-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_10/scaffold_10_9353686-9557693

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 138821, 138907
Couldn't classify 139802, 139975
Sorry, prediction pasa_asmbl_3388.p1 fails validation.
(GAA)	 AG	138821-138907	GT	AGG
(GAA)	 AG	138985-139107	GT	AGG
(GAG)	 AG	139208-139415	GT	TGG
(GAG)	 AG	139547-139692	GT	AGG
(GTT)	 AG	139802-139975	GC	CCG
-recovered pasa_asmbl_3388.p1, internal, 138821, 138907
-recovered pasa_asmbl_3388.p1, internal, 138985, 139107
-recovered pasa_asmbl_3388.p1, internal, 139208, 139415
-recovered pasa_asmbl_3388.p1, internal, 139547, 139692
-recovered pasa_asmbl_3388.p1, internal, 139802, 139975
Valid prediction for Augustus_model.g16780.t1
Valid prediction for pasa_asmbl_3403.p1
Valid prediction for snap_scaffold_10-snap.1840-T1
Couldn't classify 123732, 123782
Sorry, prediction pasa_asmbl_3386.p1 fails validation.
(ATG)	 AA	121417-121514	GT	CAG
(GAA)	 AG	122816-122899	GT	AGG
(AAC)	 AG	123406-123526	GT	AAG
(GCG)	 AG	123732-123782	AT	AGA
-recovered pasa_asmbl_3386.p1, initial, 121417, 121514
-recovered pasa_asmbl_3386.p1, internal, 122816, 122899
-recovered pasa_asmbl_3386.p1, internal, 123406, 123526
Valid prediction for CodingQuarry_transcript_5538-T1
Couldn't classify 143119, 143241
Couldn't classify 143661, 143693
Sorry, prediction pasa_asmbl_3391.p1 fails validation.
(GCA)	 GA	143119-143241	GT	CGG
(TTG)	 AG	143370-143525	GT	TGG
(TCC)	 AG	143661-143693	CA	CCC
-recovered pasa_asmbl_3391.p1, internal, 143370, 143525
Valid prediction for GlimmerHMM_glimmerT_25213-T1
Valid prediction for GlimmerHMM_glimmerT_25210-T1
Valid prediction for snap_scaffold_10-snap.1841-T1
Valid prediction for Augustus_model.g16795.t1
Valid prediction for pasa_asmbl_3380.p1
Valid prediction for CodingQuarry_transcript_5529-T1
Valid prediction for snap_scaffold_10-snap.1838-T1
Valid prediction for snap_scaffold_10-snap.1855-T1
Valid prediction for Augustus_model.g16796.t1
Valid prediction for snap_scaffold_10-snap.1843-T1
Couldn't classify 200667, 200741
Sorry, prediction pasa_asmbl_3402.p1 fails validation.
(TGC)	 AG	200667-200741	GT	AGG
(GAA)	 AG	201128-201176	GT	AGG
(ACC)	 AG	201312-201428	GT	AGG
(GGA)	 AG	201689-201895	GT	AGG
(GAG)	 AG	203414-203550	CC	AAC
-recovered pasa_asmbl_3402.p1, terminal, 203414, 203550
-recovered pasa_asmbl_3402.p1, internal, 200667, 200741
-recovered pasa_asmbl_3402.p1, internal, 201128, 201176
-recovered pasa_asmbl_3402.p1, internal, 201312, 201428
-recovered pasa_asmbl_3402.p1, internal, 201689, 201895
Valid prediction for Augustus_model.g16793.t1
Couldn't classify 142724, 142857
Sorry, prediction pasa_asmbl_3389.p1 fails validation.
(ATG)	 AG	140190-140238	GT	CAG
(ACG)	 AG	140333-140517	GT	TGG
(GTG)	 AG	141453-141579	GT	GGG
(GCT)	 AG	141671-141774	GT	AGG
(GAG)	 AG	141935-142089	GT	CGG
(GTT)	 AG	142370-142509	GT	AGG
(GCA)	 AG	142724-142857	GA	AGG
-recovered pasa_asmbl_3389.p1, initial, 140190, 140238
-recovered pasa_asmbl_3389.p1, internal, 140190, 140238
-recovered pasa_asmbl_3389.p1, internal, 140333, 140517
-recovered pasa_asmbl_3389.p1, internal, 141453, 141579
-recovered pasa_asmbl_3389.p1, internal, 141671, 141774
-recovered pasa_asmbl_3389.p1, internal, 141935, 142089
-recovered pasa_asmbl_3389.p1, internal, 142370, 142509
Valid prediction for snap_scaffold_10-snap.1831-T1
Valid prediction for GlimmerHMM_glimmerT_25216-T1
Valid prediction for GlimmerHMM_glimmerT_25200-T1
Valid prediction for snap_scaffold_10-snap.1849-T1
Valid prediction for snap_scaffold_10-snap.1847-T1
Valid prediction for GlimmerHMM_glimmerT_25206-T1
Valid prediction for snap_scaffold_10-snap.1818-T1
Valid prediction for snap_scaffold_10-snap.1850-T1
Valid prediction for CodingQuarry_transcript_5534-T1
Valid prediction for HiQ_model.g16781.t1
Valid prediction for CodingQuarry_transcript_5537-T1
Valid prediction for CodingQuarry_transcript_5528-T1
Valid prediction for snap_scaffold_10-snap.1828-T1
Valid prediction for Augustus_model.g16783.t1
Valid prediction for CodingQuarry_transcript_5533-T1
Valid prediction for Augustus_model.g16792.t1
Valid prediction for pasa_asmbl_3373.p1
Couldn't classify 135302, 135439
Couldn't classify 136467, 136712
Sorry, prediction pasa_asmbl_3387.p1 fails validation.
(GCC)	 TA	135302-135439	GT	AGG
(GTG)	 AG	135701-135817	GT	AGG
(ATG)	 AG	136015-136137	GT	TGG
(GCC)	 AG	136467-136712	AC	AGA
-recovered pasa_asmbl_3387.p1, initial, 136015, 136137
-recovered pasa_asmbl_3387.p1, internal, 135701, 135817
-recovered pasa_asmbl_3387.p1, internal, 136015, 136137
Valid prediction for snap_scaffold_10-snap.1833-T1
Valid prediction for GlimmerHMM_glimmerT_25211-T1
Couldn't classify 65243, 65334
Sorry, prediction pasa_asmbl_3379.p1 fails validation.
(GCT)	 AC	65243-65334	GT	ACG
(CCT)	 AG	65635-65696	GT	AGG
(TGA)	 AG	65846-65959	GT	GAG
(GTA)	 AG	66106-66204	GT	TGG
(ATC)	 AG	66407-66585	AG	AGA
add_exon() Sorry, pasa_asmbl_3379.p1 65635-65696-terminal-2 is invalid.
-recovered pasa_asmbl_3379.p1, terminal, 65635, 65696
add_exon() Sorry, pasa_asmbl_3379.p1 65846-65959-terminal-1 is invalid.
-recovered pasa_asmbl_3379.p1, terminal, 65846, 65959
-recovered pasa_asmbl_3379.p1, terminal, 66407, 66585
-recovered pasa_asmbl_3379.p1, internal, 65635, 65696
-recovered pasa_asmbl_3379.p1, internal, 65846, 65959
-recovered pasa_asmbl_3379.p1, internal, 66106, 66204
Valid prediction for GlimmerHMM_glimmerT_25205-T1
Valid prediction for GlimmerHMM_glimmerT_25209-T1
Valid prediction for snap_scaffold_10-snap.1836-T1
Valid prediction for GlimmerHMM_glimmerT_25217-T1
Valid prediction for HiQ_model.g16777.t1
Valid prediction for CodingQuarry_transcript_5536-T1
Couldn't classify 111735, 111901
Sorry, prediction pasa_asmbl_3381.p1 fails validation.
(ACC)	 AG	111735-111901	GT	AGG
(AGA)	 AG	112029-112066	GT	CGG
(GAC)	 AG	112259-112348	GT	GGG
(CCC)	 AG	112507-112715	GT	AGG
(CTG)	 AG	115351-115488	GT	ATG
(CCA)	 AG	115721-115858	GT	AGG
(ATG)	 AG	116258-116389	GC	AGG
(GTC)	 AG	116958-117014	AC	AAA
-recovered pasa_asmbl_3381.p1, initial, 116258, 116389
-recovered pasa_asmbl_3381.p1, terminal, 116958, 117014
-recovered pasa_asmbl_3381.p1, internal, 111735, 111901
-recovered pasa_asmbl_3381.p1, internal, 112029, 112066
-recovered pasa_asmbl_3381.p1, internal, 112259, 112348
-recovered pasa_asmbl_3381.p1, internal, 112507, 112715
-recovered pasa_asmbl_3381.p1, internal, 115351, 115488
-recovered pasa_asmbl_3381.p1, internal, 115721, 115858
-recovered pasa_asmbl_3381.p1, internal, 116258, 116389
Valid prediction for GlimmerHMM_glimmerT_25218-T1
Valid prediction for Augustus_model.g16786.t1
Valid prediction for snap_scaffold_10-snap.1832-T1
Valid prediction for HiQ_model.g16797.t1
Valid prediction for Augustus_model.g16787.t1
Valid prediction for GlimmerHMM_glimmerT_25212-T1
Valid prediction for CodingQuarry_transcript_5535-T1
Valid prediction for snap_scaffold_10-snap.1835-T1
Couldn't classify 143817, 143896
Sorry, prediction pasa_asmbl_3392.p1 fails validation.
(GAC)	 GT	143817-143896	GT	CAG
(CTG)	 AG	144435-144549	GT	AGG
(ACA)	 AG	144741-144954	GT	CGG
(CGG)	 AG	145667-145871	GT	AGG
(GAT)	 AG	145982-146144	GT	AGG
(GTG)	 AG	146609-146769	GT	CTG
(CCT)	 AG	146874-147087	AG	GAA
-recovered pasa_asmbl_3392.p1, terminal, 146874, 147087
-recovered pasa_asmbl_3392.p1, internal, 144435, 144549
-recovered pasa_asmbl_3392.p1, internal, 144741, 144954
-recovered pasa_asmbl_3392.p1, internal, 145667, 145871
-recovered pasa_asmbl_3392.p1, internal, 145982, 146144
-recovered pasa_asmbl_3392.p1, internal, 146609, 146769
Valid prediction for snap_scaffold_10-snap.1822-T1
Valid prediction for GlimmerHMM_glimmerT_25222-T1
Valid prediction for CodingQuarry_transcript_5527-T1
Valid prediction for GlimmerHMM_glimmerT_25204-T1
Valid prediction for CodingQuarry_transcript_5526-T1
Valid prediction for Augustus_model.g16791.t1
Valid prediction for GlimmerHMM_glimmerT_25195-T1
Valid prediction for Augustus_model.g16788.t1
Valid prediction for GlimmerHMM_glimmerT_25202-T1
Couldn't classify 129661, 129735
Couldn't classify 130726, 130792
Sorry, prediction pasa_asmbl_3828.p1 fails validation.
(CTG)	 AC	129661-129735	GT	GGG
(CAC)	 AG	129966-130105	GT	CGG
(GTT)	 AG	130268-130331	GT	GGG
(CGG)	 AG	130524-130624	GT	AGG
(GTT)	 AG	130726-130792	GA	GGG
-recovered pasa_asmbl_3828.p1, internal, 129966, 130105
-recovered pasa_asmbl_3828.p1, internal, 130268, 130331
-recovered pasa_asmbl_3828.p1, internal, 130524, 130624
Valid prediction for snap_scaffold_10-snap.1829-T1
Valid prediction for Augustus_model.g16789.t1
Valid prediction for pasa_asmbl_3375.p1
Couldn't classify 62665, 62718
Sorry, prediction pasa_asmbl_3377.p1 fails validation.
(ATG)	 AG	58866-58950	GT	AGG
(ATG)	 AG	59285-59339	GT	AGG
(TGC)	 AG	59527-59596	GT	AGG
(CCG)	 AG	59882-60006	GT	ACG
(AAC)	 AG	60314-60378	GT	AGG
(TGG)	 AG	60628-60738	GT	AGG
(GAG)	 AG	60910-61040	GT	CCG
(GTG)	 AG	61198-61331	GT	AGG
(GTT)	 AG	61791-61844	GT	ACG
(TAA)	 AG	62459-62558	GT	AGG
(GTG)	 AG	62665-62718	CC	CCC
-recovered pasa_asmbl_3377.p1, initial, 58866, 58950
add_exon() Sorry, pasa_asmbl_3377.p1 59285-59339-initial-1 is invalid.
-recovered pasa_asmbl_3377.p1, initial, 59285, 59339
-recovered pasa_asmbl_3377.p1, internal, 58866, 58950
-recovered pasa_asmbl_3377.p1, internal, 59285, 59339
-recovered pasa_asmbl_3377.p1, internal, 59527, 59596
-recovered pasa_asmbl_3377.p1, internal, 59882, 60006
-recovered pasa_asmbl_3377.p1, internal, 60314, 60378
-recovered pasa_asmbl_3377.p1, internal, 60628, 60738
-recovered pasa_asmbl_3377.p1, internal, 60910, 61040
-recovered pasa_asmbl_3377.p1, internal, 61198, 61331
-recovered pasa_asmbl_3377.p1, internal, 61791, 61844
-recovered pasa_asmbl_3377.p1, internal, 62459, 62558
Valid prediction for GlimmerHMM_glimmerT_25221-T1
Valid prediction for GlimmerHMM_glimmerT_25220-T1
Valid prediction for GlimmerHMM_glimmerT_25199-T1
Valid prediction for snap_scaffold_10-snap.1825-T1
Valid prediction for GlimmerHMM_glimmerT_25215-T1
Valid prediction for GlimmerHMM_glimmerT_25196-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_10-snap.1817-T1
Valid prediction for snap_scaffold_10-snap.1851-T1
Valid prediction for Augustus_model.g16776.t1
Couldn't classify 201948, 201980
Couldn't classify 202909, 202957
Sorry, prediction pasa_asmbl_4689.p1 fails validation.
(GTC)	 CT	201948-201980	GT	AGG
(ATC)	 AG	202268-202405	GT	AGG
(TGC)	 AG	202502-202695	GT	AGG
(CAA)	 AG	202909-202957	GA	AGG
-recovered pasa_asmbl_4689.p1, internal, 202268, 202405
-recovered pasa_asmbl_4689.p1, internal, 202502, 202695
Valid prediction for snap_scaffold_10-snap.1820-T1
Valid prediction for HiQ_model.g16784.t1
Valid prediction for snap_scaffold_10-snap.1823-T1
Valid prediction for Augustus_model.g16778.t1
Valid prediction for snap_scaffold_10-snap.1846-T1
Valid prediction for Augustus_model.g16782.t1
Valid prediction for pasa_asmbl_4693.p2
Valid prediction for Augustus_model.g16790.t1
Valid prediction for snap_scaffold_10-snap.1827-T1
Valid prediction for pasa_asmbl_4694.p1
Valid prediction for GlimmerHMM_glimmerT_25198-T1
Valid prediction for snap_scaffold_10-snap.1837-T1
Valid prediction for GlimmerHMM_glimmerT_25194-T1
Valid prediction for GlimmerHMM_glimmerT_25208-T1
Valid prediction for snap_scaffold_10-snap.1848-T1
Valid prediction for GlimmerHMM_glimmerT_25197-T1
Valid prediction for snap_scaffold_10-snap.1854-T1
Valid prediction for GlimmerHMM_glimmerT_25207-T1
Valid prediction for Augustus_model.g16779.t1
Valid prediction for snap_scaffold_10-snap.1839-T1
Valid prediction for HiQ_model.g16785.t1
Valid prediction for snap_scaffold_10-snap.1852-T1
Valid prediction for GlimmerHMM_glimmerT_25219-T1
Valid prediction for snap_scaffold_10-snap.1842-T1
Valid prediction for CodingQuarry_transcript_5532-T1
Valid prediction for snap_scaffold_10-snap.1844-T1
Valid prediction for GlimmerHMM_glimmerT_25214-T1
Valid prediction for CodingQuarry_transcript_5530-T1
Valid prediction for snap_scaffold_10-snap.1834-T1
Valid prediction for snap_scaffold_10-snap.1830-T1
Valid prediction for snap_scaffold_10-snap.1845-T1
Valid prediction for GlimmerHMM_glimmerT_25201-T1
Valid prediction for snap_scaffold_10-snap.1819-T1
Valid prediction for GlimmerHMM_glimmerT_25203-T1
Valid prediction for snap_scaffold_10-snap.1826-T1
Valid prediction for CodingQuarry_transcript_5531-T1
Couldn't classify 177972, 178080
Couldn't classify 178527, 178631
Sorry, prediction pasa_asmbl_4691.p1 fails validation.
(CAG)	 AG	177972-178080	GT	TGG
(AGG)	 AG	178199-178392	GT	AGG
(GAG)	 AG	178527-178631	CA	AGC
-recovered pasa_asmbl_4691.p1, internal, 177972, 178080
-recovered pasa_asmbl_4691.p1, internal, 178199, 178392
Valid prediction for snap_scaffold_10-snap.1821-T1
Couldn't classify 199202, 199305
Couldn't classify 199963, 200127
Sorry, prediction pasa_asmbl_5091.p1 fails validation.
(ATC)	 CG	199202-199305	GT	AAG
(ATA)	 AG	199582-199696	GT	AGG
(GAC)	 AG	199963-200127	TA	ACT
-recovered pasa_asmbl_5091.p1, internal, 199582, 199696
Valid prediction for Augustus_model.g16794.t1
Valid prediction for snap_scaffold_10-snap.1853-T1
Valid prediction for snap_scaffold_10-snap.1824-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 22149, rend_intergenic: 13131  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 29349, rend_intergenic: 26850  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 44820, rend_intergenic: 38863  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 54732, rend_intergenic: 51257  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 65338, rend_intergenic: 60599  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 106806, rend_intergenic: 95642  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 108633, rend_intergenic: 108170  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 116226, rend_intergenic: 108890  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 147737, rend_intergenic: 121784  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 158732, rend_intergenic: 153894  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 162536, rend_intergenic: 159207  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 200583, rend_intergenic: 173635  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 204008
-exon list size: 641


building trellis

0.2    
0.3    
0.5    
0.6    
0.8    
0.9    
1.1    
1.2    
1.4    
1.6    
1.7    
1.9    
2.0    
2.2    
2.3    
2.5    
2.6    
2.8    
3.0    
3.1    
3.3    
3.4    
3.6    
3.7    
3.9    
4.0    
4.2    
4.4    
4.5    
4.7    
4.8    
5.0    
5.1    
5.3    
5.4    
5.6    
5.8    
5.9    
6.1    
6.2    
6.4    
6.5    
6.7    
6.8    
7.0    
7.2    
7.3    
7.5    
7.6    
7.8    
7.9    
8.1    
8.2    
8.4    
8.6    
8.7    
8.9    
9.0    
9.2    
9.3    
9.5    
9.6    
9.8    
10.0    
10.1    
10.3    
10.4    
10.6    
10.7    
10.9    
11.0    
11.2    
11.4    
11.5    
11.7    
11.8    
12.0    
12.1    
12.3    
12.4    
12.6    
12.8    
12.9    
13.1    
13.2    
13.4    
13.5    
13.7    
13.8    
14.0    
14.2    
14.3    
14.5    
14.6    
14.8    
14.9    
15.1    
15.2    
15.4    
15.6    
15.7    
15.9    
16.0    
16.2    
16.3    
16.5    
16.6    
16.8    
17.0    
17.1    
17.3    
17.4    
17.6    
17.7    
17.9    
18.0    
18.2    
18.4    
18.5    
18.7    
18.8    
19.0    
19.1    
19.3    
19.4    
19.6    
19.8    
19.9    
20.1    
20.2    
20.4    
20.5    
20.7    
20.8    
21.0    
21.2    
21.3    
21.5    
21.6    
21.8    
21.9    
22.1    
22.2    
22.4    
22.6    
22.7    
22.9    
23.0    
23.2    
23.3    
23.5    
23.6    
23.8    
24.0    
24.1    
24.3    
24.4    
24.6    
24.7    
24.9    
25.0    
25.2    
25.3    
25.5    
25.7    
25.8    
26.0    
26.1    
26.3    
26.4    
26.6    
26.7    
26.9    
27.1    
27.2    
27.4    
27.5    
27.7    
27.8    
28.0    
28.1    
28.3    
28.5    
28.6    
28.8    
28.9    
29.1    
29.2    
29.4    
29.5    
29.7    
29.9    
30.0    
30.2    
30.3    
30.5    
30.6    
30.8    
30.9    
31.1    
31.3    
31.4    
31.6    
31.7    
31.9    
32.0    
32.2    
32.3    
32.5    
32.7    
32.8    
33.0    
33.1    
33.3    
33.4    
33.6    
33.7    
33.9    
34.1    
34.2    
34.4    
34.5    
34.7    
34.8    
35.0    
35.1    
35.3    
35.5    
35.6    
35.8    
35.9    
36.1    
36.2    
36.4    
36.5    
36.7    
36.9    
37.0    
37.2    
37.3    
37.5    
37.6    
37.8    
37.9    
38.1    
38.3    
38.4    
38.6    
38.7    
38.9    
39.0    
39.2    
39.3    
39.5    
39.7    
39.8    
40.0    
40.1    
40.3    
40.4    
40.6    
40.7    
40.9    
41.1    
41.2    
41.4    
41.5    
41.7    
41.8    
42.0    
42.1    
42.3    
42.5    
42.6    
42.8    
42.9    
43.1    
43.2    
43.4    
43.5    
43.7    
43.9    
44.0    
44.2    
44.3    
44.5    
44.6    
44.8    
44.9    
45.1    
45.3    
45.4    
45.6    
45.7    
45.9    
46.0    
46.2    
46.3    
46.5    
46.7    
46.8    
47.0    
47.1    
47.3    
47.4    
47.6    
47.7    
47.9    
48.1    
48.2    
48.4    
48.5    
48.7    
48.8    
49.0    
49.1    
49.3    
49.5    
49.6    
49.8    
49.9    
50.1    
50.2    
50.4    
50.5    
50.7    
50.9    
51.0    
51.2    
51.3    
51.5    
51.6    
51.8    
51.9    
52.1    
52.3    
52.4    
52.6    
52.7    
52.9    
53.0    
53.2    
53.3    
53.5    
53.7    
53.8    
54.0    
54.1    
54.3    
54.4    
54.6    
54.7    
54.9    
55.1    
55.2    
55.4    
55.5    
55.7    
55.8    
56.0    
56.1    
56.3    
56.5    
56.6    
56.8    
56.9    
57.1    
57.2    
57.4    
57.5    
57.7    
57.9    
58.0    
58.2    
58.3    
58.5    
58.6    
58.8    
58.9    
59.1    
59.3    
59.4    
59.6    
59.7    
59.9    
60.0    
60.2    
60.3    
60.5    
60.7    
60.8    
61.0    
61.1    
61.3    
61.4    
61.6    
61.7    
61.9    
62.1    
62.2    
62.4    
62.5    
62.7    
62.8    
63.0    
63.1    
63.3    
63.5    
63.6    
63.8    
63.9    
64.1    
64.2    
64.4    
64.5    
64.7    
64.9    
65.0    
65.2    
65.3    
65.5    
65.6    
65.8    
65.9    
66.1    
66.3    
66.4    
66.6    
66.7    
66.9    
67.0    
67.2    
67.3    
67.5    
67.7    
67.8    
68.0    
68.1    
68.3    
68.4    
68.6    
68.7    
68.9    
69.1    
69.2    
69.4    
69.5    
69.7    
69.8    
70.0    
70.1    
70.3    
70.5    
70.6    
70.8    
70.9    
71.1    
71.2    
71.4    
71.5    
71.7    
71.9    
72.0    
72.2    
72.3    
72.5    
72.6    
72.8    
72.9    
73.1    
73.3    
73.4    
73.6    
73.7    
73.9    
74.0    
74.2    
74.3    
74.5    
74.7    
74.8    
75.0    
75.1    
75.3    
75.4    
75.6    
75.7    
75.9    
76.0    
76.2    
76.4    
76.5    
76.7    
76.8    
77.0    
77.1    
77.3    
77.4    
77.6    
77.8    
77.9    
78.1    
78.2    
78.4    
78.5    
78.7    
78.8    
79.0    
79.2    
79.3    
79.5    
79.6    
79.8    
79.9    
80.1    
80.2    
80.4    
80.6    
80.7    
80.9    
81.0    
81.2    
81.3    
81.5    
81.6    
81.8    
82.0    
82.1    
82.3    
82.4    
82.6    
82.7    
82.9    
83.0    
83.2    
83.4    
83.5    
83.7    
83.8    
84.0    
84.1    
84.3    
84.4    
84.6    
84.8    
84.9    
85.1    
85.2    
85.4    
85.5    
85.7    
85.8    
86.0    
86.2    
86.3    
86.5    
86.6    
86.8    
86.9    
87.1    
87.2    
87.4    
87.6    
87.7    
87.9    
88.0    
88.2    
88.3    
88.5    
88.6    
88.8    
89.0    
89.1    
89.3    
89.4    
89.6    
89.7    
89.9    
90.0    
90.2    
90.4    
90.5    
90.7    
90.8    
91.0    
91.1    
91.3    
91.4    
91.6    
91.8    
91.9    
92.1    
92.2    
92.4    
92.5    
92.7    
92.8    
93.0    
93.2    
93.3    
93.5    
93.6    
93.8    
93.9    
94.1    
94.2    
94.4    
94.6    
94.7    
94.9    
95.0    
95.2    
95.3    
95.5    
95.6    
95.8    
96.0    
96.1    
96.3    
96.4    
96.6    
96.7    
96.9    
97.0    
97.2    
97.4    
97.5    
97.7    
97.8    
98.0    
98.1    
98.3    
98.4    
98.6    
98.8    
98.9    
99.1    
99.2    
99.4    
99.5    
99.7    
99.8    
-found 28 predictions from path traversal
Error with prediction: snap lend_intergenic: 22149, rend_intergenic: 13131  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 29349, rend_intergenic: 26850  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 44820, rend_intergenic: 38863  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 54732, rend_intergenic: 51257  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 65338, rend_intergenic: 60599  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 106806, rend_intergenic: 95642  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 108633, rend_intergenic: 108170  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 116226, rend_intergenic: 108890  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 147737, rend_intergenic: 121784  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 158732, rend_intergenic: 153894  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 162536, rend_intergenic: 159207  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 200583, rend_intergenic: 173635  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 27 predictions persist after filtering for low support