-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_10/scaffold_10_6480319-6704553 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for Augustus_model.g16575.t1 Valid prediction for HiQ_model.g16587.t1 Valid prediction for GlimmerHMM_glimmerT_24890-T1 Valid prediction for Augustus_model.g16583.t1 Valid prediction for GlimmerHMM_glimmerT_24905-T1 Valid prediction for snap_scaffold_10-snap.1370-T1 Valid prediction for snap_scaffold_10-snap.1350-T1 Valid prediction for snap_scaffold_10-snap.1376-T1 Valid prediction for snap_scaffold_10-snap.1347-T1 Sorry, intron length (4) is less than minimum required (10) Valid prediction for pasa_asmbl_3245.p1 Valid prediction for snap_scaffold_10-snap.1365-T1 Couldn't classify 143906, 143984 Sorry, prediction pasa_asmbl_3244.p1 fails validation. (CGA) GT 143906-143984 GT CGG (TTC) AG 144179-144282 GT TGG (GTT) AG 144365-144441 GT AGG (GTA) AG 144602-144687 GT AGG (GGG) AG 144880-144935 GT AGG (GTG) AG 145033-145177 GT AGG (GCC) AG 145305-145415 GT CTG (TGC) AG 145552-145648 GT GGG (GTA) AG 146072-146202 GT TTG (TCG) AG 146285-146366 GT AGG (GGT) AG 146459-146590 GT AAG (GAT) AG 146730-146895 GG AGG -recovered pasa_asmbl_3244.p1, terminal, 146730, 146895 -recovered pasa_asmbl_3244.p1, internal, 144179, 144282 -recovered pasa_asmbl_3244.p1, internal, 144365, 144441 -recovered pasa_asmbl_3244.p1, internal, 144602, 144687 -recovered pasa_asmbl_3244.p1, internal, 144880, 144935 -recovered pasa_asmbl_3244.p1, internal, 145033, 145177 -recovered pasa_asmbl_3244.p1, internal, 145305, 145415 -recovered pasa_asmbl_3244.p1, internal, 145552, 145648 -recovered pasa_asmbl_3244.p1, internal, 146072, 146202 -recovered pasa_asmbl_3244.p1, internal, 146285, 146366 -recovered pasa_asmbl_3244.p1, internal, 146459, 146590 Valid prediction for GlimmerHMM_glimmerT_24900-T1 Valid prediction for HiQ_model.g16588.t1 Valid prediction for GlimmerHMM_glimmerT_24910-T1 Valid prediction for GlimmerHMM_glimmerT_24895-T1 Valid prediction for GlimmerHMM_glimmerT_24898-T1 Valid prediction for CodingQuarry_transcript_5446-T1 Valid prediction for Augustus_model.g16576.t1 Valid prediction for snap_scaffold_10-snap.1354-T1 Valid prediction for Augustus_model.g16574.t1 Valid prediction for snap_scaffold_10-snap.1377-T1 Couldn't classify 136010, 136097 Sorry, prediction pasa_asmbl_3241.p1 fails validation. (ATG) AG 134760-134932 GT CAG (AGT) AG 135363-135496 GT AGG (GTC) AG 135599-135671 GT AGG (GGG) AG 135757-135873 GT ACG (AGG) AG 136010-136097 GG TTG -recovered pasa_asmbl_3241.p1, initial, 134760, 134932 -recovered pasa_asmbl_3241.p1, internal, 134760, 134932 -recovered pasa_asmbl_3241.p1, internal, 135363, 135496 -recovered pasa_asmbl_3241.p1, internal, 135599, 135671 -recovered pasa_asmbl_3241.p1, internal, 135757, 135873 Valid prediction for snap_scaffold_10-snap.1359-T1 Valid prediction for snap_scaffold_10-snap.1362-T1 Valid prediction for Augustus_model.g16573.t1 Valid prediction for Augustus_model.g16580.t1 Valid prediction for GlimmerHMM_glimmerT_24894-T1 Valid prediction for CodingQuarry_transcript_5444-T1 Valid prediction for snap_scaffold_10-snap.1357-T1 Valid prediction for Augustus_model.g16579.t1 Valid prediction for snap_scaffold_10-snap.1375-T1 Valid prediction for snap_scaffold_10-snap.1366-T1 Couldn't classify 161006, 161201 Sorry, prediction pasa_asmbl_3246.p1 fails validation. (ACT) AG 161006-161201 GT AGG (GGA) AG 161364-161496 GT ATG (AGC) AG 161599-161685 GT AAG (AAC) AG 161815-161830 AG AAA -recovered pasa_asmbl_3246.p1, terminal, 161815, 161830 -recovered pasa_asmbl_3246.p1, internal, 161006, 161201 -recovered pasa_asmbl_3246.p1, internal, 161364, 161496 -recovered pasa_asmbl_3246.p1, internal, 161599, 161685 Valid prediction for snap_scaffold_10-snap.1352-T1 Valid prediction for GlimmerHMM_glimmerT_24909-T1 Valid prediction for snap_scaffold_10-snap.1379-T1 Valid prediction for GlimmerHMM_glimmerT_24899-T1 Valid prediction for GlimmerHMM_glimmerT_24907-T1 Valid prediction for HiQ_model.g16585.t1 Valid prediction for CodingQuarry_transcript_5445-T1 Valid prediction for snap_scaffold_10-snap.1368-T1 Valid prediction for snap_scaffold_10-snap.1373-T1 Valid prediction for Augustus_model.g16589.t1 Valid prediction for GlimmerHMM_glimmerT_24912-T1 Valid prediction for GlimmerHMM_glimmerT_24892-T1 Valid prediction for snap_scaffold_10-snap.1383-T1 Valid prediction for snap_scaffold_10-snap.1371-T1 Valid prediction for snap_scaffold_10-snap.1386-T1 Valid prediction for snap_scaffold_10-snap.1364-T1 -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_10-snap.1385-T1 Couldn't classify 213645, 214151 Sorry, prediction pasa_asmbl_4470.p1 fails validation. (ATG) CC 213645-214151 AC TGA Valid prediction for Augustus_model.g16581.t1 Valid prediction for CodingQuarry_transcript_5451-T1 Valid prediction for CodingQuarry_transcript_5447-T1 Valid prediction for snap_scaffold_10-snap.1360-T1 Valid prediction for HiQ_model.g16582.t1 Valid prediction for Augustus_model.g16577.t1 Valid prediction for GlimmerHMM_glimmerT_24902-T1 Valid prediction for CodingQuarry_transcript_5450-T1 Valid prediction for snap_scaffold_10-snap.1361-T1 Valid prediction for GlimmerHMM_glimmerT_24893-T1 Valid prediction for snap_scaffold_10-snap.1367-T1 Valid prediction for GlimmerHMM_glimmerT_24904-T1 Valid prediction for snap_scaffold_10-snap.1363-T1 Valid prediction for GlimmerHMM_glimmerT_24908-T1 Valid prediction for Augustus_model.g16570.t1 Couldn't classify 3832, 3864 Sorry, prediction pasa_asmbl_5160.p1 fails validation. (ATG) AA 2939-3001 GT AGG (GTG) AG 3370-3495 GT AAG (ATC) AG 3613-3735 GT AGG (GAG) AG 3832-3864 GT AGG -recovered pasa_asmbl_5160.p1, initial, 2939, 3001 -recovered pasa_asmbl_5160.p1, internal, 3370, 3495 -recovered pasa_asmbl_5160.p1, internal, 3613, 3735 -recovered pasa_asmbl_5160.p1, internal, 3832, 3864 Valid prediction for GlimmerHMM_glimmerT_24897-T1 Valid prediction for CodingQuarry_transcript_5448-T1 Valid prediction for GlimmerHMM_glimmerT_24889-T1 Valid prediction for Augustus_model.g16568.t1 Valid prediction for snap_scaffold_10-snap.1348-T1 Couldn't classify 31293, 31313 Sorry, prediction pasa_asmbl_4489.p2 fails validation. (GCC) CG 31293-31313 GT TGG (GCT) AG 31448-31539 GT AGG (AGC) AG 31983-32172 CA AGC -recovered pasa_asmbl_4489.p2, terminal, 31983, 32172 -recovered pasa_asmbl_4489.p2, internal, 31448, 31539 Valid prediction for snap_scaffold_10-snap.1369-T1 Valid prediction for GlimmerHMM_glimmerT_24913-T1 Valid prediction for GlimmerHMM_glimmerT_24896-T1 Valid prediction for Augustus_model.g16591.t1 Valid prediction for CodingQuarry_transcript_5449-T1 Valid prediction for Augustus_model.g16586.t1 Valid prediction for snap_scaffold_10-snap.1349-T1 Valid prediction for snap_scaffold_10-snap.1384-T1 Couldn't classify 91617, 91646 Couldn't classify 93918, 93923 Sorry, prediction pasa_asmbl_4481.p1 fails validation. (GCT) CA 91617-91646 GT AGG (GCA) AG 91732-91826 GT AGG (GGT) AG 91994-92105 GT AGG (TGT) AG 92375-92455 GT GGG (TTC) AG 92604-92726 GT AGG (GAC) AG 92825-92948 GT AGG (TCC) AG 93057-93160 GT TTG (GAG) AG 93339-93401 GT AGG (GCT) AG 93492-93568 GT GGG (CTG) AG 93674-93740 GT AAG (ACC) AG 93918-93923 GT CTG -recovered pasa_asmbl_4481.p1, internal, 91732, 91826 -recovered pasa_asmbl_4481.p1, internal, 91994, 92105 -recovered pasa_asmbl_4481.p1, internal, 92375, 92455 -recovered pasa_asmbl_4481.p1, internal, 92604, 92726 -recovered pasa_asmbl_4481.p1, internal, 92825, 92948 -recovered pasa_asmbl_4481.p1, internal, 93057, 93160 -recovered pasa_asmbl_4481.p1, internal, 93339, 93401 -recovered pasa_asmbl_4481.p1, internal, 93492, 93568 -recovered pasa_asmbl_4481.p1, internal, 93674, 93740 -recovered pasa_asmbl_4481.p1, internal, 93918, 93923 Couldn't classify 203948, 204037 Sorry, prediction pasa_asmbl_4473.p1 fails validation. (CCA) AG 203948-204037 GT ATG (GAC) AG 204123-204240 GT AGG (AGC) AG 204427-205079 GG AGG -recovered pasa_asmbl_4473.p1, terminal, 204427, 205079 -recovered pasa_asmbl_4473.p1, internal, 203948, 204037 -recovered pasa_asmbl_4473.p1, internal, 204123, 204240 Valid prediction for snap_scaffold_10-snap.1380-T1 Couldn't classify 178243, 178464 Sorry, prediction pasa_asmbl_4475.p1 fails validation. (ATG) CG 177680-178150 GT AGG (AAG) AG 178243-178464 GG GTG -recovered pasa_asmbl_4475.p1, initial, 177680, 178150 Valid prediction for GlimmerHMM_glimmerT_24887-T1 Valid prediction for pasa_asmbl_4487.p1 Valid prediction for Augustus_model.g16578.t1 Valid prediction for snap_scaffold_10-snap.1353-T1 Valid prediction for Augustus_model.g16572.t1 Valid prediction for GlimmerHMM_glimmerT_24901-T1 Valid prediction for Augustus_model.g16569.t1 Couldn't classify 209646, 209766 Sorry, prediction pasa_asmbl_4472.p1 fails validation. (ATG) AG 209085-209246 GT TGG (ACA) AG 209429-209526 GT AGG (TGG) AG 209646-209766 AG CCA -recovered pasa_asmbl_4472.p1, initial, 209085, 209246 -recovered pasa_asmbl_4472.p1, internal, 209085, 209246 -recovered pasa_asmbl_4472.p1, internal, 209429, 209526 Couldn't classify 192827, 192862 Couldn't classify 196089, 196124 Sorry, prediction pasa_asmbl_4474.p1 fails validation. (GGT) TA 192827-192862 GT AGG (GCC) AG 193903-194034 GT GGG (AAG) AG 194287-194457 GT ACG (GCC) AG 196089-196124 GT CGG -recovered pasa_asmbl_4474.p1, internal, 193903, 194034 -recovered pasa_asmbl_4474.p1, internal, 194287, 194457 -recovered pasa_asmbl_4474.p1, internal, 196089, 196124 Couldn't classify 12624, 12699 Couldn't classify 13998, 14847 Sorry, prediction pasa_asmbl_4491.p1 fails validation. (GAT) TG 12624-12699 GT AGG (AGC) AG 12870-13001 GT CGG (AGG) AG 13309-13449 GT AGG (TGT) AG 13654-13864 GT CAG (TGA) AG 13998-14847 CC AAC -recovered pasa_asmbl_4491.p1, internal, 12870, 13001 -recovered pasa_asmbl_4491.p1, internal, 13309, 13449 -recovered pasa_asmbl_4491.p1, internal, 13654, 13864 Valid prediction for Augustus_model.g16590.t1 Couldn't classify 94017, 94061 Sorry, prediction pasa_asmbl_4480.p1 fails validation. (GTT) AG 94017-94061 GT GGG (TTC) AG 94188-94255 GT AGG (GGG) AG 94354-94432 GT TGG (GTG) AG 94550-94630 GT AGG (GTG) AG 94774-94851 GT AGG (AAA) AG 94986-95167 GT AGG (TCG) AG 95288-95393 GT ATG (AGG) AG 95516-95605 GT AGG (TTT) AG 95692-95772 GT AGG (AGG) AG 95875-96003 GT AGG (GCG) AG 96134-96185 GT CAG (GTT) AG 96409-96472 GT TTG (GCA) AG 96559-96628 GT AGG (GAT) AG 96751-96822 GT AGG (CGC) AG 96915-97038 GT AGG (AGA) AG 97473-97666 GT TGG (GTG) AG 97892-98019 GT AGG (GGA) AG 98107-98194 GT AGG (GAG) AG 98288-98382 GT ACG (GAT) AG 98633-98744 CC GAC -recovered pasa_asmbl_4480.p1, terminal, 98633, 98744 -recovered pasa_asmbl_4480.p1, internal, 94017, 94061 -recovered pasa_asmbl_4480.p1, internal, 94188, 94255 -recovered pasa_asmbl_4480.p1, internal, 94354, 94432 -recovered pasa_asmbl_4480.p1, internal, 94550, 94630 -recovered pasa_asmbl_4480.p1, internal, 94774, 94851 -recovered pasa_asmbl_4480.p1, internal, 94986, 95167 -recovered pasa_asmbl_4480.p1, internal, 95288, 95393 -recovered pasa_asmbl_4480.p1, internal, 95516, 95605 -recovered pasa_asmbl_4480.p1, internal, 95692, 95772 -recovered pasa_asmbl_4480.p1, internal, 95875, 96003 -recovered pasa_asmbl_4480.p1, internal, 96134, 96185 -recovered pasa_asmbl_4480.p1, internal, 96409, 96472 -recovered pasa_asmbl_4480.p1, internal, 96559, 96628 -recovered pasa_asmbl_4480.p1, internal, 96751, 96822 -recovered pasa_asmbl_4480.p1, internal, 96915, 97038 -recovered pasa_asmbl_4480.p1, internal, 97473, 97666 -recovered pasa_asmbl_4480.p1, internal, 97892, 98019 -recovered pasa_asmbl_4480.p1, internal, 98107, 98194 -recovered pasa_asmbl_4480.p1, internal, 98288, 98382 Valid prediction for snap_scaffold_10-snap.1374-T1 Valid prediction for snap_scaffold_10-snap.1372-T1 Valid prediction for snap_scaffold_10-snap.1356-T1 Valid prediction for snap_scaffold_10-snap.1351-T1 Couldn't classify 23617, 24909 Sorry, prediction pasa_asmbl_4490.p1 fails validation. (ATG) CA 23617-24909 CA CAC Valid prediction for GlimmerHMM_glimmerT_24888-T1 Valid prediction for GlimmerHMM_glimmerT_24906-T1 Valid prediction for snap_scaffold_10-snap.1355-T1 Couldn't classify 101382, 101429 Sorry, prediction pasa_asmbl_4478.p1 fails validation. (TGC) GT 101382-101429 GT TGG (GCT) AG 102539-102682 GT AGG (AAC) AG 102958-103047 GT TGG (CCT) AG 103354-103478 GT AGG (TGC) AG 103911-104016 GT AGG (GGG) AG 104144-104254 GT GGG (GTG) AG 104340-105301 GT AAG (GAA) AG 105488-105584 GT AGG (ACA) AG 106273-106342 GT GGG (GTC) AG 106502-106580 GT AGG (GGT) AG 106679-106829 GT AGG (ACT) AG 107033-107240 GT AGG (GTA) AG 107391-107614 TG GAT -recovered pasa_asmbl_4478.p1, terminal, 107391, 107614 -recovered pasa_asmbl_4478.p1, internal, 102539, 102682 -recovered pasa_asmbl_4478.p1, internal, 102958, 103047 -recovered pasa_asmbl_4478.p1, internal, 103354, 103478 -recovered pasa_asmbl_4478.p1, internal, 103911, 104016 -recovered pasa_asmbl_4478.p1, internal, 104144, 104254 -recovered pasa_asmbl_4478.p1, internal, 104340, 105301 -recovered pasa_asmbl_4478.p1, internal, 105488, 105584 -recovered pasa_asmbl_4478.p1, internal, 106273, 106342 -recovered pasa_asmbl_4478.p1, internal, 106502, 106580 -recovered pasa_asmbl_4478.p1, internal, 106679, 106829 -recovered pasa_asmbl_4478.p1, internal, 107033, 107240 Valid prediction for GlimmerHMM_glimmerT_24911-T1 Couldn't classify 82842, 82895 Couldn't classify 83024, 83401 Sorry, prediction pasa_asmbl_4485.p1 fails validation. (ATC) CA 82842-82895 GT AGG (GTG) AG 83024-83401 AC CGA Couldn't classify 209929, 210061 Sorry, prediction pasa_asmbl_4471.p1 fails validation. (TTG) TC 209929-210061 GT AGG (GCT) AG 210406-210535 GT GAG (GTA) AG 210636-210828 GT CTG (GTT) AG 210953-211086 GT AGG (TGA) AG 211180-211282 CA GAC -recovered pasa_asmbl_4471.p1, terminal, 211180, 211282 -recovered pasa_asmbl_4471.p1, internal, 210406, 210535 -recovered pasa_asmbl_4471.p1, internal, 210636, 210828 -recovered pasa_asmbl_4471.p1, internal, 210953, 211086 Valid prediction for snap_scaffold_10-snap.1382-T1 Valid prediction for snap_scaffold_10-snap.1358-T1 Valid prediction for snap_scaffold_10-snap.1381-T1 Valid prediction for GlimmerHMM_glimmerT_24903-T1 Valid prediction for snap_scaffold_10-snap.1378-T1 Valid prediction for Augustus_model.g16584.t1 Valid prediction for Augustus_model.g16571.t1 Valid prediction for GlimmerHMM_glimmerT_24891-T1 -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: snap lend_intergenic: 11118, rend_intergenic: 8886 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 18136, rend_intergenic: 12882 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 21825, rend_intergenic: 20540 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 38228, rend_intergenic: 21868 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 47241, rend_intergenic: 42570 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 66054, rend_intergenic: 64241 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 89171, rend_intergenic: 66277 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 105538, rend_intergenic: 94180 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 113361, rend_intergenic: 107838 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 119287, rend_intergenic: 116622 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 122839, rend_intergenic: 120721 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 133490, rend_intergenic: 125744 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 176058, rend_intergenic: 174391 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 178126, rend_intergenic: 176475 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 187308, rend_intergenic: 181337 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 218732, rend_intergenic: 212860 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 224235 -exon list size: 476 building trellis 0.2 0.4 0.6 0.8 1.0 1.3 1.5 1.7 1.9 2.1 2.3 2.5 2.7 2.9 3.1 3.3 3.6 3.8 4.0 4.2 4.4 4.6 4.8 5.0 5.2 5.4 5.6 5.9 6.1 6.3 6.5 6.7 6.9 7.1 7.3 7.5 7.7 7.9 8.2 8.4 8.6 8.8 9.0 9.2 9.4 9.6 9.8 10.0 10.3 10.5 10.7 10.9 11.1 11.3 11.5 11.7 11.9 12.1 12.3 12.6 12.8 13.0 13.2 13.4 13.6 13.8 14.0 14.2 14.4 14.6 14.9 15.1 15.3 15.5 15.7 15.9 16.1 16.3 16.5 16.7 16.9 17.2 17.4 17.6 17.8 18.0 18.2 18.4 18.6 18.8 19.0 19.2 19.5 19.7 19.9 20.1 20.3 20.5 20.7 20.9 21.1 21.3 21.5 21.8 22.0 22.2 22.4 22.6 22.8 23.0 23.2 23.4 23.6 23.8 24.1 24.3 24.5 24.7 24.9 25.1 25.3 25.5 25.7 25.9 26.2 26.4 26.6 26.8 27.0 27.2 27.4 27.6 27.8 28.0 28.2 28.5 28.7 28.9 29.1 29.3 29.5 29.7 29.9 30.1 30.3 30.5 30.8 31.0 31.2 31.4 31.6 31.8 32.0 32.2 32.4 32.6 32.8 33.1 33.3 33.5 33.7 33.9 34.1 34.3 34.5 34.7 34.9 35.1 35.4 35.6 35.8 36.0 36.2 36.4 36.6 36.8 37.0 37.2 37.4 37.7 37.9 38.1 38.3 38.5 38.7 38.9 39.1 39.3 39.5 39.7 40.0 40.2 40.4 40.6 40.8 41.0 41.2 41.4 41.6 41.8 42.1 42.3 42.5 42.7 42.9 43.1 43.3 43.5 43.7 43.9 44.1 44.4 44.6 44.8 45.0 45.2 45.4 45.6 45.8 46.0 46.2 46.4 46.7 46.9 47.1 47.3 47.5 47.7 47.9 48.1 48.3 48.5 48.7 49.0 49.2 49.4 49.6 49.8 50.0 50.2 50.4 50.6 50.8 51.0 51.3 51.5 51.7 51.9 52.1 52.3 52.5 52.7 52.9 53.1 53.3 53.6 53.8 54.0 54.2 54.4 54.6 54.8 55.0 55.2 55.4 55.6 55.9 56.1 56.3 56.5 56.7 56.9 57.1 57.3 57.5 57.7 57.9 58.2 58.4 58.6 58.8 59.0 59.2 59.4 59.6 59.8 60.0 60.3 60.5 60.7 60.9 61.1 61.3 61.5 61.7 61.9 62.1 62.3 62.6 62.8 63.0 63.2 63.4 63.6 63.8 64.0 64.2 64.4 64.6 64.9 65.1 65.3 65.5 65.7 65.9 66.1 66.3 66.5 66.7 66.9 67.2 67.4 67.6 67.8 68.0 68.2 68.4 68.6 68.8 69.0 69.2 69.5 69.7 69.9 70.1 70.3 70.5 70.7 70.9 71.1 71.3 71.5 71.8 72.0 72.2 72.4 72.6 72.8 73.0 73.2 73.4 73.6 73.8 74.1 74.3 74.5 74.7 74.9 75.1 75.3 75.5 75.7 75.9 76.2 76.4 76.6 76.8 77.0 77.2 77.4 77.6 77.8 78.0 78.2 78.5 78.7 78.9 79.1 79.3 79.5 79.7 79.9 80.1 80.3 80.5 80.8 81.0 81.2 81.4 81.6 81.8 82.0 82.2 82.4 82.6 82.8 83.1 83.3 83.5 83.7 83.9 84.1 84.3 84.5 84.7 84.9 85.1 85.4 85.6 85.8 86.0 86.2 86.4 86.6 86.8 87.0 87.2 87.4 87.7 87.9 88.1 88.3 88.5 88.7 88.9 89.1 89.3 89.5 89.7 90.0 90.2 90.4 90.6 90.8 91.0 91.2 91.4 91.6 91.8 92.1 92.3 92.5 92.7 92.9 93.1 93.3 93.5 93.7 93.9 94.1 94.4 94.6 94.8 95.0 95.2 95.4 95.6 95.8 96.0 96.2 96.4 96.7 96.9 97.1 97.3 97.5 97.7 97.9 98.1 98.3 98.5 98.7 99.0 99.2 99.4 99.6 99.8 -found 31 predictions from path traversal Error with prediction: snap lend_intergenic: 11118, rend_intergenic: 8886 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 18136, rend_intergenic: 12882 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 21825, rend_intergenic: 20540 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 38228, rend_intergenic: 21868 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 47241, rend_intergenic: 42570 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 66054, rend_intergenic: 64241 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 89171, rend_intergenic: 66277 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 105538, rend_intergenic: 94180 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 113361, rend_intergenic: 107838 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 119287, rend_intergenic: 116622 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 122839, rend_intergenic: 120721 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 133490, rend_intergenic: 125744 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 176058, rend_intergenic: 174391 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 178126, rend_intergenic: 176475 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 187308, rend_intergenic: 181337 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 218732, rend_intergenic: 212860 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. GOT 5prime partial gene. -reporting highest scoring path thru the trellis. -found 28 predictions persist after filtering for low support -building DP trellis -building trellis in range 211615 - 224235 -exon list size: 18 building trellis 5.0 10.0 15.0 20.0 25.0 30.0 35.0 40.0 45.0 50.0 55.0 60.0 65.0 70.0 75.0 80.0 85.0 90.0 95.0 -found 1 predictions from path traversal -reporting highest scoring path thru the trellis. -found 1 predictions persist after filtering for low support