-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_103

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_103-snap.1-T1
Valid prediction for GlimmerHMM_glimmerT_59787-T1
Valid prediction for Augustus_model.g39615.t1
Couldn't classify 6469, 6592
Couldn't classify 8611, 8710
Sorry, prediction pasa_asmbl_5235.p1 fails validation.
(GAT)	 TA	6469-6592	GT	AGG
(GCT)	 AG	6706-6806	GT	TTG
(ACC)	 AG	7017-7074	GT	AGG
(TGG)	 AG	7771-7854	GT	GGG
(GCA)	 AG	8256-8388	GT	AGG
(GTT)	 AG	8611-8710	GT	AGG
-recovered pasa_asmbl_5235.p1, terminal, 7017, 7074
-recovered pasa_asmbl_5235.p1, internal, 6706, 6806
-recovered pasa_asmbl_5235.p1, internal, 7017, 7074
-recovered pasa_asmbl_5235.p1, internal, 7771, 7854
-recovered pasa_asmbl_5235.p1, internal, 8256, 8388
-recovered pasa_asmbl_5235.p1, internal, 8611, 8710

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_103-snap.2-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 15683
-exon list size: 20


building trellis

4.5    
9.1    
13.6    
18.2    
22.7    
27.3    
31.8    
36.4    
40.9    
45.5    
50.0    
54.5    
59.1    
63.6    
68.2    
72.7    
77.3    
81.8    
86.4    
90.9    
95.5    
-found 1 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 1 predictions persist after filtering for low support