-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_1274

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)
-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 1887, 2060
Sorry, prediction snap_scaffold_1274-snap.1-T1 fails validation.
(ATG)	 AA	1451-1487	GT	TAG
(AGC)	 AG	1887-2060	GT	GGG
-recovered snap_scaffold_1274-snap.1-T1, initial, 1451, 1487
-recovered snap_scaffold_1274-snap.1-T1, internal, 1887, 2060
Valid prediction for GlimmerHMM_glimmerT_61055-T1
Couldn't classify 2751, 2806
Sorry, prediction Augustus_model.g40426.t1 fails validation.
(ATG)	 GA	1074-1094	GT	AAG
(GGG)	 AG	1898-2060	GT	GGG
(ACC)	 AG	2751-2806		GT
-recovered Augustus_model.g40426.t1, initial, 1074, 1094
-recovered Augustus_model.g40426.t1, internal, 1898, 2060

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 2806
-exon list size: 6


building trellis

12.5    
25.0    
37.5    
50.0    
62.5    
75.0    
87.5    
-found 1 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 1 predictions persist after filtering for low support