-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_1098

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_1098-snap.1-T1
Sorry, intron length (4) is less than minimum required (10)
Couldn't classify 2118, 2267
Sorry, prediction GlimmerHMM_glimmerT_60963-T1 fails validation.
(ATG)	 CG	1126-1233	GT	GAG
(CTG)	 AG	2118-2267	GT	GGG
-recovered GlimmerHMM_glimmerT_60963-T1, initial, 1126, 1233
-recovered GlimmerHMM_glimmerT_60963-T1, internal, 2118, 2267
Valid prediction for snap_scaffold_1098-snap.2-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)
-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 3298
-exon list size: 11


building trellis

7.7    
15.4    
23.1    
30.8    
38.5    
46.2    
53.8    
61.5    
69.2    
76.9    
84.6    
92.3    
-found 1 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 1 predictions persist after filtering for low support