-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_1291

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 32, 237
Sorry, prediction snap_scaffold_1291-snap.1-T1 fails validation.
(AGA)	 AG	32-237	GT	AAG
(ATG)	 AG	1484-1612	GT	AGG
(GCC)	 AG	2110-2180	GG	AGG
add_exon() Sorry, snap_scaffold_1291-snap.1-T1 1484-1612-initial-1 is invalid.
-recovered snap_scaffold_1291-snap.1-T1, initial, 1484, 1612
-recovered snap_scaffold_1291-snap.1-T1, terminal, 2110, 2180
-recovered snap_scaffold_1291-snap.1-T1, internal, 32, 237
-recovered snap_scaffold_1291-snap.1-T1, internal, 1484, 1612

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 1659, 1881
Sorry, prediction snap_scaffold_1291-snap.2-T1 fails validation.
(ATG)	 AC	633-656	GT	GGG
(GCT)	 AG	1356-1582	GT	CCG
(CGC)	 AG	1659-1881	GT	ATG
-recovered snap_scaffold_1291-snap.2-T1, initial, 633, 656
-recovered snap_scaffold_1291-snap.2-T1, internal, 1356, 1582
-recovered snap_scaffold_1291-snap.2-T1, internal, 1659, 1881

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 2180, rend_intergenic: 868  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 2748
-exon list size: 9


building trellis

9.1    
18.2    
27.3    
36.4    
45.5    
54.5    
63.6    
72.7    
81.8    
90.9    
-found 1 predictions from path traversal
Error with prediction: snap lend_intergenic: 2180, rend_intergenic: 868  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support