-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_11/scaffold_11_3457755-3635720

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_11-snap.884-T1
Valid prediction for GlimmerHMM_glimmerT_26864-T1
Valid prediction for pasa_asmbl_5447.p1
Valid prediction for GlimmerHMM_glimmerT_26855-T1
Couldn't classify 27447, 28379
Couldn't classify 28536, 28691
Sorry, prediction pasa_asmbl_5435.p1 fails validation.
(GCC)	 CA	27447-28379	GT	AGG
(CCC)	 AG	28536-28691	GG	CAG
Valid prediction for snap_scaffold_11-snap.873-T1
Valid prediction for Augustus_model.g17763.t1
Couldn't classify 24040, 24153
Couldn't classify 25121, 25201
Sorry, prediction pasa_asmbl_5433.p1 fails validation.
(TCA)	 CC	24040-24153	GT	AGG
(GCT)	 AG	24304-24416	GT	AGG
(GTT)	 AG	24712-24880	GT	ATG
(GAG)	 AG	25121-25201	GG	ACG
-recovered pasa_asmbl_5433.p1, internal, 24304, 24416
-recovered pasa_asmbl_5433.p1, internal, 24712, 24880
Valid prediction for snap_scaffold_11-snap.866-T1
Valid prediction for Augustus_model.g17764.t1
Valid prediction for GlimmerHMM_glimmerT_26866-T1
Valid prediction for pasa_asmbl_5443.p1
Valid prediction for snap_scaffold_11-snap.878-T1
Valid prediction for snap_scaffold_11-snap.871-T1
Valid prediction for snap_scaffold_11-snap.858-T1
Valid prediction for Augustus_model.g17761.t1
Valid prediction for snap_scaffold_11-snap.860-T1
Couldn't classify 39101, 39298
Couldn't classify 41285, 41452
Sorry, prediction pasa_asmbl_5441.p1 fails validation.
(GAG)	 TG	39101-39298	GT	AGG
(GCT)	 AG	39475-39795	GT	AGG
(GCT)	 AG	39919-40248	GT	AGG
(GCT)	 AG	40358-40687	GT	AGG
(GCT)	 AG	40797-41141	GT	AGG
(ACC)	 AG	41285-41452	GA	AGG
-recovered pasa_asmbl_5441.p1, internal, 39475, 39795
-recovered pasa_asmbl_5441.p1, internal, 39919, 40248
-recovered pasa_asmbl_5441.p1, internal, 40358, 40687
-recovered pasa_asmbl_5441.p1, internal, 40797, 41141
Valid prediction for GlimmerHMM_glimmerT_26861-T1
Valid prediction for snap_scaffold_11-snap.891-T1
Valid prediction for snap_scaffold_11-snap.879-T1
Valid prediction for GlimmerHMM_glimmerT_26851-T1
Valid prediction for GlimmerHMM_glimmerT_26853-T1
Valid prediction for snap_scaffold_11-snap.864-T1
Couldn't classify 64511, 64741
Couldn't classify 65755, 65788
Sorry, prediction pasa_asmbl_5448.p1 fails validation.
(GAG)	 AG	64511-64741	GT	AGG
(GCC)	 AG	65283-65402	GT	AGG
(GAG)	 AG	65523-65644	GT	CGG
(GTG)	 AG	65755-65788	GA	GGG
-recovered pasa_asmbl_5448.p1, internal, 64511, 64741
-recovered pasa_asmbl_5448.p1, internal, 65283, 65402
-recovered pasa_asmbl_5448.p1, internal, 65523, 65644
Valid prediction for snap_scaffold_11-snap.885-T1
Valid prediction for snap_scaffold_11-snap.870-T1
Couldn't classify 20562, 20597
Couldn't classify 21168, 21237
Sorry, prediction pasa_asmbl_5432.p1 fails validation.
(CTG)	 TT	20562-20597	GT	ACG
(ATT)	 AG	20710-20921	GT	AAG
(GGC)	 AG	21168-21237	CT	TCC
-recovered pasa_asmbl_5432.p1, internal, 20710, 20921
Valid prediction for snap_scaffold_11-snap.889-T1
Valid prediction for snap_scaffold_11-snap.874-T1
Valid prediction for GlimmerHMM_glimmerT_26850-T1
Valid prediction for Augustus_model.g17769.t1
Valid prediction for GlimmerHMM_glimmerT_26852-T1
Valid prediction for snap_scaffold_11-snap.877-T1
Valid prediction for snap_scaffold_11-snap.861-T1
Couldn't classify 80598, 80765
Sorry, prediction pasa_asmbl_5449.p1 fails validation.
(ATG)	 TG	69648-69809	GT	AGG
(AGG)	 AG	70265-70411	GT	AGG
(GAC)	 AG	70551-70727	GT	AGG
(GTG)	 AG	70924-71079	GT	AGG
(GTG)	 AG	71238-71375	GT	AGG
(AAC)	 AG	71503-71673	GT	AGG
(CGT)	 AG	71780-71913	GT	AGG
(GTG)	 AG	72254-72458	GT	ATG
(AGT)	 AG	72623-72805	GT	AGG
(GAG)	 AG	72925-73038	GT	AGG
(GAT)	 AG	73139-73293	GT	AGG
(TGA)	 AG	73398-73545	GT	AGG
(AGG)	 AG	73649-73743	GT	AGG
(GAG)	 AG	73843-74074	GT	AGG
(CAT)	 AG	74386-74580	GT	AGG
(AAC)	 AG	76801-76926	GT	AGG
(GAG)	 AG	77584-77739	GT	AGG
(GTG)	 AG	79520-79678	GT	AGG
(GAC)	 AG	80598-80765	TA	GGT
-recovered pasa_asmbl_5449.p1, initial, 69648, 69809
-recovered pasa_asmbl_5449.p1, internal, 70265, 70411
-recovered pasa_asmbl_5449.p1, internal, 70551, 70727
-recovered pasa_asmbl_5449.p1, internal, 70924, 71079
-recovered pasa_asmbl_5449.p1, internal, 71238, 71375
-recovered pasa_asmbl_5449.p1, internal, 71503, 71673
-recovered pasa_asmbl_5449.p1, internal, 71780, 71913
-recovered pasa_asmbl_5449.p1, internal, 72254, 72458
-recovered pasa_asmbl_5449.p1, internal, 72623, 72805
-recovered pasa_asmbl_5449.p1, internal, 72925, 73038
-recovered pasa_asmbl_5449.p1, internal, 73139, 73293
-recovered pasa_asmbl_5449.p1, internal, 73398, 73545
-recovered pasa_asmbl_5449.p1, internal, 73649, 73743
-recovered pasa_asmbl_5449.p1, internal, 73843, 74074
-recovered pasa_asmbl_5449.p1, internal, 74386, 74580
-recovered pasa_asmbl_5449.p1, internal, 76801, 76926
-recovered pasa_asmbl_5449.p1, internal, 77584, 77739
-recovered pasa_asmbl_5449.p1, internal, 79520, 79678
Valid prediction for snap_scaffold_11-snap.869-T1
Couldn't classify 84279, 84304
Sorry, prediction pasa_asmbl_5451.p1 fails validation.
(CAT)	 GC	84279-84304	GT	CCG
(GGT)	 AG	85635-85797	GT	AGG
(GAC)	 AG	86649-86836	GT	AAG
(GAT)	 AG	87097-87247	GT	AGG
(GCC)	 AG	88167-88349	GT	AGG
(TAC)	 AG	89359-89496	GT	ACG
(GCC)	 AG	90097-90291	GT	CGG
(GTC)	 AG	90849-91158	GT	AGG
(AGG)	 AG	91508-91576	GT	GGG
(TGA)	 AG	92125-92261	GT	ATG
(GCT)	 AG	93282-93623	GT	AGG
(GAG)	 AG	93763-93963	GT	AGG
(GAG)	 AG	94417-94545	GT	AGG
(GCT)	 AG	94653-94844	GT	TGG
(GAA)	 AG	94989-95063	GT	AGG
(GGA)	 AG	95936-96058	GG	GAG
-recovered pasa_asmbl_5451.p1, terminal, 95936, 96058
-recovered pasa_asmbl_5451.p1, internal, 85635, 85797
-recovered pasa_asmbl_5451.p1, internal, 86649, 86836
-recovered pasa_asmbl_5451.p1, internal, 87097, 87247
-recovered pasa_asmbl_5451.p1, internal, 88167, 88349
-recovered pasa_asmbl_5451.p1, internal, 89359, 89496
-recovered pasa_asmbl_5451.p1, internal, 90097, 90291
-recovered pasa_asmbl_5451.p1, internal, 90849, 91158
-recovered pasa_asmbl_5451.p1, internal, 91508, 91576
-recovered pasa_asmbl_5451.p1, internal, 92125, 92261
-recovered pasa_asmbl_5451.p1, internal, 93282, 93623
-recovered pasa_asmbl_5451.p1, internal, 93763, 93963
-recovered pasa_asmbl_5451.p1, internal, 94417, 94545
-recovered pasa_asmbl_5451.p1, internal, 94653, 94844
-recovered pasa_asmbl_5451.p1, internal, 94989, 95063
Valid prediction for snap_scaffold_11-snap.890-T1
Valid prediction for snap_scaffold_11-snap.887-T1
Couldn't classify 30189, 30317
Couldn't classify 36376, 36474
Sorry, prediction pasa_asmbl_5437.p1 fails validation.
(CTT)	 AC	30189-30317	GT	AGG
(GAG)	 AG	30409-30543	GT	AGG
(GCG)	 AG	31480-31673	GT	GGG
(GAA)	 AG	31874-31949	GT	AGG
(GTA)	 AG	32029-32135	GT	AGG
(ATA)	 AG	32220-32343	GT	AGG
(GCC)	 AG	32435-32725	GT	GGG
(GAC)	 AG	32910-33505	GT	AGG
(GCT)	 AG	33627-33782	GT	AGG
(GCG)	 AG	34036-34186	GT	AGG
(GTC)	 AG	34336-34494	GT	ATG
(GTG)	 AG	35895-36062	GT	GGG
(GAC)	 AG	36153-36254	GT	AGG
(GTG)	 AG	36376-36474	CT	ACC
-recovered pasa_asmbl_5437.p1, internal, 30409, 30543
-recovered pasa_asmbl_5437.p1, internal, 31480, 31673
-recovered pasa_asmbl_5437.p1, internal, 31874, 31949
-recovered pasa_asmbl_5437.p1, internal, 32029, 32135
-recovered pasa_asmbl_5437.p1, internal, 32220, 32343
-recovered pasa_asmbl_5437.p1, internal, 32435, 32725
-recovered pasa_asmbl_5437.p1, internal, 32910, 33505
-recovered pasa_asmbl_5437.p1, internal, 33627, 33782
-recovered pasa_asmbl_5437.p1, internal, 34036, 34186
-recovered pasa_asmbl_5437.p1, internal, 34336, 34494
-recovered pasa_asmbl_5437.p1, internal, 35895, 36062
-recovered pasa_asmbl_5437.p1, internal, 36153, 36254
Valid prediction for Augustus_model.g17765.t1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_11-snap.880-T1
Valid prediction for snap_scaffold_11-snap.886-T1
Valid prediction for CodingQuarry_transcript_8020-T1
Valid prediction for snap_scaffold_11-snap.883-T1
Valid prediction for Augustus_model.g17767.t1
Valid prediction for snap_scaffold_11-snap.888-T1
Valid prediction for HiQ_model.g17773.t1
Valid prediction for snap_scaffold_11-snap.863-T1
Valid prediction for HiQ_model.g17771.t1
Valid prediction for Augustus_model.g17768.t1
Valid prediction for GlimmerHMM_glimmerT_26848-T1
Valid prediction for snap_scaffold_11-snap.875-T1
Valid prediction for GlimmerHMM_glimmerT_26859-T1
Valid prediction for GlimmerHMM_glimmerT_26854-T1
Valid prediction for GlimmerHMM_glimmerT_26863-T1
Valid prediction for snap_scaffold_11-snap.872-T1
Valid prediction for GlimmerHMM_glimmerT_26856-T1
Valid prediction for GlimmerHMM_glimmerT_26857-T1
Couldn't classify 22586, 22841
Sorry, prediction pasa_asmbl_6557.p1 fails validation.
(GAC)	 CA	22586-22841	GT	CGG
(CTA)	 AG	23056-23116	GT	ACG
(GTG)	 AG	25399-25529	GT	AGG
(ACC)	 AG	25852-25971	GT	AGG
(CGG)	 AG	26376-26489	GT	AGG
(ACA)	 AG	26724-26837	GT	AGG
(ACG)	 AG	28559-28779	GT	AGG
(GTC)	 AG	28883-29033	GT	AGG
(TGA)	 AG	29180-29344	GT	GAG
(ATA)	 AG	29546-29659	GT	TGG
(ACG)	 AG	29793-29906	GT	CCG
(GTG)	 AG	30118-30231	GT	CGG
(CCA)	 AG	30464-30580	GT	AAG
(ACG)	 AG	30690-30717	GT	TGG
(CTA)	 AG	31700-31785	GT	CAG
(ACA)	 AG	32197-32310	GT	GTG
(TCA)	 AG	32659-32774	GT	AGG
(GTG)	 AG	32859-33116	GT	AAG
(GGC)	 AG	33275-33406	GT	TGG
(TCC)	 AG	34701-34860	GT	TGG
(ACT)	 AG	34970-35463	GC	GAG
add_exon() Sorry, pasa_asmbl_6557.p1 25852-25971-terminal-1 is invalid.
-recovered pasa_asmbl_6557.p1, terminal, 25852, 25971
-recovered pasa_asmbl_6557.p1, terminal, 26724, 26837
-recovered pasa_asmbl_6557.p1, terminal, 34970, 35463
-recovered pasa_asmbl_6557.p1, internal, 23056, 23116
-recovered pasa_asmbl_6557.p1, internal, 25399, 25529
-recovered pasa_asmbl_6557.p1, internal, 25852, 25971
-recovered pasa_asmbl_6557.p1, internal, 26376, 26489
-recovered pasa_asmbl_6557.p1, internal, 26724, 26837
-recovered pasa_asmbl_6557.p1, internal, 28559, 28779
-recovered pasa_asmbl_6557.p1, internal, 28883, 29033
-recovered pasa_asmbl_6557.p1, internal, 29180, 29344
-recovered pasa_asmbl_6557.p1, internal, 29546, 29659
-recovered pasa_asmbl_6557.p1, internal, 29793, 29906
-recovered pasa_asmbl_6557.p1, internal, 30118, 30231
-recovered pasa_asmbl_6557.p1, internal, 30464, 30580
-recovered pasa_asmbl_6557.p1, internal, 30690, 30717
-recovered pasa_asmbl_6557.p1, internal, 31700, 31785
-recovered pasa_asmbl_6557.p1, internal, 32197, 32310
-recovered pasa_asmbl_6557.p1, internal, 32659, 32774
-recovered pasa_asmbl_6557.p1, internal, 32859, 33116
-recovered pasa_asmbl_6557.p1, internal, 33275, 33406
-recovered pasa_asmbl_6557.p1, internal, 34701, 34860
-recovered pasa_asmbl_6557.p1, internal, 34970, 35463
Valid prediction for snap_scaffold_11-snap.881-T1
Valid prediction for GlimmerHMM_glimmerT_26858-T1
Valid prediction for GlimmerHMM_glimmerT_26860-T1
Valid prediction for snap_scaffold_11-snap.867-T1
Valid prediction for snap_scaffold_11-snap.882-T1
Valid prediction for GlimmerHMM_glimmerT_26849-T1
Valid prediction for GlimmerHMM_glimmerT_26865-T1
Valid prediction for HiQ_model.g17766.t1
Valid prediction for snap_scaffold_11-snap.868-T1
Valid prediction for Augustus_model.g17762.t1
Valid prediction for snap_scaffold_11-snap.859-T1
Valid prediction for snap_scaffold_11-snap.865-T1
Valid prediction for snap_scaffold_11-snap.862-T1
Valid prediction for GlimmerHMM_glimmerT_26862-T1
Valid prediction for snap_scaffold_11-snap.876-T1
Valid prediction for Augustus_model.g17772.t1
Valid prediction for Augustus_model.g17770.t1
Couldn't classify 73835, 74331
Sorry, prediction pasa_asmbl_6550.p1 fails validation.
(CCC)	 GA	73835-74331	GT	AGG
(CCC)	 AG	74609-74796	GT	AGG
(GGC)	 AG	75322-75438	GT	TGG
(GAG)	 AG	75621-75947	GT	TGG
(GCT)	 AG	76160-76298	GT	AGG
(GGA)	 AG	77452-77585	GT	CAG
(ACA)	 AG	78764-78947	GT	AGG
(TAA)	 AG	79282-79600	CT	AAC
-recovered pasa_asmbl_6550.p1, terminal, 79282, 79600
-recovered pasa_asmbl_6550.p1, internal, 74609, 74796
-recovered pasa_asmbl_6550.p1, internal, 75322, 75438
-recovered pasa_asmbl_6550.p1, internal, 75621, 75947
-recovered pasa_asmbl_6550.p1, internal, 76160, 76298
-recovered pasa_asmbl_6550.p1, internal, 77452, 77585
-recovered pasa_asmbl_6550.p1, internal, 78764, 78947
Couldn't classify 148336, 148821
Sorry, prediction pasa_asmbl_5436.p2 fails validation.
(GGA)	 TT	148336-148821	GG	GAG

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 41180, rend_intergenic: 26080  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 55003, rend_intergenic: 50653  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 77817, rend_intergenic: 64149  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 86201, rend_intergenic: 84113  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 87658, rend_intergenic: 86326  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 96146, rend_intergenic: 89995  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 104105, rend_intergenic: 100943  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 114050, rend_intergenic: 111076  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 129377, rend_intergenic: 124336  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 135706, rend_intergenic: 134819  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 137608, rend_intergenic: 136082  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 166803, rend_intergenic: 142591  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 177966
-exon list size: 497


building trellis

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55.3    
55.5    
55.7    
55.9    
56.1    
56.3    
56.5    
56.7    
56.9    
57.1    
57.3    
57.5    
57.7    
57.9    
58.1    
58.3    
58.5    
58.7    
58.9    
59.1    
59.3    
59.5    
59.7    
59.9    
60.1    
60.3    
60.5    
60.7    
60.9    
61.1    
61.3    
61.5    
61.7    
61.9    
62.1    
62.3    
62.5    
62.7    
62.9    
63.1    
63.3    
63.5    
63.7    
63.9    
64.1    
64.3    
64.5    
64.7    
64.9    
65.1    
65.3    
65.5    
65.7    
65.9    
66.1    
66.3    
66.5    
66.7    
66.9    
67.1    
67.3    
67.5    
67.7    
67.9    
68.1    
68.3    
68.5    
68.7    
68.9    
69.1    
69.3    
69.5    
69.7    
69.9    
70.1    
70.3    
70.5    
70.7    
70.9    
71.1    
71.3    
71.5    
71.7    
71.9    
72.1    
72.3    
72.5    
72.7    
72.9    
73.1    
73.3    
73.5    
73.7    
73.9    
74.1    
74.3    
74.5    
74.7    
74.9    
75.2    
75.4    
75.6    
75.8    
76.0    
76.2    
76.4    
76.6    
76.8    
77.0    
77.2    
77.4    
77.6    
77.8    
78.0    
78.2    
78.4    
78.6    
78.8    
79.0    
79.2    
79.4    
79.6    
79.8    
80.0    
80.2    
80.4    
80.6    
80.8    
81.0    
81.2    
81.4    
81.6    
81.8    
82.0    
82.2    
82.4    
82.6    
82.8    
83.0    
83.2    
83.4    
83.6    
83.8    
84.0    
84.2    
84.4    
84.6    
84.8    
85.0    
85.2    
85.4    
85.6    
85.8    
86.0    
86.2    
86.4    
86.6    
86.8    
87.0    
87.2    
87.4    
87.6    
87.8    
88.0    
88.2    
88.4    
88.6    
88.8    
89.0    
89.2    
89.4    
89.6    
89.8    
90.0    
90.2    
90.4    
90.6    
90.8    
91.0    
91.2    
91.4    
91.6    
91.8    
92.0    
92.2    
92.4    
92.6    
92.8    
93.0    
93.2    
93.4    
93.6    
93.8    
94.0    
94.2    
94.4    
94.6    
94.8    
95.0    
95.2    
95.4    
95.6    
95.8    
96.0    
96.2    
96.4    
96.6    
96.8    
97.0    
97.2    
97.4    
97.6    
97.8    
98.0    
98.2    
98.4    
98.6    
98.8    
99.0    
99.2    
99.4    
99.6    
99.8    
-found 18 predictions from path traversal
Error with prediction: snap lend_intergenic: 41180, rend_intergenic: 26080  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 55003, rend_intergenic: 50653  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 77817, rend_intergenic: 64149  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 86201, rend_intergenic: 84113  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 87658, rend_intergenic: 86326  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 96146, rend_intergenic: 89995  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 104105, rend_intergenic: 100943  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 114050, rend_intergenic: 111076  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 129377, rend_intergenic: 124336  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 135706, rend_intergenic: 134819  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 137608, rend_intergenic: 136082  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 166803, rend_intergenic: 142591  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 15 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 160345 - 177966
-exon list size: 10


building trellis

8.3    
16.7    
25.0    
33.3    
41.7    
50.0    
58.3    
66.7    
75.0    
83.3    
91.7    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 1 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 164651 - 177966
-exon list size: 4


building trellis

16.7    
33.3    
50.0    
66.7    
83.3    
-found 1 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support