-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_1224

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 197, 257
Sorry, prediction snap_scaffold_1224-snap.2-T1 fails validation.
(TAA)	 AG	197-257	GT	AGG
(TTG)	 AG	1998-2546	AG	AAA
-recovered snap_scaffold_1224-snap.2-T1, terminal, 1998, 2546
-recovered snap_scaffold_1224-snap.2-T1, internal, 197, 257

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 2744, 2929
Sorry, prediction snap_scaffold_1224-snap.1-T1 fails validation.
(AGG)	 AG	2744-2929	GT	AGG
-recovered snap_scaffold_1224-snap.1-T1, internal, 2744, 2929

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 2933
-exon list size: 3


building trellis

20.0    
40.0    
60.0    
80.0    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support