-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_1087

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 2510, 2857
Sorry, prediction Augustus_model.g40343.t1 fails validation.
(AGG)	 AG	2510-2857	GT	CGG
-recovered Augustus_model.g40343.t1, internal, 2510, 2857
Valid prediction for GlimmerHMM_glimmerT_60953-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GlimmerHMM_glimmerT_60952-T1
Couldn't classify 511, 795
Couldn't classify 828, 1308
Sorry, prediction snap_scaffold_1087-snap.1-T1 fails validation.
(GGT)	 AG	511-795	GT	AGG
(GGG)	 AG	828-1308	GT	AGG
-recovered snap_scaffold_1087-snap.1-T1, internal, 511, 795
-recovered snap_scaffold_1087-snap.1-T1, internal, 828, 1308

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 3327
-exon list size: 7


building trellis

11.1    
22.2    
33.3    
44.4    
55.6    
66.7    
77.8    
88.9    
-found 2 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 2 predictions persist after filtering for low support