-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_104

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GlimmerHMM_glimmerT_59789-T1
Couldn't classify 192, 314
Couldn't classify 15319, 15476
Sorry, prediction snap_scaffold_104-snap.1-T1 fails validation.
(ACA)	 AG	192-314	GT	GAG
(ACC)	 AG	2203-2276	GT	CGG
(GGC)	 AG	3235-3667	GT	ATG
(CTC)	 AG	15319-15476	GT	AGG
-recovered snap_scaffold_104-snap.1-T1, internal, 192, 314
-recovered snap_scaffold_104-snap.1-T1, internal, 2203, 2276
-recovered snap_scaffold_104-snap.1-T1, internal, 3235, 3667
-recovered snap_scaffold_104-snap.1-T1, internal, 15319, 15476
Valid prediction for Augustus_model.g39616.t1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GlimmerHMM_glimmerT_59788-T1
Valid prediction for snap_scaffold_104-snap.2-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 15476, rend_intergenic: 1432  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 15568
-exon list size: 17


building trellis

5.3    
10.5    
15.8    
21.1    
26.3    
31.6    
36.8    
42.1    
47.4    
52.6    
57.9    
63.2    
68.4    
73.7    
78.9    
84.2    
89.5    
94.7    
-found 2 predictions from path traversal
Error with prediction: snap lend_intergenic: 15476, rend_intergenic: 1432  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 1 predictions persist after filtering for low support