-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_13/scaffold_13_4462175-4721485

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_13-snap.846-T1
Valid prediction for snap_scaffold_13-snap.844-T1
Valid prediction for snap_scaffold_13-snap.880-T1
Valid prediction for GlimmerHMM_glimmerT_31543-T1
Valid prediction for GlimmerHMM_glimmerT_31549-T1
Valid prediction for GlimmerHMM_glimmerT_31552-T1
Valid prediction for Augustus_model.g20983.t1
Valid prediction for Augustus_model.g21005.t1
Valid prediction for HiQ_model.g20981.t1
Valid prediction for GlimmerHMM_glimmerT_31533-T1
Valid prediction for GlimmerHMM_glimmerT_31540-T1
Valid prediction for GlimmerHMM_glimmerT_31531-T1
Valid prediction for snap_scaffold_13-snap.859-T1
Couldn't classify 54900, 54923
Sorry, prediction pasa_asmbl_10807.p1 fails validation.
(AAT)	 TG	54900-54923	GT	AGG
(GGC)	 AG	55273-55400	GT	TGG
(GTG)	 AG	56447-56561	GT	TGG
(GTC)	 AG	57280-57498	GT	CCG
(TCT)	 AG	57792-57905	GT	AGG
(GTC)	 AG	59127-59198	GT	AGG
(ACA)	 AG	59496-59608	GT	TGG
(GAT)	 AG	60466-60563	GT	GGG
(GCG)	 AG	60681-60847	GT	AGG
(AGT)	 AG	61229-61441	CC	AAC
-recovered pasa_asmbl_10807.p1, terminal, 61229, 61441
-recovered pasa_asmbl_10807.p1, internal, 55273, 55400
-recovered pasa_asmbl_10807.p1, internal, 56447, 56561
-recovered pasa_asmbl_10807.p1, internal, 57280, 57498
-recovered pasa_asmbl_10807.p1, internal, 57792, 57905
-recovered pasa_asmbl_10807.p1, internal, 59127, 59198
-recovered pasa_asmbl_10807.p1, internal, 59496, 59608
-recovered pasa_asmbl_10807.p1, internal, 60466, 60563
-recovered pasa_asmbl_10807.p1, internal, 60681, 60847
Valid prediction for snap_scaffold_13-snap.863-T1
Valid prediction for Augustus_model.g20980.t1
Valid prediction for snap_scaffold_13-snap.874-T1
Valid prediction for GlimmerHMM_glimmerT_31538-T1
Valid prediction for pasa_asmbl_10819.p1
Valid prediction for snap_scaffold_13-snap.862-T1
Valid prediction for CodingQuarry_transcript_13013-T1
Valid prediction for snap_scaffold_13-snap.870-T1
Valid prediction for Augustus_model.g21004.t1
Valid prediction for snap_scaffold_13-snap.847-T1
Valid prediction for Augustus_model.g20999.t1
Valid prediction for Augustus_model.g20988.t1
Valid prediction for CodingQuarry_transcript_13010-T1
Valid prediction for HiQ_model.g20982.t1
Valid prediction for GlimmerHMM_glimmerT_31562-T1
Valid prediction for GlimmerHMM_glimmerT_31536-T1
Valid prediction for GlimmerHMM_glimmerT_31550-T1
Valid prediction for snap_scaffold_13-snap.882-T1
Valid prediction for pasa_asmbl_10815.p1
Valid prediction for snap_scaffold_13-snap.857-T1
Valid prediction for GlimmerHMM_glimmerT_31560-T1
Valid prediction for GlimmerHMM_glimmerT_31568-T1
Valid prediction for GlimmerHMM_glimmerT_31532-T1
Couldn't classify 152204, 152539
Sorry, prediction pasa_asmbl_9654.p2 fails validation.
(CCT)	 TT	152204-152539	TG	AAT
Valid prediction for snap_scaffold_13-snap.865-T1
Valid prediction for GlimmerHMM_glimmerT_31546-T1
Valid prediction for GlimmerHMM_glimmerT_31570-T1
Valid prediction for Augustus_model.g20985.t1
Valid prediction for Augustus_model.g20996.t1
Valid prediction for snap_scaffold_13-snap.850-T1
Valid prediction for GlimmerHMM_glimmerT_31529-T1
Valid prediction for Augustus_model.g20986.t1
Valid prediction for snap_scaffold_13-snap.884-T1
Couldn't classify 43745, 43813
Sorry, prediction pasa_asmbl_10805.p1 fails validation.
(AAA)	 GC	43745-43813	GT	AGG
(CAC)	 AG	43971-44163	GT	GGG
(ATC)	 AG	44314-44442	GT	GGG
(AGT)	 AG	44577-44682	GT	AGG
(AGT)	 AG	45430-45561	GT	TTG
(GTG)	 AG	45827-45950	GT	CGG
(ATC)	 AG	46176-46264	GT	AAG
(AGA)	 AG	46542-46666	GT	AGG
(GAG)	 AG	46981-47267	TG	AAT
-recovered pasa_asmbl_10805.p1, terminal, 46981, 47267
-recovered pasa_asmbl_10805.p1, internal, 43971, 44163
-recovered pasa_asmbl_10805.p1, internal, 44314, 44442
-recovered pasa_asmbl_10805.p1, internal, 44577, 44682
-recovered pasa_asmbl_10805.p1, internal, 45430, 45561
-recovered pasa_asmbl_10805.p1, internal, 45827, 45950
-recovered pasa_asmbl_10805.p1, internal, 46176, 46264
-recovered pasa_asmbl_10805.p1, internal, 46542, 46666
Couldn't classify 88279, 88526
Sorry, prediction pasa_asmbl_10812.p1 fails validation.
(CTG)	 GC	88279-88526	GT	TCG
(GCT)	 AG	91315-91454	GT	AAG
(ACA)	 AG	91780-91924	GT	GGG
(TAA)	 AG	92132-92346	GT	GTG
(GTG)	 AG	92692-92818	GT	TCG
(GCC)	 AG	93246-93496	GT	AAG
(AGC)	 AG	94457-94624	GT	GGG
(GGA)	 AG	95168-95366	GT	AAG
(AAC)	 AG	95843-96132	GT	GGG
(ACA)	 AG	96335-96474	GT	AGG
(GAG)	 AG	97140-97299	GT	CCG
(GAG)	 AG	97559-97661	GT	AAG
(GCA)	 AG	97778-97845	GT	CGG
(TGT)	 AG	98142-98371	GT	TGG
(GTG)	 AG	98839-98949	GT	AGG
(AAC)	 AG	99142-99301	GT	AGG
(ACT)	 AG	99456-99585	GT	TGG
(GTC)	 AG	100045-100179	GT	CTG
(ACA)	 AG	100556-100916	CA	AAC
-recovered pasa_asmbl_10812.p1, terminal, 100556, 100916
-recovered pasa_asmbl_10812.p1, internal, 91315, 91454
-recovered pasa_asmbl_10812.p1, internal, 91780, 91924
-recovered pasa_asmbl_10812.p1, internal, 92132, 92346
-recovered pasa_asmbl_10812.p1, internal, 92692, 92818
-recovered pasa_asmbl_10812.p1, internal, 93246, 93496
-recovered pasa_asmbl_10812.p1, internal, 94457, 94624
-recovered pasa_asmbl_10812.p1, internal, 95168, 95366
-recovered pasa_asmbl_10812.p1, internal, 95843, 96132
-recovered pasa_asmbl_10812.p1, internal, 96335, 96474
-recovered pasa_asmbl_10812.p1, internal, 97140, 97299
-recovered pasa_asmbl_10812.p1, internal, 97559, 97661
-recovered pasa_asmbl_10812.p1, internal, 97778, 97845
-recovered pasa_asmbl_10812.p1, internal, 98142, 98371
-recovered pasa_asmbl_10812.p1, internal, 98839, 98949
-recovered pasa_asmbl_10812.p1, internal, 99142, 99301
-recovered pasa_asmbl_10812.p1, internal, 99456, 99585
-recovered pasa_asmbl_10812.p1, internal, 100045, 100179
Valid prediction for snap_scaffold_13-snap.845-T1
Valid prediction for GlimmerHMM_glimmerT_31557-T1
Valid prediction for snap_scaffold_13-snap.848-T1
Valid prediction for snap_scaffold_13-snap.851-T1
Couldn't classify 39349, 39410
Couldn't classify 43309, 43335
Sorry, prediction pasa_asmbl_10803.p1 fails validation.
(TCG)	 AC	39349-39410	GT	AAG
(GAA)	 AG	39566-39647	GT	AGG
(CCA)	 AG	41186-41271	GT	AAG
(AAC)	 AG	41536-41636	GT	AGG
(TCA)	 AG	42206-42387	GT	AGG
(GTG)	 AG	42761-42868	GT	CCG
(AAG)	 AG	43019-43192	GT	AGG
(GCC)	 AG	43309-43335	AA	GGA
-recovered pasa_asmbl_10803.p1, internal, 39566, 39647
-recovered pasa_asmbl_10803.p1, internal, 41186, 41271
-recovered pasa_asmbl_10803.p1, internal, 41536, 41636
-recovered pasa_asmbl_10803.p1, internal, 42206, 42387
-recovered pasa_asmbl_10803.p1, internal, 42761, 42868
-recovered pasa_asmbl_10803.p1, internal, 43019, 43192
Valid prediction for GlimmerHMM_glimmerT_31572-T1
Couldn't classify 189673, 189787
Sorry, prediction pasa_asmbl_11680.p1 fails validation.
(ATG)	 TC	184053-184116	GT	AAG
(AGA)	 AG	186466-186659	GT	AAG
(GTG)	 AG	187705-187818	GT	TGG
(GAC)	 AG	189286-189446	GT	AGG
(GGG)	 AG	189673-189787	GT	AGG
-recovered pasa_asmbl_11680.p1, initial, 184053, 184116
-recovered pasa_asmbl_11680.p1, internal, 186466, 186659
-recovered pasa_asmbl_11680.p1, internal, 187705, 187818
-recovered pasa_asmbl_11680.p1, internal, 189286, 189446
-recovered pasa_asmbl_11680.p1, internal, 189673, 189787
Valid prediction for Augustus_model.g20978.t1
Couldn't classify 38669, 38799
Couldn't classify 38928, 39225
Sorry, prediction pasa_asmbl_10802.p2 fails validation.
(AAG)	 TA	38669-38799	GT	AGG
(TCA)	 AG	38928-39225	GA	TGG
Valid prediction for HiQ_model.g20991.t1
Valid prediction for snap_scaffold_13-snap.878-T1
Valid prediction for CodingQuarry_transcript_13011-T1
Valid prediction for pasa_asmbl_10817.p1
Valid prediction for GlimmerHMM_glimmerT_31547-T1
Valid prediction for GlimmerHMM_glimmerT_31555-T1
Valid prediction for snap_scaffold_13-snap.843-T1
Valid prediction for Augustus_model.g20997.t1
Valid prediction for GlimmerHMM_glimmerT_31542-T1
Valid prediction for GlimmerHMM_glimmerT_31563-T1
Valid prediction for HiQ_model.g20990.t1
Valid prediction for GlimmerHMM_glimmerT_31544-T1
Valid prediction for snap_scaffold_13-snap.855-T1
Valid prediction for GlimmerHMM_glimmerT_31535-T1
Valid prediction for GlimmerHMM_glimmerT_31534-T1
Valid prediction for snap_scaffold_13-snap.867-T1
Valid prediction for snap_scaffold_13-snap.871-T1
Valid prediction for snap_scaffold_13-snap.854-T1
Valid prediction for CodingQuarry_transcript_13014-T1
Valid prediction for GlimmerHMM_glimmerT_31541-T1
Couldn't classify 76694, 77194
Sorry, prediction pasa_asmbl_10811.p2 fails validation.
(CTG)	 CG	76694-77194	GG	GGG

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for Augustus_model.g21002.t1
Valid prediction for CodingQuarry_transcript_13009-T1
Valid prediction for GlimmerHMM_glimmerT_31539-T1
Valid prediction for Augustus_model.g20994.t1
Valid prediction for snap_scaffold_13-snap.877-T1
Valid prediction for pasa_asmbl_9635.p1
Valid prediction for Augustus_model.g20987.t1
Valid prediction for Augustus_model.g20998.t1
Valid prediction for snap_scaffold_13-snap.868-T1
Valid prediction for Augustus_model.g21003.t1
Valid prediction for GlimmerHMM_glimmerT_31566-T1
Valid prediction for GlimmerHMM_glimmerT_31569-T1
Valid prediction for snap_scaffold_13-snap.879-T1
Valid prediction for snap_scaffold_13-snap.885-T1
Couldn't classify 43111, 43500
Sorry, prediction pasa_asmbl_9663.p1 fails validation.
(ACA)	 AC	43111-43500	AT	GAA
Valid prediction for snap_scaffold_13-snap.873-T1
Valid prediction for Augustus_model.g21000.t1
Valid prediction for GlimmerHMM_glimmerT_31556-T1
Couldn't classify 41768, 41840
Couldn't classify 42561, 42684
Sorry, prediction pasa_asmbl_9664.p1 fails validation.
(TGG)	 TT	41768-41840	GT	GGG
(GAG)	 AG	42061-42252	GT	CGG
(ACC)	 AG	42350-42464	GT	AGG
(TGA)	 AG	42561-42684	GT	AGG
-recovered pasa_asmbl_9664.p1, internal, 42061, 42252
-recovered pasa_asmbl_9664.p1, internal, 42350, 42464
-recovered pasa_asmbl_9664.p1, internal, 42561, 42684
Valid prediction for GlimmerHMM_glimmerT_31553-T1
Valid prediction for snap_scaffold_13-snap.875-T1
Valid prediction for snap_scaffold_13-snap.872-T1
Valid prediction for GlimmerHMM_glimmerT_31537-T1
Valid prediction for GlimmerHMM_glimmerT_31558-T1
Valid prediction for GlimmerHMM_glimmerT_31559-T1
Valid prediction for HiQ_model.g20989.t1
Couldn't classify 132204, 132311
Sorry, prediction pasa_asmbl_9637.p1 fails validation.
(TGG)	 GG	132204-132311	GT	AGG
(GTC)	 AG	132922-133038	GT	CAG
(TCC)	 AG	133195-133377	GT	TGG
(ACC)	 AG	133763-133852	GT	AGG
(ACG)	 AG	134311-134450	GT	AAG
(ACG)	 AG	135288-135430	GT	AGG
(TGT)	 AG	135605-135701	GT	AGG
(GAT)	 AG	135809-135925	GT	CAG
(GTG)	 AG	136388-136469	GT	AGG
(GCC)	 AG	136825-136899	GT	AGG
(AGT)	 AG	137004-137066	GT	AGG
(CTT)	 AG	137510-137609	GT	AGG
(GTC)	 AG	137941-138018	GT	CGG
(GGT)	 AG	138275-138435	GT	TGG
(CCT)	 AG	139484-139672	GG	AAG
add_exon() Sorry, pasa_asmbl_9637.p1 135288-135430-terminal-2 is invalid.
-recovered pasa_asmbl_9637.p1, terminal, 135288, 135430
-recovered pasa_asmbl_9637.p1, terminal, 139484, 139672
-recovered pasa_asmbl_9637.p1, internal, 132922, 133038
-recovered pasa_asmbl_9637.p1, internal, 133195, 133377
-recovered pasa_asmbl_9637.p1, internal, 133763, 133852
-recovered pasa_asmbl_9637.p1, internal, 134311, 134450
-recovered pasa_asmbl_9637.p1, internal, 135288, 135430
-recovered pasa_asmbl_9637.p1, internal, 135605, 135701
-recovered pasa_asmbl_9637.p1, internal, 135809, 135925
-recovered pasa_asmbl_9637.p1, internal, 136388, 136469
-recovered pasa_asmbl_9637.p1, internal, 136825, 136899
-recovered pasa_asmbl_9637.p1, internal, 137004, 137066
-recovered pasa_asmbl_9637.p1, internal, 137510, 137609
-recovered pasa_asmbl_9637.p1, internal, 137941, 138018
-recovered pasa_asmbl_9637.p1, internal, 138275, 138435
Couldn't classify 112022, 112192
Sorry, prediction pasa_asmbl_9650.p1 fails validation.
(GGT)	 AG	112022-112192	GT	TGG
(CCC)	 AG	112636-112842	GT	AGG
(GTG)	 AG	113089-113328	GT	TGG
(ACT)	 AG	114784-114837	GT	TGG
(GGC)	 AG	116400-116559	GT	AGG
(TTC)	 AG	118682-118773	GT	AGG
(TTG)	 AG	119236-119262	GT	TGG
(ATT)	 AG	120045-120101	TT	AGT
-recovered pasa_asmbl_9650.p1, terminal, 120045, 120101
-recovered pasa_asmbl_9650.p1, internal, 112022, 112192
-recovered pasa_asmbl_9650.p1, internal, 112636, 112842
-recovered pasa_asmbl_9650.p1, internal, 113089, 113328
-recovered pasa_asmbl_9650.p1, internal, 114784, 114837
-recovered pasa_asmbl_9650.p1, internal, 116400, 116559
-recovered pasa_asmbl_9650.p1, internal, 118682, 118773
-recovered pasa_asmbl_9650.p1, internal, 119236, 119262
Valid prediction for GlimmerHMM_glimmerT_31551-T1
Valid prediction for pasa_asmbl_9648.p1
Valid prediction for Augustus_model.g20995.t1
Valid prediction for Augustus_model.g20984.t1
Valid prediction for GlimmerHMM_glimmerT_31530-T1
Valid prediction for Augustus_model.g20992.t1
Valid prediction for snap_scaffold_13-snap.860-T1
Valid prediction for HiQ_model.g20979.t1
Valid prediction for snap_scaffold_13-snap.883-T1
Valid prediction for snap_scaffold_13-snap.876-T1
Valid prediction for snap_scaffold_13-snap.864-T1
Valid prediction for GlimmerHMM_glimmerT_31548-T1
Valid prediction for snap_scaffold_13-snap.856-T1
Valid prediction for snap_scaffold_13-snap.881-T1
Valid prediction for GlimmerHMM_glimmerT_31554-T1
Valid prediction for snap_scaffold_13-snap.869-T1
Couldn't classify 63290, 63379
Sorry, prediction pasa_asmbl_9661.p1 fails validation.
(ATG)	 CA	61256-61311	GT	AGG
(GAG)	 AG	61889-62022	GT	AGG
(GAG)	 AG	62151-62233	GT	CGG
(GAA)	 AG	62328-62423	GT	TGG
(ATC)	 AG	62578-62659	GT	GGG
(GTG)	 AG	62851-62912	GT	TGG
(ATC)	 AG	63016-63120	GT	AGG
(AGA)	 AG	63290-63379	GG	CAG
-recovered pasa_asmbl_9661.p1, initial, 61256, 61311
-recovered pasa_asmbl_9661.p1, internal, 61889, 62022
-recovered pasa_asmbl_9661.p1, internal, 62151, 62233
-recovered pasa_asmbl_9661.p1, internal, 62328, 62423
-recovered pasa_asmbl_9661.p1, internal, 62578, 62659
-recovered pasa_asmbl_9661.p1, internal, 62851, 62912
-recovered pasa_asmbl_9661.p1, internal, 63016, 63120
Valid prediction for GlimmerHMM_glimmerT_31567-T1
Valid prediction for snap_scaffold_13-snap.866-T1
Valid prediction for snap_scaffold_13-snap.861-T1
Valid prediction for GlimmerHMM_glimmerT_31571-T1
Valid prediction for snap_scaffold_13-snap.858-T1
Valid prediction for Augustus_model.g20993.t1
Valid prediction for Augustus_model.g21001.t1
Valid prediction for CodingQuarry_transcript_13012-T1
Valid prediction for GlimmerHMM_glimmerT_31565-T1
Valid prediction for snap_scaffold_13-snap.852-T1
Valid prediction for GlimmerHMM_glimmerT_31545-T1
Valid prediction for snap_scaffold_13-snap.849-T1
Valid prediction for snap_scaffold_13-snap.853-T1
Valid prediction for GlimmerHMM_glimmerT_31564-T1
Valid prediction for GlimmerHMM_glimmerT_31561-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 40272, rend_intergenic: 32994  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 61441, rend_intergenic: 60200  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 100916, rend_intergenic: 98365  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 143393, rend_intergenic: 142045  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 160482, rend_intergenic: 145872  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 170716, rend_intergenic: 163635  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 194312, rend_intergenic: 186392  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 201796, rend_intergenic: 200938  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 212830, rend_intergenic: 209258  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 223355, rend_intergenic: 215818  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 244810, rend_intergenic: 243382  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 256576, rend_intergenic: 250885  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 259311
-exon list size: 600


building trellis

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22.3    
22.4    
22.6    
22.8    
22.9    
23.1    
23.3    
23.4    
23.6    
23.8    
23.9    
24.1    
24.3    
24.4    
24.6    
24.8    
24.9    
25.1    
25.2    
25.4    
25.6    
25.7    
25.9    
26.1    
26.2    
26.4    
26.6    
26.7    
26.9    
27.1    
27.2    
27.4    
27.6    
27.7    
27.9    
28.1    
28.2    
28.4    
28.6    
28.7    
28.9    
29.1    
29.2    
29.4    
29.6    
29.7    
29.9    
30.1    
30.2    
30.4    
30.6    
30.7    
30.9    
31.1    
31.2    
31.4    
31.6    
31.7    
31.9    
32.1    
32.2    
32.4    
32.6    
32.7    
32.9    
33.1    
33.2    
33.4    
33.6    
33.7    
33.9    
34.1    
34.2    
34.4    
34.6    
34.7    
34.9    
35.0    
35.2    
35.4    
35.5    
35.7    
35.9    
36.0    
36.2    
36.4    
36.5    
36.7    
36.9    
37.0    
37.2    
37.4    
37.5    
37.7    
37.9    
38.0    
38.2    
38.4    
38.5    
38.7    
38.9    
39.0    
39.2    
39.4    
39.5    
39.7    
39.9    
40.0    
40.2    
40.4    
40.5    
40.7    
40.9    
41.0    
41.2    
41.4    
41.5    
41.7    
41.9    
42.0    
42.2    
42.4    
42.5    
42.7    
42.9    
43.0    
43.2    
43.4    
43.5    
43.7    
43.9    
44.0    
44.2    
44.4    
44.5    
44.7    
44.9    
45.0    
45.2    
45.3    
45.5    
45.7    
45.8    
46.0    
46.2    
46.3    
46.5    
46.7    
46.8    
47.0    
47.2    
47.3    
47.5    
47.7    
47.8    
48.0    
48.2    
48.3    
48.5    
48.7    
48.8    
49.0    
49.2    
49.3    
49.5    
49.7    
49.8    
50.0    
50.2    
50.3    
50.5    
50.7    
50.8    
51.0    
51.2    
51.3    
51.5    
51.7    
51.8    
52.0    
52.2    
52.3    
52.5    
52.7    
52.8    
53.0    
53.2    
53.3    
53.5    
53.7    
53.8    
54.0    
54.2    
54.3    
54.5    
54.7    
54.8    
55.0    
55.1    
55.3    
55.5    
55.6    
55.8    
56.0    
56.1    
56.3    
56.5    
56.6    
56.8    
57.0    
57.1    
57.3    
57.5    
57.6    
57.8    
58.0    
58.1    
58.3    
58.5    
58.6    
58.8    
59.0    
59.1    
59.3    
59.5    
59.6    
59.8    
60.0    
60.1    
60.3    
60.5    
60.6    
60.8    
61.0    
61.1    
61.3    
61.5    
61.6    
61.8    
62.0    
62.1    
62.3    
62.5    
62.6    
62.8    
63.0    
63.1    
63.3    
63.5    
63.6    
63.8    
64.0    
64.1    
64.3    
64.5    
64.6    
64.8    
65.0    
65.1    
65.3    
65.4    
65.6    
65.8    
65.9    
66.1    
66.3    
66.4    
66.6    
66.8    
66.9    
67.1    
67.3    
67.4    
67.6    
67.8    
67.9    
68.1    
68.3    
68.4    
68.6    
68.8    
68.9    
69.1    
69.3    
69.4    
69.6    
69.8    
69.9    
70.1    
70.3    
70.4    
70.6    
70.8    
70.9    
71.1    
71.3    
71.4    
71.6    
71.8    
71.9    
72.1    
72.3    
72.4    
72.6    
72.8    
72.9    
73.1    
73.3    
73.4    
73.6    
73.8    
73.9    
74.1    
74.3    
74.4    
74.6    
74.8    
74.9    
75.1    
75.2    
75.4    
75.6    
75.7    
75.9    
76.1    
76.2    
76.4    
76.6    
76.7    
76.9    
77.1    
77.2    
77.4    
77.6    
77.7    
77.9    
78.1    
78.2    
78.4    
78.6    
78.7    
78.9    
79.1    
79.2    
79.4    
79.6    
79.7    
79.9    
80.1    
80.2    
80.4    
80.6    
80.7    
80.9    
81.1    
81.2    
81.4    
81.6    
81.7    
81.9    
82.1    
82.2    
82.4    
82.6    
82.7    
82.9    
83.1    
83.2    
83.4    
83.6    
83.7    
83.9    
84.1    
84.2    
84.4    
84.6    
84.7    
84.9    
85.0    
85.2    
85.4    
85.5    
85.7    
85.9    
86.0    
86.2    
86.4    
86.5    
86.7    
86.9    
87.0    
87.2    
87.4    
87.5    
87.7    
87.9    
88.0    
88.2    
88.4    
88.5    
88.7    
88.9    
89.0    
89.2    
89.4    
89.5    
89.7    
89.9    
90.0    
90.2    
90.4    
90.5    
90.7    
90.9    
91.0    
91.2    
91.4    
91.5    
91.7    
91.9    
92.0    
92.2    
92.4    
92.5    
92.7    
92.9    
93.0    
93.2    
93.4    
93.5    
93.7    
93.9    
94.0    
94.2    
94.4    
94.5    
94.7    
94.9    
95.0    
95.2    
95.3    
95.5    
95.7    
95.8    
96.0    
96.2    
96.3    
96.5    
96.7    
96.8    
97.0    
97.2    
97.3    
97.5    
97.7    
97.8    
98.0    
98.2    
98.3    
98.5    
98.7    
98.8    
99.0    
99.2    
99.3    
99.5    
99.7    
99.8    
-found 38 predictions from path traversal
Error with prediction: snap lend_intergenic: 40272, rend_intergenic: 32994  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 61441, rend_intergenic: 60200  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 100916, rend_intergenic: 98365  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 143393, rend_intergenic: 142045  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 160482, rend_intergenic: 145872  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 170716, rend_intergenic: 163635  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 194312, rend_intergenic: 186392  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 201796, rend_intergenic: 200938  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 212830, rend_intergenic: 209258  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 223355, rend_intergenic: 215818  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 244810, rend_intergenic: 243382  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 256576, rend_intergenic: 250885  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 30 predictions persist after filtering for low support