-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_12/scaffold_12_10358968-10579622 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for GlimmerHMM_glimmerT_29960-T1 Valid prediction for Augustus_model.g19834.t1 Valid prediction for CodingQuarry_transcript_10376-T1 Valid prediction for snap_scaffold_12-snap.1980-T1 Valid prediction for GlimmerHMM_glimmerT_29965-T1 Valid prediction for snap_scaffold_12-snap.1992-T1 Valid prediction for GlimmerHMM_glimmerT_29982-T1 Valid prediction for pasa_asmbl_7921.p1 Valid prediction for Augustus_model.g19832.t1 Valid prediction for HiQ_model.g19835.t1 Valid prediction for snap_scaffold_12-snap.1963-T1 Valid prediction for GlimmerHMM_glimmerT_29983-T1 Valid prediction for snap_scaffold_12-snap.1988-T1 Valid prediction for pasa_asmbl_7925.p1 Valid prediction for GlimmerHMM_glimmerT_29981-T1 Valid prediction for snap_scaffold_12-snap.1969-T1 Couldn't classify 195017, 195283 Couldn't classify 195829, 195996 Sorry, prediction CodingQuarry_transcript_10372-T1 fails validation. (ATG) AC 195017-195283 NN NNN (ACC) CC 195829-195996 GT GAG (AAA) AG 196152-196271 GT ATG (GAG) AG 196393-196447 GT TGG (GCG) AG 196554-196724 GT AGG (CCC) AG 197088-197227 AG AAA -recovered CodingQuarry_transcript_10372-T1, terminal, 197088, 197227 -recovered CodingQuarry_transcript_10372-T1, internal, 196152, 196271 -recovered CodingQuarry_transcript_10372-T1, internal, 196393, 196447 -recovered CodingQuarry_transcript_10372-T1, internal, 196554, 196724 Valid prediction for snap_scaffold_12-snap.1986-T1 Valid prediction for snap_scaffold_12-snap.1971-T1 Couldn't classify 5, 80 Couldn't classify 918, 1109 Sorry, prediction pasa_asmbl_7919.p1 fails validation. (GAG) CT 5-80 GT AGG (ACT) AG 489-697 GT AGG (TTG) AG 918-1109 GA CGG -recovered pasa_asmbl_7919.p1, internal, 489, 697 Valid prediction for HiQ_model.g19837.t1 Valid prediction for snap_scaffold_12-snap.1996-T1 Couldn't classify 186648, 186713 Couldn't classify 186928, 187031 Couldn't classify 187167, 187236 Sorry, prediction pasa_asmbl_7932.p1 fails validation. (AAG) TA 186648-186713 GT AGG (GCT) AG 186928-187031 AT GAA (GGA) AC 187167-187236 GT TGG (ATC) AG 187362-187435 GT TGG (GGA) AG 187557-187719 GT AGG (ATT) AG 188020-188109 GT AGG (GTA) AG 188637-188719 GT CAG (GAA) AG 188805-188872 GT AGG (GTT) AG 189035-189153 GT AGG (GCC) AG 189276-189468 GT AGG (CAA) AG 189627-189731 GT TGG (GTA) AG 189830-189940 GT TGG (AAT) AG 190021-190106 GT AGG (TAT) AG 190234-190341 GT AGG (ATG) AG 190446-190559 GT AGG (GGA) AG 190680-190785 GT TGG (AGG) AG 191089-191261 GT CGG (GTG) AG 191343-191495 GT AGG (CCT) AG 191729-191824 AA AAA -recovered pasa_asmbl_7932.p1, initial, 190446, 190559 add_exon() Sorry, pasa_asmbl_7932.p1 189276-189468-terminal-3 is invalid. -recovered pasa_asmbl_7932.p1, terminal, 189276, 189468 -recovered pasa_asmbl_7932.p1, terminal, 191729, 191824 -recovered pasa_asmbl_7932.p1, internal, 187362, 187435 -recovered pasa_asmbl_7932.p1, internal, 187557, 187719 -recovered pasa_asmbl_7932.p1, internal, 188020, 188109 -recovered pasa_asmbl_7932.p1, internal, 188637, 188719 -recovered pasa_asmbl_7932.p1, internal, 188805, 188872 -recovered pasa_asmbl_7932.p1, internal, 189035, 189153 -recovered pasa_asmbl_7932.p1, internal, 189276, 189468 -recovered pasa_asmbl_7932.p1, internal, 189627, 189731 -recovered pasa_asmbl_7932.p1, internal, 189830, 189940 -recovered pasa_asmbl_7932.p1, internal, 190021, 190106 -recovered pasa_asmbl_7932.p1, internal, 190234, 190341 -recovered pasa_asmbl_7932.p1, internal, 190446, 190559 -recovered pasa_asmbl_7932.p1, internal, 190680, 190785 -recovered pasa_asmbl_7932.p1, internal, 191089, 191261 -recovered pasa_asmbl_7932.p1, internal, 191343, 191495 Valid prediction for CodingQuarry_transcript_10371-T1 Valid prediction for snap_scaffold_12-snap.1965-T1 Valid prediction for snap_scaffold_12-snap.1989-T1 Valid prediction for snap_scaffold_12-snap.1990-T1 Valid prediction for snap_scaffold_12-snap.1982-T1 Valid prediction for GlimmerHMM_glimmerT_29957-T1 Valid prediction for GlimmerHMM_glimmerT_29980-T1 Valid prediction for GlimmerHMM_glimmerT_29984-T1 Couldn't classify 216971, 217139 Sorry, prediction CodingQuarry_transcript_10377-T1 fails validation. (ATG) TA 213487-213597 GT TAG (CTG) AG 214236-214298 GT TGG (CTG) AG 215543-215632 GT TAG (GAT) AG 215922-215987 GT ATG (GTT) AG 216162-216250 GT AAG (AGA) AG 216415-216486 GT AAG (GGC) TG 216971-217139 GT TGG (ACC) AG 217300-217437 GT AGG (GGT) AG 217537-217680 GC AGG -recovered CodingQuarry_transcript_10377-T1, initial, 213487, 213597 -recovered CodingQuarry_transcript_10377-T1, terminal, 217537, 217680 -recovered CodingQuarry_transcript_10377-T1, internal, 214236, 214298 -recovered CodingQuarry_transcript_10377-T1, internal, 215543, 215632 -recovered CodingQuarry_transcript_10377-T1, internal, 215922, 215987 -recovered CodingQuarry_transcript_10377-T1, internal, 216162, 216250 -recovered CodingQuarry_transcript_10377-T1, internal, 216415, 216486 -recovered CodingQuarry_transcript_10377-T1, internal, 217300, 217437 -recovered CodingQuarry_transcript_10377-T1, internal, 217537, 217680 Couldn't classify 195017, 195283 Couldn't classify 195829, 195996 Sorry, prediction CodingQuarry_transcript_10374-T1 fails validation. (ATG) AC 195017-195283 NN NNN (ACC) CC 195829-195996 GT GAG (AAA) AG 196152-196271 GT ATG (GAG) AG 196393-196447 GT TGG (GCG) AG 196554-196724 GT AGG (CGG) AG 199224-199363 GA AAG -recovered CodingQuarry_transcript_10374-T1, terminal, 199224, 199363 -recovered CodingQuarry_transcript_10374-T1, internal, 196152, 196271 -recovered CodingQuarry_transcript_10374-T1, internal, 196393, 196447 -recovered CodingQuarry_transcript_10374-T1, internal, 196554, 196724 Valid prediction for GlimmerHMM_glimmerT_29974-T1 Valid prediction for snap_scaffold_12-snap.1960-T1 Valid prediction for Augustus_model.g19826.t1 Valid prediction for GlimmerHMM_glimmerT_29975-T1 Valid prediction for HiQ_model.g19815.t1 Valid prediction for GlimmerHMM_glimmerT_29972-T1 Valid prediction for Augustus_model.g19822.t1 Valid prediction for pasa_asmbl_7936.p1 Valid prediction for snap_scaffold_12-snap.1974-T1 Couldn't classify 195017, 195283 Couldn't classify 195829, 195996 Sorry, prediction CodingQuarry_transcript_10373-T1 fails validation. (ATG) AC 195017-195283 NN NNN (ACC) CC 195829-195996 GT GAG (AAA) AG 196152-196271 GT ATG (GAG) AG 196393-196447 GT TGG (GCG) AG 196554-196724 GT AGG (CGG) AG 199224-199363 GA AAG -recovered CodingQuarry_transcript_10373-T1, terminal, 199224, 199363 -recovered CodingQuarry_transcript_10373-T1, internal, 196152, 196271 -recovered CodingQuarry_transcript_10373-T1, internal, 196393, 196447 -recovered CodingQuarry_transcript_10373-T1, internal, 196554, 196724 Valid prediction for HiQ_model.g19831.t1 Valid prediction for GlimmerHMM_glimmerT_29986-T1 Valid prediction for snap_scaffold_12-snap.1976-T1 Valid prediction for GlimmerHMM_glimmerT_29973-T1 Valid prediction for GlimmerHMM_glimmerT_29956-T1 Valid prediction for snap_scaffold_12-snap.1972-T1 Valid prediction for Augustus_model.g19818.t1 Valid prediction for CodingQuarry_transcript_10369-T1 Valid prediction for GlimmerHMM_glimmerT_29967-T1 -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_12-snap.1961-T1 Valid prediction for Augustus_model.g19819.t1 Couldn't classify 60184, 60298 Sorry, prediction pasa_asmbl_9236.p1 fails validation. (ATG) CC 59653-59756 GT AGG (GTT) AG 59955-60056 GT GGG (TTT) AG 60184-60298 GT AGG -recovered pasa_asmbl_9236.p1, initial, 59653, 59756 -recovered pasa_asmbl_9236.p1, internal, 59955, 60056 -recovered pasa_asmbl_9236.p1, internal, 60184, 60298 Valid prediction for GlimmerHMM_glimmerT_29966-T1 Valid prediction for snap_scaffold_12-snap.1994-T1 Valid prediction for snap_scaffold_12-snap.1968-T1 Valid prediction for snap_scaffold_12-snap.1964-T1 Valid prediction for snap_scaffold_12-snap.1962-T1 Couldn't classify 187778, 187902 Sorry, prediction pasa_asmbl_8750.p1 fails validation. (GGA) AG 187778-187902 GT CGG (GAA) AG 188134-188193 GT AGG (TGA) AG 188674-188783 GT ATG (GTC) AG 188938-189055 GT GGG (GGG) AG 189231-189368 GT AGG (GAA) AG 189463-189568 GT CTG (ATG) AG 189671-189764 GT CGG (AGT) AG 189891-189991 GT AGG (GAT) AG 190130-190219 GT AGG (AGC) AG 190642-190820 GT CCG (GTA) AG 191216-191318 GT AGG (TAC) AG 191732-191893 GT AAG (GCC) AG 191993-192098 GT AGG (GCA) AG 192207-192315 GT GGG (GTA) AG 192432-192634 GT AGG (GCA) AG 192879-193033 GG AAG -recovered pasa_asmbl_8750.p1, initial, 189671, 189764 -recovered pasa_asmbl_8750.p1, terminal, 192879, 193033 -recovered pasa_asmbl_8750.p1, internal, 187778, 187902 -recovered pasa_asmbl_8750.p1, internal, 188134, 188193 -recovered pasa_asmbl_8750.p1, internal, 188674, 188783 -recovered pasa_asmbl_8750.p1, internal, 188938, 189055 -recovered pasa_asmbl_8750.p1, internal, 189231, 189368 -recovered pasa_asmbl_8750.p1, internal, 189463, 189568 -recovered pasa_asmbl_8750.p1, internal, 189671, 189764 -recovered pasa_asmbl_8750.p1, internal, 189891, 189991 -recovered pasa_asmbl_8750.p1, internal, 190130, 190219 -recovered pasa_asmbl_8750.p1, internal, 190642, 190820 -recovered pasa_asmbl_8750.p1, internal, 191216, 191318 -recovered pasa_asmbl_8750.p1, internal, 191732, 191893 -recovered pasa_asmbl_8750.p1, internal, 191993, 192098 -recovered pasa_asmbl_8750.p1, internal, 192207, 192315 -recovered pasa_asmbl_8750.p1, internal, 192432, 192634 Valid prediction for GlimmerHMM_glimmerT_29985-T1 Valid prediction for GlimmerHMM_glimmerT_29961-T1 Valid prediction for snap_scaffold_12-snap.1979-T1 Valid prediction for Augustus_model.g19823.t1 Valid prediction for snap_scaffold_12-snap.1978-T1 Valid prediction for Augustus_model.g19828.t1 Valid prediction for CodingQuarry_transcript_10368-T1 Valid prediction for GlimmerHMM_glimmerT_29969-T1 Valid prediction for snap_scaffold_12-snap.1981-T1 Valid prediction for GlimmerHMM_glimmerT_29959-T1 Couldn't classify 151797, 151997 Couldn't classify 152581, 152652 Sorry, prediction pasa_asmbl_9252.p1 fails validation. (CTC) GG 151797-151997 GT AGG (GAG) AG 152089-152178 GT ACG (GTG) AG 152581-152652 GA CCG -recovered pasa_asmbl_9252.p1, internal, 152089, 152178 Valid prediction for GlimmerHMM_glimmerT_29970-T1 Valid prediction for Augustus_model.g19829.t1 Valid prediction for snap_scaffold_12-snap.1993-T1 Valid prediction for CodingQuarry_transcript_10375-T1 Valid prediction for pasa_asmbl_8760.p1 Valid prediction for snap_scaffold_12-snap.1973-T1 Couldn't classify 162278, 162364 Couldn't classify 163455, 163672 Sorry, prediction pasa_asmbl_8753.p1 fails validation. (CCG) GC 162278-162364 GT CGG (GAG) AG 162554-162698 GT CTG (CGG) AG 163455-163672 GA AGG -recovered pasa_asmbl_8753.p1, internal, 162554, 162698 Valid prediction for HiQ_model.g19836.t1 Valid prediction for snap_scaffold_12-snap.1985-T1 Valid prediction for pasa_asmbl_8755.p1 Valid prediction for GlimmerHMM_glimmerT_29979-T1 Valid prediction for snap_scaffold_12-snap.1984-T1 Valid prediction for Augustus_model.g19820.t1 Valid prediction for snap_scaffold_12-snap.1995-T1 Valid prediction for snap_scaffold_12-snap.1959-T1 Valid prediction for snap_scaffold_12-snap.1967-T1 Couldn't classify 52207, 52243 Couldn't classify 52899, 53251 Sorry, prediction pasa_asmbl_8759.p1 fails validation. (GGC) CT 52207-52243 GT TGG (TTC) AG 52360-52431 GT TGG (GTC) AG 52899-53251 AT CCA -recovered pasa_asmbl_8759.p1, internal, 52360, 52431 Valid prediction for GlimmerHMM_glimmerT_29958-T1 Valid prediction for GlimmerHMM_glimmerT_29971-T1 Valid prediction for GlimmerHMM_glimmerT_29978-T1 Valid prediction for snap_scaffold_12-snap.1958-T1 Valid prediction for snap_scaffold_12-snap.1991-T1 Valid prediction for Augustus_model.g19825.t1 Valid prediction for snap_scaffold_12-snap.1983-T1 Valid prediction for GlimmerHMM_glimmerT_29976-T1 Valid prediction for HiQ_model.g19833.t1 Valid prediction for Augustus_model.g19827.t1 Valid prediction for HiQ_model.g19816.t1 Valid prediction for GlimmerHMM_glimmerT_29977-T1 Valid prediction for pasa_asmbl_8761.p1 Valid prediction for snap_scaffold_12-snap.1966-T1 Valid prediction for snap_scaffold_12-snap.1970-T1 Valid prediction for Augustus_model.g19821.t1 Valid prediction for GlimmerHMM_glimmerT_29968-T1 Valid prediction for GlimmerHMM_glimmerT_29963-T1 Valid prediction for GlimmerHMM_glimmerT_29964-T1 Valid prediction for Augustus_model.g19814.t1 Valid prediction for Augustus_model.g19817.t1 Valid prediction for CodingQuarry_transcript_10370-T1 Valid prediction for snap_scaffold_12-snap.1977-T1 Couldn't classify 200084, 200278 Sorry, prediction pasa_asmbl_8748.p1 fails validation. (GAT) TG 200084-200278 GT GGG (TTC) AG 201398-201586 GT TGG (TAT) AG 201691-201765 GT AGG (ATC) AG 201846-201941 GT CTG (TTG) AG 203212-203367 GT AGG (GGC) AG 203496-203579 GT AGG (CTC) AG 203698-203766 CT AGC -recovered pasa_asmbl_8748.p1, terminal, 203698, 203766 -recovered pasa_asmbl_8748.p1, internal, 201398, 201586 -recovered pasa_asmbl_8748.p1, internal, 201691, 201765 -recovered pasa_asmbl_8748.p1, internal, 201846, 201941 -recovered pasa_asmbl_8748.p1, internal, 203212, 203367 -recovered pasa_asmbl_8748.p1, internal, 203496, 203579 Valid prediction for Augustus_model.g19824.t1 Valid prediction for snap_scaffold_12-snap.1987-T1 Valid prediction for GlimmerHMM_glimmerT_29962-T1 Valid prediction for snap_scaffold_12-snap.1975-T1 Valid prediction for Augustus_model.g19830.t1 Valid prediction for pasa_asmbl_8754.p1 -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: snap lend_intergenic: 51170, rend_intergenic: 48977 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 53042, rend_intergenic: 51417 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 74168, rend_intergenic: 67744 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 145543, rend_intergenic: 142389 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 149166, rend_intergenic: 146047 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 195986, rend_intergenic: 195017 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 220655 -exon list size: 415 building trellis 0.2 0.5 0.7 1.0 1.2 1.4 1.7 1.9 2.2 2.4 2.6 2.9 3.1 3.4 3.6 3.8 4.1 4.3 4.6 4.8 5.0 5.3 5.5 5.8 6.0 6.2 6.5 6.7 7.0 7.2 7.4 7.7 7.9 8.2 8.4 8.6 8.9 9.1 9.4 9.6 9.8 10.1 10.3 10.6 10.8 11.0 11.3 11.5 11.8 12.0 12.2 12.5 12.7 12.9 13.2 13.4 13.7 13.9 14.1 14.4 14.6 14.9 15.1 15.3 15.6 15.8 16.1 16.3 16.5 16.8 17.0 17.3 17.5 17.7 18.0 18.2 18.5 18.7 18.9 19.2 19.4 19.7 19.9 20.1 20.4 20.6 20.9 21.1 21.3 21.6 21.8 22.1 22.3 22.5 22.8 23.0 23.3 23.5 23.7 24.0 24.2 24.5 24.7 24.9 25.2 25.4 25.7 25.9 26.1 26.4 26.6 26.9 27.1 27.3 27.6 27.8 28.1 28.3 28.5 28.8 29.0 29.3 29.5 29.7 30.0 30.2 30.5 30.7 30.9 31.2 31.4 31.7 31.9 32.1 32.4 32.6 32.9 33.1 33.3 33.6 33.8 34.1 34.3 34.5 34.8 35.0 35.3 35.5 35.7 36.0 36.2 36.5 36.7 36.9 37.2 37.4 37.6 37.9 38.1 38.4 38.6 38.8 39.1 39.3 39.6 39.8 40.0 40.3 40.5 40.8 41.0 41.2 41.5 41.7 42.0 42.2 42.4 42.7 42.9 43.2 43.4 43.6 43.9 44.1 44.4 44.6 44.8 45.1 45.3 45.6 45.8 46.0 46.3 46.5 46.8 47.0 47.2 47.5 47.7 48.0 48.2 48.4 48.7 48.9 49.2 49.4 49.6 49.9 50.1 50.4 50.6 50.8 51.1 51.3 51.6 51.8 52.0 52.3 52.5 52.8 53.0 53.2 53.5 53.7 54.0 54.2 54.4 54.7 54.9 55.2 55.4 55.6 55.9 56.1 56.4 56.6 56.8 57.1 57.3 57.6 57.8 58.0 58.3 58.5 58.8 59.0 59.2 59.5 59.7 60.0 60.2 60.4 60.7 60.9 61.2 61.4 61.6 61.9 62.1 62.4 62.6 62.8 63.1 63.3 63.5 63.8 64.0 64.3 64.5 64.7 65.0 65.2 65.5 65.7 65.9 66.2 66.4 66.7 66.9 67.1 67.4 67.6 67.9 68.1 68.3 68.6 68.8 69.1 69.3 69.5 69.8 70.0 70.3 70.5 70.7 71.0 71.2 71.5 71.7 71.9 72.2 72.4 72.7 72.9 73.1 73.4 73.6 73.9 74.1 74.3 74.6 74.8 75.1 75.3 75.5 75.8 76.0 76.3 76.5 76.7 77.0 77.2 77.5 77.7 77.9 78.2 78.4 78.7 78.9 79.1 79.4 79.6 79.9 80.1 80.3 80.6 80.8 81.1 81.3 81.5 81.8 82.0 82.3 82.5 82.7 83.0 83.2 83.5 83.7 83.9 84.2 84.4 84.7 84.9 85.1 85.4 85.6 85.9 86.1 86.3 86.6 86.8 87.1 87.3 87.5 87.8 88.0 88.2 88.5 88.7 89.0 89.2 89.4 89.7 89.9 90.2 90.4 90.6 90.9 91.1 91.4 91.6 91.8 92.1 92.3 92.6 92.8 93.0 93.3 93.5 93.8 94.0 94.2 94.5 94.7 95.0 95.2 95.4 95.7 95.9 96.2 96.4 96.6 96.9 97.1 97.4 97.6 97.8 98.1 98.3 98.6 98.8 99.0 99.3 99.5 99.8 -found 32 predictions from path traversal Error with prediction: snap lend_intergenic: 51170, rend_intergenic: 48977 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 53042, rend_intergenic: 51417 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 74168, rend_intergenic: 67744 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 145543, rend_intergenic: 142389 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 149166, rend_intergenic: 146047 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 195986, rend_intergenic: 195017 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -reporting highest scoring path thru the trellis. -found 27 predictions persist after filtering for low support -building DP trellis -building trellis in range 1 - 13802 -exon list size: 9 building trellis 9.1 18.2 27.3 36.4 45.5 54.5 63.6 72.7 81.8 90.9 -found 1 predictions from path traversal GOT 5prime partial gene. -reporting highest scoring path thru the trellis. -found 1 predictions persist after filtering for low support -building DP trellis -building trellis in range 698 - 13802 -exon list size: 7 building trellis 11.1 22.2 33.3 44.4 55.6 66.7 77.8 88.9 -found 1 predictions from path traversal GOT 5prime partial gene. -reporting highest scoring path thru the trellis. -found 0 predictions persist after filtering for low support -building DP trellis -building trellis in range 698 - 13597 -exon list size: 6 building trellis 12.5 25.0 37.5 50.0 62.5 75.0 87.5 -found 1 predictions from path traversal GOT 5prime partial gene. -reporting highest scoring path thru the trellis. -found 0 predictions persist after filtering for low support -building DP trellis -building trellis in range 698 - 11759 -exon list size: 4 building trellis 16.7 33.3 50.0 66.7 83.3 -found 1 predictions from path traversal GOT 5prime partial gene. -reporting highest scoring path thru the trellis. -found 0 predictions persist after filtering for low support -building DP trellis -building trellis in range 698 - 11072 -exon list size: 2 building trellis 25.0 50.0 75.0 -found 1 predictions from path traversal -reporting highest scoring path thru the trellis. -found 0 predictions persist after filtering for low support