-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_1200

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 241, 350
Sorry, prediction snap_scaffold_1200-snap.1-T1 fails validation.
(GAT)	 AG	241-350	GT	GGG
(GTG)	 AG	1211-1313	GT	AGG
add_exon() Sorry, snap_scaffold_1200-snap.1-T1 1211-1313-terminal-3 is invalid.
-recovered snap_scaffold_1200-snap.1-T1, terminal, 1211, 1313
-recovered snap_scaffold_1200-snap.1-T1, internal, 241, 350
-recovered snap_scaffold_1200-snap.1-T1, internal, 1211, 1313
Valid prediction for GlimmerHMM_glimmerT_61021-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)
-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 3000
-exon list size: 6


building trellis

12.5    
25.0    
37.5    
50.0    
62.5    
75.0    
87.5    
-found 1 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 1 predictions persist after filtering for low support