-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_1085

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 125, 295
Couldn't classify 2865, 3053
Sorry, prediction snap_scaffold_1085-snap.2-T1 fails validation.
(GAG)	 AG	125-295	GT	AAG
(AGA)	 AG	2865-3053	GT	CTG
-recovered snap_scaffold_1085-snap.2-T1, internal, 125, 295
-recovered snap_scaffold_1085-snap.2-T1, internal, 2865, 3053

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 375, 457
Couldn't classify 3188, 3301
Sorry, prediction snap_scaffold_1085-snap.1-T1 fails validation.
(AGT)	 AG	375-457	GT	AGG
(CGC)	 AG	3188-3301	GT	AGG
-recovered snap_scaffold_1085-snap.1-T1, internal, 375, 457
-recovered snap_scaffold_1085-snap.1-T1, internal, 3188, 3301
Valid prediction for Augustus_model.g40341.t1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 2955, rend_intergenic: 125  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 3329
-exon list size: 6


building trellis

12.5    
25.0    
37.5    
50.0    
62.5    
75.0    
87.5    
-found 1 predictions from path traversal
Error with prediction: snap lend_intergenic: 2955, rend_intergenic: 125  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support