-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_11/scaffold_11_8175107-8396425

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_11-snap.1872-T1
Valid prediction for snap_scaffold_11-snap.1899-T1
Valid prediction for GlimmerHMM_glimmerT_27515-T1
Couldn't classify 179110, 179157
Sorry, prediction pasa_asmbl_5752.p1 fails validation.
(ATG)	 CC	177830-177922	GT	TTG
(CCA)	 AG	178092-178347	GT	TGG
(GTA)	 AG	178603-178641	GT	AAG
(AGA)	 AG	178862-178965	GT	AGG
(CTG)	 AG	179110-179157	CC	CCC
-recovered pasa_asmbl_5752.p1, initial, 177830, 177922
-recovered pasa_asmbl_5752.p1, internal, 178092, 178347
-recovered pasa_asmbl_5752.p1, internal, 178603, 178641
-recovered pasa_asmbl_5752.p1, internal, 178862, 178965
Valid prediction for snap_scaffold_11-snap.1874-T1
Couldn't classify 92644, 92656
Sorry, prediction pasa_asmbl_5739.p1 fails validation.
(ATG)	 CC	91909-92489	GT	AGG
(GAA)	 AG	92644-92656	AG	AGA
-recovered pasa_asmbl_5739.p1, initial, 91909, 92489
Couldn't classify 87666, 87821
Couldn't classify 88588, 88647
Sorry, prediction pasa_asmbl_6324.p1 fails validation.
(CCT)	 AC	87666-87821	GT	AGG
(GTG)	 AG	88150-88296	GT	AGG
(CCG)	 AG	88588-88647	AC	GGA
-recovered pasa_asmbl_6324.p1, internal, 88150, 88296
Valid prediction for GlimmerHMM_glimmerT_27518-T1
Valid prediction for GlimmerHMM_glimmerT_27493-T1
Valid prediction for snap_scaffold_11-snap.1884-T1
Valid prediction for snap_scaffold_11-snap.1883-T1
Valid prediction for Augustus_model.g18198.t1
Valid prediction for Augustus_model.g18192.t1
Valid prediction for Augustus_model.g18213.t1
Valid prediction for snap_scaffold_11-snap.1873-T1
Valid prediction for GlimmerHMM_glimmerT_27523-T1
Valid prediction for CodingQuarry_transcript_8159-T1
Valid prediction for snap_scaffold_11-snap.1867-T1
Valid prediction for GlimmerHMM_glimmerT_27509-T1
Valid prediction for GlimmerHMM_glimmerT_27491-T1
Valid prediction for Augustus_model.g18201.t1
Valid prediction for CodingQuarry_transcript_8164-T1
Valid prediction for Augustus_model.g18202.t1
Valid prediction for HiQ_model.g18218.t1
Valid prediction for GlimmerHMM_glimmerT_27522-T1
Valid prediction for GlimmerHMM_glimmerT_27496-T1
Couldn't classify 70304, 70384
Sorry, prediction pasa_asmbl_5738.p1 fails validation.
(TTC)	 AG	70304-70384	GT	AGG
(GCT)	 AG	70474-70575	GT	AGG
(GAC)	 AG	70806-70953	GT	CCG
(AGA)	 AG	71090-71148	GT	AGG
(GCT)	 AG	71243-71384	GT	AGG
(TGA)	 AG	71679-71886	GT	GGG
(CTA)	 AG	71977-72111	GT	CGG
(CTT)	 AG	72193-72259	GT	AGG
(AAC)	 AG	72372-72560	AT	GAA
-recovered pasa_asmbl_5738.p1, terminal, 72372, 72560
-recovered pasa_asmbl_5738.p1, internal, 70304, 70384
-recovered pasa_asmbl_5738.p1, internal, 70474, 70575
-recovered pasa_asmbl_5738.p1, internal, 70806, 70953
-recovered pasa_asmbl_5738.p1, internal, 71090, 71148
-recovered pasa_asmbl_5738.p1, internal, 71243, 71384
-recovered pasa_asmbl_5738.p1, internal, 71679, 71886
-recovered pasa_asmbl_5738.p1, internal, 71977, 72111
-recovered pasa_asmbl_5738.p1, internal, 72193, 72259
Valid prediction for GlimmerHMM_glimmerT_27500-T1
Valid prediction for snap_scaffold_11-snap.1892-T1
Valid prediction for GlimmerHMM_glimmerT_27513-T1
Valid prediction for snap_scaffold_11-snap.1905-T1
Valid prediction for snap_scaffold_11-snap.1885-T1
Valid prediction for CodingQuarry_transcript_8157-T1
Valid prediction for snap_scaffold_11-snap.1896-T1
Sorry, intron length (8) is less than minimum required (10)
Couldn't classify 175927, 176033
Couldn't classify 177426, 177676
Sorry, prediction pasa_asmbl_6315.p1 fails validation.
(TCA)	 CA	175927-176033	GT	AAG
(GTG)	 AG	176207-176369	GT	AGG
(GCG)	 AG	177206-177323	GT	TGG
(GGA)	 AG	177426-177676	CC	TGC
-recovered pasa_asmbl_6315.p1, internal, 176207, 176369
-recovered pasa_asmbl_6315.p1, internal, 177206, 177323
Valid prediction for CodingQuarry_transcript_8154-T1
Couldn't classify 68066, 68194
Couldn't classify 69941, 69964
Sorry, prediction pasa_asmbl_5737.p1 fails validation.
(GAG)	 TA	68066-68194	GT	AGG
(GTG)	 AG	68297-68408	GT	CTG
(TCA)	 AG	68579-68661	GT	ACG
(TTC)	 AG	68780-68917	GT	AGG
(GTG)	 AG	69073-69165	GT	CGG
(GCA)	 AG	69563-69709	GT	AGG
(AAC)	 AG	69941-69964	GA	GGG
-recovered pasa_asmbl_5737.p1, internal, 68297, 68408
-recovered pasa_asmbl_5737.p1, internal, 68579, 68661
-recovered pasa_asmbl_5737.p1, internal, 68780, 68917
-recovered pasa_asmbl_5737.p1, internal, 69073, 69165
-recovered pasa_asmbl_5737.p1, internal, 69563, 69709
Valid prediction for GlimmerHMM_glimmerT_27503-T1
Valid prediction for snap_scaffold_11-snap.1893-T1
Valid prediction for snap_scaffold_11-snap.1904-T1
Valid prediction for snap_scaffold_11-snap.1882-T1
Valid prediction for pasa_asmbl_5757.p1
Valid prediction for snap_scaffold_11-snap.1878-T1
Valid prediction for HiQ_model.g18203.t1
Valid prediction for Augustus_model.g18219.t1
Valid prediction for snap_scaffold_11-snap.1901-T1
Valid prediction for GlimmerHMM_glimmerT_27524-T1
Valid prediction for CodingQuarry_transcript_8165-T1
Valid prediction for HiQ_model.g18209.t1
Valid prediction for GlimmerHMM_glimmerT_27495-T1
Valid prediction for Augustus_model.g18196.t1
Valid prediction for GlimmerHMM_glimmerT_27508-T1
Valid prediction for GlimmerHMM_glimmerT_27514-T1
Valid prediction for Augustus_model.g18206.t1
Valid prediction for CodingQuarry_transcript_8161-T1
Valid prediction for GlimmerHMM_glimmerT_27519-T1
Valid prediction for snap_scaffold_11-snap.1895-T1
Valid prediction for snap_scaffold_11-snap.1906-T1
Sorry, intron length (7) is less than minimum required (10)
Valid prediction for snap_scaffold_11-snap.1870-T1
Couldn't classify 189766, 189838
Couldn't classify 192188, 192399
Sorry, prediction pasa_asmbl_5754.p1 fails validation.
(TGC)	 AG	189766-189838	GT	AGG
(AGC)	 AG	191637-191724	GT	TGG
(GTT)	 AG	191834-191889	GT	AGG
(GAT)	 AG	192050-192094	GT	CGG
(GTG)	 AG	192188-192399	AC	GGA
-recovered pasa_asmbl_5754.p1, internal, 189766, 189838
-recovered pasa_asmbl_5754.p1, internal, 191637, 191724
-recovered pasa_asmbl_5754.p1, internal, 191834, 191889
-recovered pasa_asmbl_5754.p1, internal, 192050, 192094
Valid prediction for Augustus_model.g18195.t1
Valid prediction for snap_scaffold_11-snap.1887-T1
Valid prediction for Augustus_model.g18216.t1
Valid prediction for pasa_asmbl_5741.p1
Valid prediction for GlimmerHMM_glimmerT_27511-T1
Valid prediction for GlimmerHMM_glimmerT_27507-T1
Valid prediction for snap_scaffold_11-snap.1903-T1
Valid prediction for GlimmerHMM_glimmerT_27502-T1
Valid prediction for GlimmerHMM_glimmerT_27512-T1
Valid prediction for GlimmerHMM_glimmerT_27505-T1
Valid prediction for GlimmerHMM_glimmerT_27506-T1
Valid prediction for Augustus_model.g18197.t1
Valid prediction for snap_scaffold_11-snap.1869-T1
Valid prediction for CodingQuarry_transcript_8166-T1
Valid prediction for GlimmerHMM_glimmerT_27498-T1
Valid prediction for Augustus_model.g18194.t1
Valid prediction for HiQ_model.g18205.t1
Valid prediction for Augustus_model.g18217.t1
Valid prediction for GlimmerHMM_glimmerT_27499-T1
Valid prediction for pasa_asmbl_5750.p1
Valid prediction for snap_scaffold_11-snap.1881-T1
Valid prediction for HiQ_model.g18207.t1
Valid prediction for pasa_asmbl_5758.p1
Valid prediction for Augustus_model.g18211.t1
Valid prediction for snap_scaffold_11-snap.1877-T1
Couldn't classify 151338, 151394
Sorry, prediction pasa_asmbl_6277.p1 fails validation.
(GAA)	 AG	151338-151394	GT	AGG
(GGC)	 AG	151517-151678	GT	GGG
(TAC)	 AG	152049-152150	GT	GAG
-recovered pasa_asmbl_6277.p1, terminal, 152049, 152150
-recovered pasa_asmbl_6277.p1, internal, 151338, 151394
-recovered pasa_asmbl_6277.p1, internal, 151517, 151678
-recovered pasa_asmbl_6277.p1, internal, 152049, 152150

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for Augustus_model.g18199.t1
Valid prediction for CodingQuarry_transcript_8158-T1
Valid prediction for GlimmerHMM_glimmerT_27492-T1
Valid prediction for GlimmerHMM_glimmerT_27510-T1
Valid prediction for snap_scaffold_11-snap.1888-T1
Valid prediction for GlimmerHMM_glimmerT_27516-T1
Valid prediction for CodingQuarry_transcript_8156-T1
Valid prediction for snap_scaffold_11-snap.1865-T1
Valid prediction for snap_scaffold_11-snap.1880-T1
Valid prediction for GlimmerHMM_glimmerT_27497-T1
Valid prediction for snap_scaffold_11-snap.1889-T1
Valid prediction for snap_scaffold_11-snap.1886-T1
Valid prediction for HiQ_model.g18214.t1
Valid prediction for snap_scaffold_11-snap.1894-T1
Valid prediction for pasa_asmbl_6855.p1
Valid prediction for HiQ_model.g18191.t1
Valid prediction for GlimmerHMM_glimmerT_27504-T1
Valid prediction for HiQ_model.g18215.t1
Valid prediction for pasa_asmbl_6851.p1
Valid prediction for GlimmerHMM_glimmerT_27521-T1
Valid prediction for GlimmerHMM_glimmerT_27501-T1
Couldn't classify 18982, 19041
Couldn't classify 19143, 19215
Sorry, prediction CodingQuarry_transcript_8163-T1 fails validation.
(ATG)	 AA	17447-17449	GT	TGG
(AGT)	 AG	18328-18424	GT	CAG
(TGA)	 AG	18552-18601	GC	AGG
(GAT)	 AG	18982-19041	AT	TCA
(TAT)	 TC	19143-19215	GT	GGG
(GAT)	 AG	19323-19396	GT	AGG
(GTT)	 AG	19676-19747	AA	AGA
-recovered CodingQuarry_transcript_8163-T1, initial, 17447, 17449
-recovered CodingQuarry_transcript_8163-T1, terminal, 19676, 19747
-recovered CodingQuarry_transcript_8163-T1, internal, 18328, 18424
-recovered CodingQuarry_transcript_8163-T1, internal, 18552, 18601
-recovered CodingQuarry_transcript_8163-T1, internal, 19323, 19396
Valid prediction for snap_scaffold_11-snap.1898-T1
Sorry, intron length (7) is less than minimum required (10)
Valid prediction for snap_scaffold_11-snap.1868-T1
Valid prediction for snap_scaffold_11-snap.1890-T1
Valid prediction for GlimmerHMM_glimmerT_27520-T1
Valid prediction for snap_scaffold_11-snap.1897-T1
Valid prediction for HiQ_model.g18193.t1
Valid prediction for GlimmerHMM_glimmerT_27494-T1
Valid prediction for CodingQuarry_transcript_8162-T1
Valid prediction for CodingQuarry_transcript_8155-T1
Couldn't classify 214428, 214642
Sorry, prediction pasa_asmbl_6848.p1 fails validation.
(ACA)	 AG	214428-214642	GT	TTG
(CTT)	 AG	214989-215104	GT	GGG
(GCT)	 AG	215364-215409	GT	CAG
(CTG)	 AG	215680-215808	GT	CTG
(AAT)	 AG	215984-216029	GT	GGG
(CGT)	 AG	216160-216261	GT	TGG
(ATA)	 AG	216412-216478	GT	GAG
(AGA)	 AG	216843-217087	AG	AGA
-recovered pasa_asmbl_6848.p1, terminal, 216843, 217087
-recovered pasa_asmbl_6848.p1, internal, 214428, 214642
-recovered pasa_asmbl_6848.p1, internal, 214989, 215104
-recovered pasa_asmbl_6848.p1, internal, 215364, 215409
-recovered pasa_asmbl_6848.p1, internal, 215680, 215808
-recovered pasa_asmbl_6848.p1, internal, 215984, 216029
-recovered pasa_asmbl_6848.p1, internal, 216160, 216261
-recovered pasa_asmbl_6848.p1, internal, 216412, 216478
Valid prediction for GlimmerHMM_glimmerT_27517-T1
Valid prediction for snap_scaffold_11-snap.1891-T1
Valid prediction for snap_scaffold_11-snap.1879-T1
Valid prediction for HiQ_model.g18208.t1
Valid prediction for snap_scaffold_11-snap.1876-T1
Valid prediction for snap_scaffold_11-snap.1902-T1
Valid prediction for snap_scaffold_11-snap.1871-T1
Valid prediction for pasa_asmbl_6856.p1
Valid prediction for snap_scaffold_11-snap.1875-T1
Valid prediction for Augustus_model.g18204.t1
Valid prediction for snap_scaffold_11-snap.1866-T1
Valid prediction for snap_scaffold_11-snap.1900-T1
Valid prediction for Augustus_model.g18212.t1
Valid prediction for Augustus_model.g18210.t1
Valid prediction for HiQ_model.g18200.t1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 53964, rend_intergenic: 47494  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 58208, rend_intergenic: 54075  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 72560, rend_intergenic: 72452  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 114294, rend_intergenic: 111383  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 143195, rend_intergenic: 123347  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 144855, rend_intergenic: 143235  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 169463, rend_intergenic: 164158  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 172447, rend_intergenic: 169664  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 184376, rend_intergenic: 182468  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 221319
-exon list size: 558


building trellis

0.2    
0.4    
0.5    
0.7    
0.9    
1.1    
1.2    
1.4    
1.6    
1.8    
2.0    
2.1    
2.3    
2.5    
2.7    
2.9    
3.0    
3.2    
3.4    
3.6    
3.8    
3.9    
4.1    
4.3    
4.5    
4.6    
4.8    
5.0    
5.2    
5.4    
5.5    
5.7    
5.9    
6.1    
6.2    
6.4    
6.6    
6.8    
7.0    
7.1    
7.3    
7.5    
7.7    
7.9    
8.0    
8.2    
8.4    
8.6    
8.8    
8.9    
9.1    
9.3    
9.5    
9.6    
9.8    
10.0    
10.2    
10.4    
10.5    
10.7    
10.9    
11.1    
11.2    
11.4    
11.6    
11.8    
12.0    
12.1    
12.3    
12.5    
12.7    
12.9    
13.0    
13.2    
13.4    
13.6    
13.8    
13.9    
14.1    
14.3    
14.5    
14.6    
14.8    
15.0    
15.2    
15.4    
15.5    
15.7    
15.9    
16.1    
16.2    
16.4    
16.6    
16.8    
17.0    
17.1    
17.3    
17.5    
17.7    
17.9    
18.0    
18.2    
18.4    
18.6    
18.8    
18.9    
19.1    
19.3    
19.5    
19.6    
19.8    
20.0    
20.2    
20.4    
20.5    
20.7    
20.9    
21.1    
21.2    
21.4    
21.6    
21.8    
22.0    
22.1    
22.3    
22.5    
22.7    
22.9    
23.0    
23.2    
23.4    
23.6    
23.8    
23.9    
24.1    
24.3    
24.5    
24.6    
24.8    
25.0    
25.2    
25.4    
25.5    
25.7    
25.9    
26.1    
26.2    
26.4    
26.6    
26.8    
27.0    
27.1    
27.3    
27.5    
27.7    
27.9    
28.0    
28.2    
28.4    
28.6    
28.7    
28.9    
29.1    
29.3    
29.5    
29.6    
29.8    
30.0    
30.2    
30.4    
30.5    
30.7    
30.9    
31.1    
31.2    
31.4    
31.6    
31.8    
32.0    
32.1    
32.3    
32.5    
32.7    
32.9    
33.0    
33.2    
33.4    
33.6    
33.8    
33.9    
34.1    
34.3    
34.5    
34.6    
34.8    
35.0    
35.2    
35.4    
35.5    
35.7    
35.9    
36.1    
36.2    
36.4    
36.6    
36.8    
37.0    
37.1    
37.3    
37.5    
37.7    
37.9    
38.0    
38.2    
38.4    
38.6    
38.8    
38.9    
39.1    
39.3    
39.5    
39.6    
39.8    
40.0    
40.2    
40.4    
40.5    
40.7    
40.9    
41.1    
41.2    
41.4    
41.6    
41.8    
42.0    
42.1    
42.3    
42.5    
42.7    
42.9    
43.0    
43.2    
43.4    
43.6    
43.8    
43.9    
44.1    
44.3    
44.5    
44.6    
44.8    
45.0    
45.2    
45.4    
45.5    
45.7    
45.9    
46.1    
46.2    
46.4    
46.6    
46.8    
47.0    
47.1    
47.3    
47.5    
47.7    
47.9    
48.0    
48.2    
48.4    
48.6    
48.8    
48.9    
49.1    
49.3    
49.5    
49.6    
49.8    
50.0    
50.2    
50.4    
50.5    
50.7    
50.9    
51.1    
51.2    
51.4    
51.6    
51.8    
52.0    
52.1    
52.3    
52.5    
52.7    
52.9    
53.0    
53.2    
53.4    
53.6    
53.8    
53.9    
54.1    
54.3    
54.5    
54.6    
54.8    
55.0    
55.2    
55.4    
55.5    
55.7    
55.9    
56.1    
56.2    
56.4    
56.6    
56.8    
57.0    
57.1    
57.3    
57.5    
57.7    
57.9    
58.0    
58.2    
58.4    
58.6    
58.8    
58.9    
59.1    
59.3    
59.5    
59.6    
59.8    
60.0    
60.2    
60.4    
60.5    
60.7    
60.9    
61.1    
61.3    
61.4    
61.6    
61.8    
62.0    
62.1    
62.3    
62.5    
62.7    
62.9    
63.0    
63.2    
63.4    
63.6    
63.7    
63.9    
64.1    
64.3    
64.5    
64.6    
64.8    
65.0    
65.2    
65.4    
65.5    
65.7    
65.9    
66.1    
66.2    
66.4    
66.6    
66.8    
67.0    
67.1    
67.3    
67.5    
67.7    
67.9    
68.0    
68.2    
68.4    
68.6    
68.8    
68.9    
69.1    
69.3    
69.5    
69.6    
69.8    
70.0    
70.2    
70.4    
70.5    
70.7    
70.9    
71.1    
71.2    
71.4    
71.6    
71.8    
72.0    
72.1    
72.3    
72.5    
72.7    
72.9    
73.0    
73.2    
73.4    
73.6    
73.8    
73.9    
74.1    
74.3    
74.5    
74.6    
74.8    
75.0    
75.2    
75.4    
75.5    
75.7    
75.9    
76.1    
76.2    
76.4    
76.6    
76.8    
77.0    
77.1    
77.3    
77.5    
77.7    
77.9    
78.0    
78.2    
78.4    
78.6    
78.8    
78.9    
79.1    
79.3    
79.5    
79.6    
79.8    
80.0    
80.2    
80.4    
80.5    
80.7    
80.9    
81.1    
81.2    
81.4    
81.6    
81.8    
82.0    
82.1    
82.3    
82.5    
82.7    
82.9    
83.0    
83.2    
83.4    
83.6    
83.8    
83.9    
84.1    
84.3    
84.5    
84.6    
84.8    
85.0    
85.2    
85.4    
85.5    
85.7    
85.9    
86.1    
86.2    
86.4    
86.6    
86.8    
87.0    
87.1    
87.3    
87.5    
87.7    
87.9    
88.0    
88.2    
88.4    
88.6    
88.8    
88.9    
89.1    
89.3    
89.5    
89.6    
89.8    
90.0    
90.2    
90.4    
90.5    
90.7    
90.9    
91.1    
91.2    
91.4    
91.6    
91.8    
92.0    
92.1    
92.3    
92.5    
92.7    
92.9    
93.0    
93.2    
93.4    
93.6    
93.8    
93.9    
94.1    
94.3    
94.5    
94.6    
94.8    
95.0    
95.2    
95.4    
95.5    
95.7    
95.9    
96.1    
96.2    
96.4    
96.6    
96.8    
97.0    
97.1    
97.3    
97.5    
97.7    
97.9    
98.0    
98.2    
98.4    
98.6    
98.8    
98.9    
99.1    
99.3    
99.5    
99.6    
99.8    
-found 32 predictions from path traversal
Error with prediction: snap lend_intergenic: 53964, rend_intergenic: 47494  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 58208, rend_intergenic: 54075  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 72560, rend_intergenic: 72452  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 114294, rend_intergenic: 111383  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 143195, rend_intergenic: 123347  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 144855, rend_intergenic: 143235  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 169463, rend_intergenic: 164158  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 172447, rend_intergenic: 169664  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 184376, rend_intergenic: 182468  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 28 predictions persist after filtering for low support