-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_10/scaffold_10_4495754-4666607 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for GlimmerHMM_glimmerT_24622-T1 Valid prediction for snap_scaffold_10-snap.1012-T1 Valid prediction for GlimmerHMM_glimmerT_24629-T1 Valid prediction for snap_scaffold_10-snap.997-T1 Couldn't classify 16917, 17231 Sorry, prediction pasa_asmbl_3124.p4 fails validation. (GGA) CA 16917-17231 GA GAG Valid prediction for snap_scaffold_10-snap.985-T1 Valid prediction for GlimmerHMM_glimmerT_24605-T1 Valid prediction for Augustus_model.g16396.t1 Valid prediction for snap_scaffold_10-snap.1010-T1 Valid prediction for snap_scaffold_10-snap.995-T1 Valid prediction for GlimmerHMM_glimmerT_24618-T1 Valid prediction for GlimmerHMM_glimmerT_24619-T1 Valid prediction for GlimmerHMM_glimmerT_24612-T1 Valid prediction for snap_scaffold_10-snap.976-T1 Valid prediction for GlimmerHMM_glimmerT_24631-T1 Couldn't classify 8638, 9393 Sorry, prediction pasa_asmbl_3123.p1 fails validation. (ACA) AG 8638-9393 GG TGG Valid prediction for CodingQuarry_transcript_5372-T1 Valid prediction for GlimmerHMM_glimmerT_24626-T1 Valid prediction for snap_scaffold_10-snap.991-T1 Valid prediction for HiQ_model.g16387.t1 Valid prediction for snap_scaffold_10-snap.982-T1 Valid prediction for GlimmerHMM_glimmerT_24623-T1 Valid prediction for snap_scaffold_10-snap.1004-T1 Valid prediction for Augustus_model.g16383.t1 Valid prediction for pasa_asmbl_3884.p1 Valid prediction for GlimmerHMM_glimmerT_24609-T1 Valid prediction for snap_scaffold_10-snap.989-T1 Valid prediction for snap_scaffold_10-snap.990-T1 Valid prediction for GlimmerHMM_glimmerT_24627-T1 Valid prediction for GlimmerHMM_glimmerT_24625-T1 Valid prediction for snap_scaffold_10-snap.984-T1 Valid prediction for snap_scaffold_10-snap.996-T1 Valid prediction for snap_scaffold_10-snap.1002-T1 Valid prediction for GlimmerHMM_glimmerT_24603-T1 Valid prediction for GlimmerHMM_glimmerT_24616-T1 Valid prediction for Augustus_model.g16384.t1 Valid prediction for snap_scaffold_10-snap.1006-T1 Valid prediction for snap_scaffold_10-snap.975-T1 Valid prediction for snap_scaffold_10-snap.980-T1 Valid prediction for GlimmerHMM_glimmerT_24614-T1 Valid prediction for CodingQuarry_transcript_5373-T1 Valid prediction for snap_scaffold_10-snap.981-T1 Valid prediction for snap_scaffold_10-snap.986-T1 Valid prediction for GlimmerHMM_glimmerT_24610-T1 Valid prediction for Augustus_model.g16389.t1 -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Couldn't classify 113459, 113603 Sorry, prediction pasa_asmbl_5206.p1 fails validation. (TTG) AG 113459-113603 GT AGG (ATC) AG 113798-113902 GT CGG (GTT) AG 114220-114319 GT TGG (GGT) AG 114417-114495 GG AAG -recovered pasa_asmbl_5206.p1, terminal, 114417, 114495 -recovered pasa_asmbl_5206.p1, internal, 113459, 113603 -recovered pasa_asmbl_5206.p1, internal, 113798, 113902 -recovered pasa_asmbl_5206.p1, internal, 114220, 114319 Valid prediction for snap_scaffold_10-snap.1009-T1 Valid prediction for snap_scaffold_10-snap.992-T1 Couldn't classify 137737, 137825 Couldn't classify 138450, 138521 Couldn't classify 140503, 140772 Sorry, prediction CodingQuarry_transcript_5371-T1 fails validation. (ATG) AC 133620-133704 GT ACG (CCC) AG 135441-135567 GT CCG (TTA) AG 135692-135843 GT GAG (AAC) AG 136277-136404 GT AGG (GTC) AG 136529-136670 GT GGG (CCC) AG 136936-137060 GT CGG (ATT) AG 137737-137825 CT ACC (CTG) AC 138450-138521 TA GGT (GTG) GT 140503-140772 GT AGG (GGA) AG 141151-141308 GT AGG (ACA) AG 141627-141650 GT AAG (CCA) AG 141783-141871 GT AGG (AAT) AG 143847-144006 GT GGG (TCT) AG 144086-144278 GT AGG (GGT) AG 144395-144586 GT AGG (AGC) AG 146545-146693 GT GGG (GTG) AG 147386-148095 TC GAT -recovered CodingQuarry_transcript_5371-T1, initial, 133620, 133704 add_exon() Sorry, CodingQuarry_transcript_5371-T1 135692-135843-terminal-2 is invalid. -recovered CodingQuarry_transcript_5371-T1, terminal, 135692, 135843 add_exon() Sorry, CodingQuarry_transcript_5371-T1 141151-141308-terminal-2 is invalid. -recovered CodingQuarry_transcript_5371-T1, terminal, 141151, 141308 -recovered CodingQuarry_transcript_5371-T1, terminal, 147386, 148095 -recovered CodingQuarry_transcript_5371-T1, internal, 135441, 135567 -recovered CodingQuarry_transcript_5371-T1, internal, 135692, 135843 -recovered CodingQuarry_transcript_5371-T1, internal, 136277, 136404 -recovered CodingQuarry_transcript_5371-T1, internal, 136529, 136670 -recovered CodingQuarry_transcript_5371-T1, internal, 136936, 137060 -recovered CodingQuarry_transcript_5371-T1, internal, 141151, 141308 -recovered CodingQuarry_transcript_5371-T1, internal, 141627, 141650 -recovered CodingQuarry_transcript_5371-T1, internal, 141783, 141871 -recovered CodingQuarry_transcript_5371-T1, internal, 143847, 144006 -recovered CodingQuarry_transcript_5371-T1, internal, 144086, 144278 -recovered CodingQuarry_transcript_5371-T1, internal, 144395, 144586 -recovered CodingQuarry_transcript_5371-T1, internal, 146545, 146693 Couldn't classify 137737, 137897 Couldn't classify 140503, 140772 Sorry, prediction CodingQuarry_transcript_5368-T1 fails validation. (ATG) AC 133620-133704 GT ACG (CCC) AG 135441-135567 GT CCG (TTA) AG 135692-135843 GT GAG (AAC) AG 136277-136404 GT AGG (GTC) AG 136529-136670 GT GGG (CCC) AG 136936-137060 GT CGG (ATT) AG 137737-137897 TA GGT (GTG) GT 140503-140772 GT AGG (GGA) AG 141151-141308 GT AGG (ACA) AG 141627-141650 GT AAG (CCA) AG 142388-142476 GT AGG (AAT) AG 143847-144006 GT GGG (TCT) AG 144086-144278 GT AGG (GGT) AG 144395-144586 GT AGG (AGC) AG 146545-146693 GT GGG (GTG) AG 147386-148095 TC GAT -recovered CodingQuarry_transcript_5368-T1, initial, 133620, 133704 add_exon() Sorry, CodingQuarry_transcript_5368-T1 135692-135843-terminal-2 is invalid. -recovered CodingQuarry_transcript_5368-T1, terminal, 135692, 135843 add_exon() Sorry, CodingQuarry_transcript_5368-T1 141151-141308-terminal-2 is invalid. -recovered CodingQuarry_transcript_5368-T1, terminal, 141151, 141308 -recovered CodingQuarry_transcript_5368-T1, terminal, 147386, 148095 -recovered CodingQuarry_transcript_5368-T1, internal, 135441, 135567 -recovered CodingQuarry_transcript_5368-T1, internal, 135692, 135843 -recovered CodingQuarry_transcript_5368-T1, internal, 136277, 136404 -recovered CodingQuarry_transcript_5368-T1, internal, 136529, 136670 -recovered CodingQuarry_transcript_5368-T1, internal, 136936, 137060 -recovered CodingQuarry_transcript_5368-T1, internal, 141151, 141308 -recovered CodingQuarry_transcript_5368-T1, internal, 141627, 141650 -recovered CodingQuarry_transcript_5368-T1, internal, 142388, 142476 -recovered CodingQuarry_transcript_5368-T1, internal, 143847, 144006 -recovered CodingQuarry_transcript_5368-T1, internal, 144086, 144278 -recovered CodingQuarry_transcript_5368-T1, internal, 144395, 144586 -recovered CodingQuarry_transcript_5368-T1, internal, 146545, 146693 Valid prediction for GlimmerHMM_glimmerT_24604-T1 Valid prediction for CodingQuarry_transcript_5375-T1 Valid prediction for snap_scaffold_10-snap.1007-T1 Valid prediction for snap_scaffold_10-snap.987-T1 Valid prediction for pasa_asmbl_4298.p1 Couldn't classify 112269, 112353 Sorry, prediction pasa_asmbl_5200.p1 fails validation. (ATG) AG 109546-109642 GT AGG (TGT) AG 110434-110500 GT AGG (GCG) AG 110589-110761 GT ATG (ATC) AG 111956-112070 GT AGG (GGG) AG 112269-112353 GT TTG -recovered pasa_asmbl_5200.p1, initial, 109546, 109642 -recovered pasa_asmbl_5200.p1, internal, 109546, 109642 -recovered pasa_asmbl_5200.p1, internal, 110434, 110500 -recovered pasa_asmbl_5200.p1, internal, 110589, 110761 -recovered pasa_asmbl_5200.p1, internal, 111956, 112070 -recovered pasa_asmbl_5200.p1, internal, 112269, 112353 Valid prediction for GlimmerHMM_glimmerT_24621-T1 Valid prediction for snap_scaffold_10-snap.1008-T1 Valid prediction for snap_scaffold_10-snap.1013-T1 Valid prediction for GlimmerHMM_glimmerT_24620-T1 Valid prediction for snap_scaffold_10-snap.988-T1 Sorry, intron length (7) is less than minimum required (10) Valid prediction for GlimmerHMM_glimmerT_24608-T1 Valid prediction for GlimmerHMM_glimmerT_24602-T1 Valid prediction for snap_scaffold_10-snap.1003-T1 Valid prediction for Augustus_model.g16392.t1 Valid prediction for pasa_asmbl_4296.p1 Valid prediction for GlimmerHMM_glimmerT_24606-T1 Valid prediction for snap_scaffold_10-snap.977-T1 Valid prediction for snap_scaffold_10-snap.1011-T1 Couldn't classify 86976, 87165 Couldn't classify 91649, 91649 Sorry, prediction pasa_asmbl_4303.p2 fails validation. (GTC) AG 86976-87165 GT AGG (AGA) AG 88532-88664 GT TGG (ATA) AG 91649-91649 TA GAT -recovered pasa_asmbl_4303.p2, terminal, 86976, 87165 -recovered pasa_asmbl_4303.p2, internal, 86976, 87165 -recovered pasa_asmbl_4303.p2, internal, 88532, 88664 Valid prediction for Augustus_model.g16394.t1 Valid prediction for CodingQuarry_transcript_5377-T1 Valid prediction for snap_scaffold_10-snap.1005-T1 Valid prediction for HiQ_model.g16391.t1 Valid prediction for GlimmerHMM_glimmerT_24624-T1 Valid prediction for snap_scaffold_10-snap.1000-T1 Valid prediction for Augustus_model.g16385.t1 Valid prediction for GlimmerHMM_glimmerT_24617-T1 Valid prediction for Augustus_model.g16382.t1 Valid prediction for Augustus_model.g16390.t1 Valid prediction for CodingQuarry_transcript_5374-T1 Valid prediction for snap_scaffold_10-snap.983-T1 Valid prediction for snap_scaffold_10-snap.979-T1 Valid prediction for snap_scaffold_10-snap.998-T1 Valid prediction for GlimmerHMM_glimmerT_24613-T1 Valid prediction for GlimmerHMM_glimmerT_24628-T1 Valid prediction for GlimmerHMM_glimmerT_24611-T1 Valid prediction for snap_scaffold_10-snap.1001-T1 Couldn't classify 137737, 137825 Couldn't classify 138450, 138521 Couldn't classify 140503, 140772 Sorry, prediction CodingQuarry_transcript_5370-T1 fails validation. (ATG) AC 133620-133704 GT ACG (CCC) AG 135441-135567 GT CCG (TTA) AG 135692-135843 GT GAG (AAC) AG 136277-136404 GT AGG (GTC) AG 136529-136670 GT GGG (CCC) AG 136936-137060 GT CGG (ATT) AG 137737-137825 CT ACC (CTG) AC 138450-138521 TA GGT (GTG) GT 140503-140772 GT AGG (GGA) AG 141151-141308 GT AGG (ACA) AG 142232-142255 GT AAG (CCA) AG 142388-142476 GT AGG (AAT) AG 143847-144006 GT GGG (TCT) AG 144086-144278 GT AGG (GGT) AG 144395-144586 GT AGG (AGC) AG 146545-146693 GT GGG (GTG) AG 147386-148095 TC GAT -recovered CodingQuarry_transcript_5370-T1, initial, 133620, 133704 add_exon() Sorry, CodingQuarry_transcript_5370-T1 135692-135843-terminal-2 is invalid. -recovered CodingQuarry_transcript_5370-T1, terminal, 135692, 135843 add_exon() Sorry, CodingQuarry_transcript_5370-T1 141151-141308-terminal-2 is invalid. -recovered CodingQuarry_transcript_5370-T1, terminal, 141151, 141308 -recovered CodingQuarry_transcript_5370-T1, terminal, 147386, 148095 -recovered CodingQuarry_transcript_5370-T1, internal, 135441, 135567 -recovered CodingQuarry_transcript_5370-T1, internal, 135692, 135843 -recovered CodingQuarry_transcript_5370-T1, internal, 136277, 136404 -recovered CodingQuarry_transcript_5370-T1, internal, 136529, 136670 -recovered CodingQuarry_transcript_5370-T1, internal, 136936, 137060 -recovered CodingQuarry_transcript_5370-T1, internal, 141151, 141308 -recovered CodingQuarry_transcript_5370-T1, internal, 142232, 142255 -recovered CodingQuarry_transcript_5370-T1, internal, 142388, 142476 -recovered CodingQuarry_transcript_5370-T1, internal, 143847, 144006 -recovered CodingQuarry_transcript_5370-T1, internal, 144086, 144278 -recovered CodingQuarry_transcript_5370-T1, internal, 144395, 144586 -recovered CodingQuarry_transcript_5370-T1, internal, 146545, 146693 Valid prediction for Augustus_model.g16388.t1 Valid prediction for Augustus_model.g16395.t1 Valid prediction for Augustus_model.g16386.t1 Valid prediction for GlimmerHMM_glimmerT_24630-T1 Valid prediction for snap_scaffold_10-snap.978-T1 Valid prediction for GlimmerHMM_glimmerT_24607-T1 Couldn't classify 137737, 137897 Couldn't classify 140503, 140772 Sorry, prediction CodingQuarry_transcript_5369-T1 fails validation. (ATG) AC 133620-133704 GT ACG (CCC) AG 135441-135567 GT CCG (TTA) AG 135692-135843 GT GAG (AAC) AG 136277-136404 GT AGG (GTC) AG 136529-136670 GT GGG (CCC) AG 136936-137060 GT CGG (ATT) AG 137737-137897 TA GGT (GTG) GT 140503-140772 GT AGG (GGA) AG 141151-141308 GT AGG (ACA) AG 141627-141871 GT AGG (AAT) AG 143847-144006 GT GGG (TCT) AG 144086-144278 GT AGG (GGT) AG 144395-144586 GT AGG (AGC) AG 146545-146693 GT GGG (GTG) AG 147386-148095 TC GAT -recovered CodingQuarry_transcript_5369-T1, initial, 133620, 133704 add_exon() Sorry, CodingQuarry_transcript_5369-T1 135692-135843-terminal-2 is invalid. -recovered CodingQuarry_transcript_5369-T1, terminal, 135692, 135843 add_exon() Sorry, CodingQuarry_transcript_5369-T1 141151-141308-terminal-2 is invalid. -recovered CodingQuarry_transcript_5369-T1, terminal, 141151, 141308 -recovered CodingQuarry_transcript_5369-T1, terminal, 147386, 148095 -recovered CodingQuarry_transcript_5369-T1, internal, 135441, 135567 -recovered CodingQuarry_transcript_5369-T1, internal, 135692, 135843 -recovered CodingQuarry_transcript_5369-T1, internal, 136277, 136404 -recovered CodingQuarry_transcript_5369-T1, internal, 136529, 136670 -recovered CodingQuarry_transcript_5369-T1, internal, 136936, 137060 -recovered CodingQuarry_transcript_5369-T1, internal, 141151, 141308 -recovered CodingQuarry_transcript_5369-T1, internal, 141627, 141871 -recovered CodingQuarry_transcript_5369-T1, internal, 143847, 144006 -recovered CodingQuarry_transcript_5369-T1, internal, 144086, 144278 -recovered CodingQuarry_transcript_5369-T1, internal, 144395, 144586 -recovered CodingQuarry_transcript_5369-T1, internal, 146545, 146693 Valid prediction for GlimmerHMM_glimmerT_24615-T1 Valid prediction for snap_scaffold_10-snap.999-T1 Valid prediction for snap_scaffold_10-snap.994-T1 Valid prediction for Augustus_model.g16393.t1 Valid prediction for snap_scaffold_10-snap.993-T1 -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: snap lend_intergenic: 9405, rend_intergenic: 5688 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 17050, rend_intergenic: 14644 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 39393, rend_intergenic: 22784 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 53131, rend_intergenic: 39540 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 67948, rend_intergenic: 55204 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 82334, rend_intergenic: 68024 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 105386, rend_intergenic: 83635 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 120776, rend_intergenic: 106498 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 124356, rend_intergenic: 121627 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 134377, rend_intergenic: 124717 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 138185, rend_intergenic: 134470 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 140343, rend_intergenic: 138410 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 152590, rend_intergenic: 141132 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 156043, rend_intergenic: 152754 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 166423, rend_intergenic: 158117 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 170854 -exon list size: 364 building trellis 0.3 0.5 0.8 1.1 1.4 1.6 1.9 2.2 2.5 2.7 3.0 3.3 3.6 3.8 4.1 4.4 4.6 4.9 5.2 5.5 5.7 6.0 6.3 6.6 6.8 7.1 7.4 7.7 7.9 8.2 8.5 8.7 9.0 9.3 9.6 9.8 10.1 10.4 10.7 10.9 11.2 11.5 11.7 12.0 12.3 12.6 12.8 13.1 13.4 13.7 13.9 14.2 14.5 14.8 15.0 15.3 15.6 15.8 16.1 16.4 16.7 16.9 17.2 17.5 17.8 18.0 18.3 18.6 18.9 19.1 19.4 19.7 19.9 20.2 20.5 20.8 21.0 21.3 21.6 21.9 22.1 22.4 22.7 23.0 23.2 23.5 23.8 24.0 24.3 24.6 24.9 25.1 25.4 25.7 26.0 26.2 26.5 26.8 27.0 27.3 27.6 27.9 28.1 28.4 28.7 29.0 29.2 29.5 29.8 30.1 30.3 30.6 30.9 31.1 31.4 31.7 32.0 32.2 32.5 32.8 33.1 33.3 33.6 33.9 34.2 34.4 34.7 35.0 35.2 35.5 35.8 36.1 36.3 36.6 36.9 37.2 37.4 37.7 38.0 38.3 38.5 38.8 39.1 39.3 39.6 39.9 40.2 40.4 40.7 41.0 41.3 41.5 41.8 42.1 42.3 42.6 42.9 43.2 43.4 43.7 44.0 44.3 44.5 44.8 45.1 45.4 45.6 45.9 46.2 46.4 46.7 47.0 47.3 47.5 47.8 48.1 48.4 48.6 48.9 49.2 49.5 49.7 50.0 50.3 50.5 50.8 51.1 51.4 51.6 51.9 52.2 52.5 52.7 53.0 53.3 53.6 53.8 54.1 54.4 54.6 54.9 55.2 55.5 55.7 56.0 56.3 56.6 56.8 57.1 57.4 57.7 57.9 58.2 58.5 58.7 59.0 59.3 59.6 59.8 60.1 60.4 60.7 60.9 61.2 61.5 61.7 62.0 62.3 62.6 62.8 63.1 63.4 63.7 63.9 64.2 64.5 64.8 65.0 65.3 65.6 65.8 66.1 66.4 66.7 66.9 67.2 67.5 67.8 68.0 68.3 68.6 68.9 69.1 69.4 69.7 69.9 70.2 70.5 70.8 71.0 71.3 71.6 71.9 72.1 72.4 72.7 73.0 73.2 73.5 73.8 74.0 74.3 74.6 74.9 75.1 75.4 75.7 76.0 76.2 76.5 76.8 77.0 77.3 77.6 77.9 78.1 78.4 78.7 79.0 79.2 79.5 79.8 80.1 80.3 80.6 80.9 81.1 81.4 81.7 82.0 82.2 82.5 82.8 83.1 83.3 83.6 83.9 84.2 84.4 84.7 85.0 85.2 85.5 85.8 86.1 86.3 86.6 86.9 87.2 87.4 87.7 88.0 88.3 88.5 88.8 89.1 89.3 89.6 89.9 90.2 90.4 90.7 91.0 91.3 91.5 91.8 92.1 92.3 92.6 92.9 93.2 93.4 93.7 94.0 94.3 94.5 94.8 95.1 95.4 95.6 95.9 96.2 96.4 96.7 97.0 97.3 97.5 97.8 98.1 98.4 98.6 98.9 99.2 99.5 99.7 -found 28 predictions from path traversal Error with prediction: snap lend_intergenic: 9405, rend_intergenic: 5688 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 17050, rend_intergenic: 14644 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 39393, rend_intergenic: 22784 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 53131, rend_intergenic: 39540 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 67948, rend_intergenic: 55204 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 82334, rend_intergenic: 68024 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 105386, rend_intergenic: 83635 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 120776, rend_intergenic: 106498 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 124356, rend_intergenic: 121627 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 134377, rend_intergenic: 124717 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 138185, rend_intergenic: 134470 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 140343, rend_intergenic: 138410 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 152590, rend_intergenic: 141132 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 156043, rend_intergenic: 152754 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 166423, rend_intergenic: 158117 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -reporting highest scoring path thru the trellis. -found 20 predictions persist after filtering for low support -building DP trellis -building trellis in range 159739 - 170854 -exon list size: 9 building trellis 9.1 18.2 27.3 36.4 45.5 54.5 63.6 72.7 81.8 90.9 -found 1 predictions from path traversal GOT 5prime partial gene. -reporting highest scoring path thru the trellis. -found 0 predictions persist after filtering for low support