-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_1129

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 616, 808
Sorry, prediction snap_scaffold_1129-snap.1-T1 fails validation.
(ATT)	 AG	616-808	GT	ACG
(GAC)	 AG	838-893	AG	AAA
-recovered snap_scaffold_1129-snap.1-T1, terminal, 838, 893
-recovered snap_scaffold_1129-snap.1-T1, internal, 616, 808

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_1129-snap.2-T1
Couldn't classify 1405, 1593
Sorry, prediction GlimmerHMM_glimmerT_60986-T1 fails validation.
(TCA)	 AG	1405-1593	GT	GGG
(CTC)	 AG	2335-2552	TT	GAT
-recovered GlimmerHMM_glimmerT_60986-T1, terminal, 2335, 2552
-recovered GlimmerHMM_glimmerT_60986-T1, internal, 1405, 1593
Valid prediction for Augustus_model.g40370.t1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 3200
-exon list size: 6


building trellis

12.5    
25.0    
37.5    
50.0    
62.5    
75.0    
87.5    
-found 1 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 1 predictions persist after filtering for low support