1488-T1 Valid prediction for GlimmerHMM_glimmerT_31984-T1 Valid prediction for HiQ_model.g21324.t1 Valid prediction for snap_scaffold_13-snap.1499-T1 Valid prediction for snap_scaffold_13-snap.1484-T1 Valid prediction for pasa_asmbl_11116.p1 Valid prediction for pasa_asmbl_11132.p1 Valid prediction for Augustus_model.g21318.t1 Valid prediction for snap_scaffold_13-snap.1512-T1 Valid prediction for snap_scaffold_13-snap.1486-T1 Valid prediction for pasa_asmbl_11120.p1 Valid prediction for snap_scaffold_13-snap.1492-T1 Valid prediction for Augustus_model.g21311.t1 Couldn't classify 120790, 120904 Couldn't classify 123199, 123368 Sorry, prediction pasa_asmbl_11665.p1 fails validation. (CAG) AG 120790-120904 GT GGG (GTT) AG 121594-121807 GT GGG (TTG) AG 122050-122243 GT GGG (ACG) AG 122373-122467 GT AGG (ATT) AG 122598-122722 GT AGG (GGC) AG 122808-122897 GT TGG (TCT) AG 122988-123049 GT AGG (TGG) AG 123199-123368 GT AGG -recovered pasa_asmbl_11665.p1, terminal, 122988, 123049 -recovered pasa_asmbl_11665.p1, internal, 120790, 120904 -recovered pasa_asmbl_11665.p1, internal, 121594, 121807 -recovered pasa_asmbl_11665.p1, internal, 122050, 122243 -recovered pasa_asmbl_11665.p1, internal, 122373, 122467 -recovered pasa_asmbl_11665.p1, internal, 122598, 122722 -recovered pasa_asmbl_11665.p1, internal, 122808, 122897 -recovered pasa_asmbl_11665.p1, internal, 122988, 123049 -recovered pasa_asmbl_11665.p1, internal, 123199, 123368 Couldn't classify 93879, 94054 Sorry, prediction pasa_asmbl_11115.p1 fails validation. (TGT) CG 93879-94054 GT AGG (TAA) AG 94133-94277 GT AGG (AGC) AG 94507-94647 GT AGG (GTC) AG 94780-94905 GT AGG (ATC) AG 95099-95209 TC GAT -recovered pasa_asmbl_11115.p1, terminal, 95099, 95209 -recovered pasa_asmbl_11115.p1, internal, 94133, 94277 -recovered pasa_asmbl_11115.p1, internal, 94507, 94647 -recovered pasa_asmbl_11115.p1, internal, 94780, 94905 Valid prediction for snap_scaffold_13-snap.1474-T1 Valid prediction for CodingQuarry_transcript_13159-T1 Valid prediction for GlimmerHMM_glimmerT_31985-T1 Valid prediction for CodingQuarry_transcript_13161-T1 Valid prediction for CodingQuarry_transcript_13163-T1 Valid prediction for Augustus_model.g21325.t1 Valid prediction for CodingQuarry_transcript_13167-T1 Valid prediction for GlimmerHMM_glimmerT_31970-T1 Valid prediction for pasa_asmbl_11114.p1 Valid prediction for snap_scaffold_13-snap.1506-T1 Valid prediction for GlimmerHMM_glimmerT_31976-T1 Valid prediction for HiQ_model.g21322.t1 Valid prediction for pasa_asmbl_11113.p2 Valid prediction for Augustus_model.g21317.t1 Valid prediction for Augustus_model.g21319.t1 Valid prediction for snap_scaffold_13-snap.1483-T1 Valid prediction for snap_scaffold_13-snap.1487-T1 Valid prediction for snap_scaffold_13-snap.1478-T1 Valid prediction for snap_scaffold_13-snap.1476-T1 Valid prediction for GlimmerHMM_glimmerT_31982-T1 Valid prediction for snap_scaffold_13-snap.1501-T1 Valid prediction for snap_scaffold_13-snap.1497-T1 Valid prediction for snap_scaffold_13-snap.1503-T1 Sorry, intron length (9) is less than minimum required (10) Valid prediction for GlimmerHMM_glimmerT_31988-T1 Valid prediction for snap_scaffold_13-snap.1481-T1 Valid prediction for CodingQuarry_transcript_13156-T1 Valid prediction for CodingQuarry_transcript_13157-T1 Valid prediction for GlimmerHMM_glimmerT_31978-T1 Valid prediction for snap_scaffold_13-snap.1472-T1 Valid prediction for GlimmerHMM_glimmerT_31980-T1 Valid prediction for CodingQuarry_transcript_13165-T1 Valid prediction for pasa_asmbl_11124.p2 Valid prediction for snap_scaffold_13-snap.1507-T1 -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Valid prediction for GlimmerHMM_glimmerT_31992-T1 Valid prediction for snap_scaffold_13-snap.1477-T1 Valid prediction for GlimmerHMM_glimmerT_31972-T1 Valid prediction for snap_scaffold_13-snap.1504-T1 Valid prediction for snap_scaffold_13-snap.1493-T1 Valid prediction for Augustus_model.g21323.t1 Valid prediction for GlimmerHMM_glimmerT_31977-T1 Valid prediction for GlimmerHMM_glimmerT_31974-T1 Valid prediction for snap_scaffold_13-snap.1500-T1 Valid prediction for Augustus_model.g21313.t1 Valid prediction for HiQ_model.g21316.t1 Valid prediction for Augustus_model.g21312.t1 Valid prediction for GlimmerHMM_glimmerT_31989-T1 Valid prediction for GlimmerHMM_glimmerT_31971-T1 Couldn't classify 79848, 79949 Sorry, prediction pasa_asmbl_10327.p1 fails validation. (ATT) AG 79848-79949 GT AGG (GGG) AG 80078-80216 GT TGG (GTA) AG 80342-80500 GT AGG (CTC) AG 80622-80712 GT AGG (CCG) AG 80796-81018 AG GAA -recovered pasa_asmbl_10327.p1, terminal, 80796, 81018 -recovered pasa_asmbl_10327.p1, internal, 79848, 79949 -recovered pasa_asmbl_10327.p1, internal, 80078, 80216 -recovered pasa_asmbl_10327.p1, internal, 80342, 80500 -recovered pasa_asmbl_10327.p1, internal, 80622, 80712 Valid prediction for snap_scaffold_13-snap.1511-T1 Valid prediction for snap_scaffold_13-snap.1502-T1 Couldn't classify 165024, 165131 Sorry, prediction pasa_asmbl_9953.p1 fails validation. (ATG) AC 161098-161111 GC CGG (CAG) AG 161199-161247 GT AGG (GAG) AG 161804-161894 GT TTG (GTG) AG 162033-162102 GT GGG (AAT) AG 162207-162277 GT TGG (ATT) AG 162660-162713 GT GAG (AGC) AG 163658-163686 GT TGG (CAG) AG 163901-163926 GT AAG (ACA) AG 164008-164104 GT AGG (TTG) AG 165024-165131 GT AGG -recovered pasa_asmbl_9953.p1, initial, 161098, 161111 -recovered pasa_asmbl_9953.p1, terminal, 163901, 163926 -recovered pasa_asmbl_9953.p1, internal, 161199, 161247 -recovered pasa_asmbl_9953.p1, internal, 161804, 161894 -recovered pasa_asmbl_9953.p1, internal, 162033, 162102 -recovered pasa_asmbl_9953.p1, internal, 162207, 162277 -recovered pasa_asmbl_9953.p1, internal, 162660, 162713 -recovered pasa_asmbl_9953.p1, internal, 163658, 163686 -recovered pasa_asmbl_9953.p1, internal, 163901, 163926 -recovered pasa_asmbl_9953.p1, internal, 164008, 164104 -recovered pasa_asmbl_9953.p1, internal, 165024, 165131 Valid prediction for GlimmerHMM_glimmerT_31973-T1 Valid prediction for CodingQuarry_transcript_13154-T1 Valid prediction for snap_scaffold_13-snap.1485-T1 Couldn't classify 147324, 147341 Sorry, prediction pasa_asmbl_9957.p1 fails validation. (CCC) TT 147324-147341 GT AGG (CTG) AG 148206-148318 GT AGG (GTA) AG 148421-148625 GT GGG (TTT) AG 149291-149440 GT AGG (CGG) AG 149618-149751 GT AGG (TTT) AG 149935-150043 GT GGG (TCA) AG 150197-150331 GC GAG -recovered pasa_asmbl_9957.p1, terminal, 150197, 150331 -recovered pasa_asmbl_9957.p1, internal, 148206, 148318 -recovered pasa_asmbl_9957.p1, internal, 148421, 148625 -recovered pasa_asmbl_9957.p1, internal, 149291, 149440 -recovered pasa_asmbl_9957.p1, internal, 149618, 149751 -recovered pasa_asmbl_9957.p1, internal, 149935, 150043 -recovered pasa_asmbl_9957.p1, internal, 150197, 150331 Couldn't classify 168604, 168779 Couldn't classify 169009, 169107 Sorry, prediction CodingQuarry_transcript_13153-T1 fails validation. (ATG) AG 168319-168397 GT TAG (ACC) AG 168604-168779 AG TAA (GAG) GT 169009-169107 AC GAA -recovered CodingQuarry_transcript_13153-T1, initial, 168319, 168397 -recovered CodingQuarry_transcript_13153-T1, internal, 168319, 168397 Couldn't classify 73716, 73739 Couldn't classify 78672, 78832 Sorry, prediction pasa_asmbl_9963.p1 fails validation. (GTC) AC 73716-73739 GT AGG (GTG) AG 74454-74507 GT AGG (CAT) AG 75504-75649 GT GGG (ACT) AG 76502-76617 GT TGG (ATA) AG 77067-77206 GT AGG (GAG) AG 77331-77477 GT CGG (GCT) AG 77608-77746 GT AGG (AGG) AG 77984-78077 GT GGG (GCG) AG 78196-78280 GT AGG (GCC) AG 78372-78453 GT AGG (CTA) AG 78672-78832 AC GTA -recovered pasa_asmbl_9963.p1, internal, 74454, 74507 -recovered pasa_asmbl_9963.p1, internal, 75504, 75649 -recovered pasa_asmbl_9963.p1, internal, 76502, 76617 -recovered pasa_asmbl_9963.p1, internal, 77067, 77206 -recovered pasa_asmbl_9963.p1, internal, 77331, 77477 -recovered pasa_asmbl_9963.p1, internal, 77608, 77746 -recovered pasa_asmbl_9963.p1, internal, 77984, 78077 -recovered pasa_asmbl_9963.p1, internal, 78196, 78280 -recovered pasa_asmbl_9963.p1, internal, 78372, 78453 Couldn't classify 48806, 48949 Couldn't classify 49089, 49262 Sorry, prediction pasa_asmbl_9964.p1 fails validation. (CAG) GG 48806-48949 GT AGG (GCT) AG 49089-49262 AA AAA Valid prediction for snap_scaffold_13-snap.1473-T1 Valid prediction for snap_scaffold_13-snap.1495-T1 Valid prediction for snap_scaffold_13-snap.1496-T1 Valid prediction for snap_scaffold_13-snap.1510-T1 Valid prediction for pasa_asmbl_9962.p1 Valid prediction for pasa_asmbl_9955.p1 Valid prediction for GlimmerHMM_glimmerT_31975-T1 Valid prediction for snap_scaffold_13-snap.1508-T1 Valid prediction for CodingQuarry_transcript_13158-T1 Valid prediction for Augustus_model.g21315.t1 Valid prediction for snap_scaffold_13-snap.1480-T1 Valid prediction for snap_scaffold_13-snap.1509-T1 Valid prediction for snap_scaffold_13-snap.1489-T1 Valid prediction for snap_scaffold_13-snap.1479-T1 Valid prediction for GlimmerHMM_glimmerT_31986-T1 Valid prediction for pasa_asmbl_9958.p1 Valid prediction for GlimmerHMM_glimmerT_31983-T1 Valid prediction for Augustus_model.g21326.t1 Valid prediction for Augustus_model.g21314.t1 Valid prediction for snap_scaffold_13-snap.1482-T1 Valid prediction for snap_scaffold_13-snap.1505-T1 Valid prediction for snap_scaffold_13-snap.1475-T1 Valid prediction for GlimmerHMM_glimmerT_31993-T1 Valid prediction for CodingQuarry_transcript_13155-T1 Valid prediction for HiQ_model.g21321.t1 -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: snap lend_intergenic: 6213, rend_intergenic: 2682 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 16506, rend_intergenic: 9139 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 21859, rend_intergenic: 21515 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 25316, rend_intergenic: 22272 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 31440, rend_intergenic: 28527 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 34289, rend_intergenic: 31841 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 38255, rend_intergenic: 35170 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 43459, rend_intergenic: 41521 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 69507, rend_intergenic: 62853 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 86776, rend_intergenic: 81948 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 96064, rend_intergenic: 90982 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 103417, rend_intergenic: 98949 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 115779, rend_intergenic: 111442 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 127594, rend_intergenic: 117611 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 135666, rend_intergenic: 129040 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 139938, rend_intergenic: 138616 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 169927, rend_intergenic: 142400 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 177584, rend_intergenic: 170035 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 178343 -exon list size: 567 building trellis 0.2 0.4 0.5 0.7 0.9 1.1 1.2 1.4 1.6 1.8 1.9 2.1 2.3 2.5 2.6 2.8 3.0 3.2 3.3 3.5 3.7 3.9 4.0 4.2 4.4 4.6 4.7 4.9 5.1 5.3 5.4 5.6 5.8 6.0 6.2 6.3 6.5 6.7 6.9 7.0 7.2 7.4 7.6 7.7 7.9 8.1 8.3 8.4 8.6 8.8 9.0 9.1 9.3 9.5 9.7 9.8 10.0 10.2 10.4 10.5 10.7 10.9 11.1 11.2 11.4 11.6 11.8 12.0 12.1 12.3 12.5 12.7 12.8 13.0 13.2 13.4 13.5 13.7 13.9 14.1 14.2 14.4 14.6 14.8 14.9 15.1 15.3 15.5 15.6 15.8 16.0 16.2 16.3 16.5 16.7 16.9 17.0 17.2 17.4 17.6 17.8 17.9 18.1 18.3 18.5 18.6 18.8 19.0 19.2 19.3 19.5 19.7 19.9 20.0 20.2 20.4 20.6 20.7 20.9 21.1 21.3 21.4 21.6 21.8 22.0 22.1 22.3 22.5 22.7 22.8 23.0 23.2 23.4 23.6 23.7 23.9 24.1 24.3 24.4 24.6 24.8 25.0 25.1 25.3 25.5 25.7 25.8 26.0 26.2 26.4 26.5 26.7 26.9 27.1 27.2 27.4 27.6 27.8 27.9 28.1 28.3 28.5 28.6 28.8 29.0 29.2 29.3 29.5 29.7 29.9 30.1 30.2 30.4 30.6 30.8 30.9 31.1 31.3 31.5 31.6 31.8 32.0 32.2 32.3 32.5 32.7 32.9 33.0 33.2 33.4 33.6 33.7 33.9 34.1 34.3 34.4 34.6 34.8 35.0 35.1 35.3 35.5 35.7 35.9 36.0 36.2 36.4 36.6 36.7 36.9 37.1 37.3 37.4 37.6 37.8 38.0 38.1 38.3 38.5 38.7 38.8 39.0 39.2 39.4 39.5 39.7 39.9 40.1 40.2 40.4 40.6 40.8 40.9 41.1 41.3 41.5 41.7 41.8 42.0 42.2 42.4 42.5 42.7 42.9 43.1 43.2 43.4 43.6 43.8 43.9 44.1 44.3 44.5 44.6 44.8 45.0 45.2 45.3 45.5 45.7 45.9 46.0 46.2 46.4 46.6 46.7 46.9 47.1 47.3 47.5 47.6 47.8 48.0 48.2 48.3 48.5 48.7 48.9 49.0 49.2 49.4 49.6 49.7 49.9 50.1 50.3 50.4 50.6 50.8 51.0 51.1 51.3 51.5 51.7 51.8 52.0 52.2 52.4 52.5 52.7 52.9 53.1 53.3 53.4 53.6 53.8 54.0 54.1 54.3 54.5 54.7 54.8 55.0 55.2 55.4 55.5 55.7 55.9 56.1 56.2 56.4 56.6 56.8 56.9 57.1 57.3 57.5 57.6 57.8 58.0 58.2 58.3 58.5 58.7 58.9 59.1 59.2 59.4 59.6 59.8 59.9 60.1 60.3 60.5 60.6 60.8 61.0 61.2 61.3 61.5 61.7 61.9 62.0 62.2 62.4 62.6 62.7 62.9 63.1 63.3 63.4 63.6 63.8 64.0 64.1 64.3 64.5 64.7 64.9 65.0 65.2 65.4 65.6 65.7 65.9 66.1 66.3 66.4 66.6 66.8 67.0 67.1 67.3 67.5 67.7 67.8 68.0 68.2 68.4 68.5 68.7 68.9 69.1 69.2 69.4 69.6 69.8 69.9 70.1 70.3 70.5 70.7 70.8 71.0 71.2 71.4 71.5 71.7 71.9 72.1 72.2 72.4 72.6 72.8 72.9 73.1 73.3 73.5 73.6 73.8 74.0 74.2 74.3 74.5 74.7 74.9 75.0 75.2 75.4 75.6 75.7 75.9 76.1 76.3 76.4 76.6 76.8 77.0 77.2 77.3 77.5 77.7 77.9 78.0 78.2 78.4 78.6 78.7 78.9 79.1 79.3 79.4 79.6 79.8 80.0 80.1 80.3 80.5 80.7 80.8 81.0 81.2 81.4 81.5 81.7 81.9 82.1 82.2 82.4 82.6 82.8 83.0 83.1 83.3 83.5 83.7 83.8 84.0 84.2 84.4 84.5 84.7 84.9 85.1 85.2 85.4 85.6 85.8 85.9 86.1 86.3 86.5 86.6 86.8 87.0 87.2 87.3 87.5 87.7 87.9 88.0 88.2 88.4 88.6 88.8 88.9 89.1 89.3 89.5 89.6 89.8 90.0 90.2 90.3 90.5 90.7 90.9 91.0 91.2 91.4 91.6 91.7 91.9 92.1 92.3 92.4 92.6 92.8 93.0 93.1 93.3 93.5 93.7 93.8 94.0 94.2 94.4 94.6 94.7 94.9 95.1 95.3 95.4 95.6 95.8 96.0 96.1 96.3 96.5 96.7 96.8 97.0 97.2 97.4 97.5 97.7 97.9 98.1 98.2 98.4 98.6 98.8 98.9 99.1 99.3 99.5 99.6 99.8 -found 25 predictions from path traversal Error with prediction: snap lend_intergenic: 6213, rend_intergenic: 2682 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 16506, rend_intergenic: 9139 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 21859, rend_intergenic: 21515 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 25316, rend_intergenic: 22272 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 31440, rend_intergenic: 28527 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 34289, rend_intergenic: 31841 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 38255, rend_intergenic: 35170 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 43459, rend_intergenic: 41521 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 69507, rend_intergenic: 62853 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 86776, rend_intergenic: 81948 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 96064, rend_intergenic: 90982 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 103417, rend_intergenic: 98949 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 115779, rend_intergenic: 111442 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 127594, rend_intergenic: 117611 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 135666, rend_intergenic: 129040 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 139938, rend_intergenic: 138616 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 169927, rend_intergenic: 142400 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 177584, rend_intergenic: 170035 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. GOT 5prime partial gene. -reporting highest scoring path thru the trellis. -found 21 predictions persist after filtering for low support