-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_1223

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GlimmerHMM_glimmerT_61030-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 1631, 1668
Couldn't classify 2528, 2586
Sorry, prediction snap_scaffold_1223-snap.1-T1 fails validation.
(CCG)	 AG	1631-1668	GT	CCG
(CCG)	 AG	1674-1766	GT	AGG
(GAG)	 AG	2528-2586	GT	AGG
-recovered snap_scaffold_1223-snap.1-T1, internal, 1631, 1668
-recovered snap_scaffold_1223-snap.1-T1, internal, 1674, 1766
-recovered snap_scaffold_1223-snap.1-T1, internal, 2528, 2586
Sorry, intron length (4) is less than minimum required (10)

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 2937
-exon list size: 7


building trellis

11.1    
22.2    
33.3    
44.4    
55.6    
66.7    
77.8    
88.9    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support