-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_10/scaffold_10_14493383-14742399

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_10-snap.2932-T1
Valid prediction for GlimmerHMM_glimmerT_25892-T1
Valid prediction for GlimmerHMM_glimmerT_25917-T1
Valid prediction for snap_scaffold_10-snap.2900-T1
Valid prediction for snap_scaffold_10-snap.2943-T1
Valid prediction for GlimmerHMM_glimmerT_25898-T1
Valid prediction for GlimmerHMM_glimmerT_25923-T1
Valid prediction for Augustus_model.g17212.t1
Valid prediction for GlimmerHMM_glimmerT_25895-T1
Valid prediction for snap_scaffold_10-snap.2944-T1
Valid prediction for GlimmerHMM_glimmerT_25922-T1
Valid prediction for snap_scaffold_10-snap.2927-T1
Valid prediction for snap_scaffold_10-snap.2924-T1
Valid prediction for CodingQuarry_transcript_5655-T1
Valid prediction for Augustus_model.g17220.t1
Couldn't classify 246544, 246593
Sorry, prediction pasa_asmbl_3661.p1 fails validation.
(CTT)	 TC	246544-246593	GC	TGG
(GCT)	 AG	246685-246751	GT	CGG
(AAG)	 AG	246844-247611	CT	AAC
-recovered pasa_asmbl_3661.p1, terminal, 246844, 247611
-recovered pasa_asmbl_3661.p1, internal, 246685, 246751
Valid prediction for snap_scaffold_10-snap.2901-T1
Valid prediction for GlimmerHMM_glimmerT_25919-T1
Valid prediction for snap_scaffold_10-snap.2906-T1
Couldn't classify 194457, 194516
Sorry, prediction pasa_asmbl_3649.p1 fails validation.
(GAG)	 CA	194457-194516	GT	AGG
(AGA)	 AG	194632-194662	GT	AGG
(TAG)	 AG	194806-194868	GT	CAG
(GTT)	 AG	195464-195526	GT	AGG
(TGT)	 AG	197092-197148	GT	AGG
(CTT)	 AG	197496-197584	GT	AGG
(GGT)	 AG	198218-198294	GT	AGG
(ATC)	 AG	198536-198608	GT	TGG
(AGT)	 AG	198757-198844	GT	CGG
(AGA)	 AG	199348-199469	GT	AGG
(ATG)	 AG	199595-199715	GT	CGG
(TCA)	 AG	200031-200414	GT	TGG
(TGG)	 AG	201715-201761	CG	GAC
-recovered pasa_asmbl_3649.p1, initial, 199595, 199715
-recovered pasa_asmbl_3649.p1, terminal, 201715, 201761
-recovered pasa_asmbl_3649.p1, internal, 194632, 194662
-recovered pasa_asmbl_3649.p1, internal, 194806, 194868
-recovered pasa_asmbl_3649.p1, internal, 195464, 195526
-recovered pasa_asmbl_3649.p1, internal, 197092, 197148
-recovered pasa_asmbl_3649.p1, internal, 197496, 197584
-recovered pasa_asmbl_3649.p1, internal, 198218, 198294
-recovered pasa_asmbl_3649.p1, internal, 198536, 198608
-recovered pasa_asmbl_3649.p1, internal, 198757, 198844
-recovered pasa_asmbl_3649.p1, internal, 199348, 199469
-recovered pasa_asmbl_3649.p1, internal, 199595, 199715
-recovered pasa_asmbl_3649.p1, internal, 200031, 200414
Valid prediction for GlimmerHMM_glimmerT_25905-T1
Valid prediction for snap_scaffold_10-snap.2926-T1
Valid prediction for CodingQuarry_transcript_5654-T1
Valid prediction for snap_scaffold_10-snap.2917-T1
Valid prediction for HiQ_model.g17229.t1
Valid prediction for GlimmerHMM_glimmerT_25906-T1
Valid prediction for snap_scaffold_10-snap.2921-T1
Valid prediction for snap_scaffold_10-snap.2931-T1
Valid prediction for snap_scaffold_10-snap.2951-T1
Valid prediction for pasa_asmbl_3655.p1
Valid prediction for snap_scaffold_10-snap.2899-T1
Valid prediction for GlimmerHMM_glimmerT_25911-T1
Valid prediction for GlimmerHMM_glimmerT_25918-T1
Valid prediction for Augustus_model.g17213.t1
Valid prediction for GlimmerHMM_glimmerT_25920-T1
Valid prediction for snap_scaffold_10-snap.2922-T1
Valid prediction for GlimmerHMM_glimmerT_25896-T1
Valid prediction for snap_scaffold_10-snap.2939-T1
Valid prediction for snap_scaffold_10-snap.2950-T1
Valid prediction for snap_scaffold_10-snap.2910-T1
Valid prediction for Augustus_model.g17227.t1
Valid prediction for Augustus_model.g17232.t1
Valid prediction for Augustus_model.g17231.t1
Valid prediction for snap_scaffold_10-snap.2933-T1
Valid prediction for snap_scaffold_10-snap.2902-T1
Valid prediction for snap_scaffold_10-snap.2930-T1
Valid prediction for GlimmerHMM_glimmerT_25890-T1
Valid prediction for snap_scaffold_10-snap.2923-T1
Valid prediction for Augustus_model.g17226.t1
Valid prediction for snap_scaffold_10-snap.2938-T1
Valid prediction for snap_scaffold_10-snap.2946-T1
Sorry, intron length (7) is less than minimum required (10)
Valid prediction for Augustus_model.g17228.t1
Valid prediction for snap_scaffold_10-snap.2918-T1
Valid prediction for Augustus_model.g17214.t1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_10-snap.2936-T1
Valid prediction for GlimmerHMM_glimmerT_25916-T1
Valid prediction for snap_scaffold_10-snap.2940-T1
Valid prediction for GlimmerHMM_glimmerT_25891-T1
Valid prediction for snap_scaffold_10-snap.2904-T1
Valid prediction for snap_scaffold_10-snap.2908-T1
Valid prediction for snap_scaffold_10-snap.2949-T1
Valid prediction for GlimmerHMM_glimmerT_25893-T1
Valid prediction for snap_scaffold_10-snap.2920-T1
Valid prediction for Augustus_model.g17223.t1
Valid prediction for Augustus_model.g17219.t1
Valid prediction for snap_scaffold_10-snap.2916-T1
Valid prediction for snap_scaffold_10-snap.2909-T1
Valid prediction for snap_scaffold_10-snap.2914-T1
Valid prediction for snap_scaffold_10-snap.2905-T1
Valid prediction for snap_scaffold_10-snap.2942-T1
Valid prediction for Augustus_model.g17221.t1
Valid prediction for Augustus_model.g17225.t1
Valid prediction for GlimmerHMM_glimmerT_25912-T1
Valid prediction for GlimmerHMM_glimmerT_25913-T1
Valid prediction for snap_scaffold_10-snap.2925-T1
Valid prediction for GlimmerHMM_glimmerT_25909-T1
Couldn't classify 92477, 92605
Sorry, prediction pasa_asmbl_4954.p1 fails validation.
(GGC)	 GT	92477-92605	GT	TGG
(GTG)	 AG	93593-93736	GT	AGG
(GCT)	 AG	94046-94132	GT	TGG
(TTC)	 AG	94308-94528	GT	AGG
(GAT)	 AG	94630-94732	GT	AGG
(ATT)	 AG	95144-95242	GT	GGG
(TCG)	 AG	95603-95749	GT	TGG
(GAC)	 AG	96349-96483	GT	AGG
(AAA)	 AG	96681-96779	GT	TGG
(GTG)	 AG	96892-96945	GT	ACG
(CTG)	 AG	97156-97264	GT	AGG
(ACG)	 AG	97556-97680	GT	ACG
(ACC)	 AG	98076-98216	GT	CGG
(GTT)	 AG	98455-98548	GT	CGG
(GTG)	 AG	98832-98986	GT	AGG
(GTG)	 AG	99387-99477	GT	GGG
(GCT)	 AG	99827-100000	GT	GTG
(GGA)	 AG	100276-100466	GT	AGG
(TGC)	 AG	100801-100908	GT	ATG
(ATG)	 AG	101621-101821	GT	CTG
(AAG)	 AG	102363-102509	GT	AGG
(TCC)	 AG	102629-102993	GT	AGG
(TAA)	 AG	103332-103506	GT	ATG
(TTC)	 AG	103860-104042	GT	GGG
(GCA)	 AG	104382-104747	TC	AAT
-recovered pasa_asmbl_4954.p1, initial, 101621, 101821
-recovered pasa_asmbl_4954.p1, terminal, 104382, 104747
-recovered pasa_asmbl_4954.p1, internal, 93593, 93736
-recovered pasa_asmbl_4954.p1, internal, 94046, 94132
-recovered pasa_asmbl_4954.p1, internal, 94308, 94528
-recovered pasa_asmbl_4954.p1, internal, 94630, 94732
-recovered pasa_asmbl_4954.p1, internal, 95144, 95242
-recovered pasa_asmbl_4954.p1, internal, 95603, 95749
-recovered pasa_asmbl_4954.p1, internal, 96349, 96483
-recovered pasa_asmbl_4954.p1, internal, 96681, 96779
-recovered pasa_asmbl_4954.p1, internal, 96892, 96945
-recovered pasa_asmbl_4954.p1, internal, 97156, 97264
-recovered pasa_asmbl_4954.p1, internal, 97556, 97680
-recovered pasa_asmbl_4954.p1, internal, 98076, 98216
-recovered pasa_asmbl_4954.p1, internal, 98455, 98548
-recovered pasa_asmbl_4954.p1, internal, 98832, 98986
-recovered pasa_asmbl_4954.p1, internal, 99387, 99477
-recovered pasa_asmbl_4954.p1, internal, 99827, 100000
-recovered pasa_asmbl_4954.p1, internal, 100276, 100466
-recovered pasa_asmbl_4954.p1, internal, 100801, 100908
-recovered pasa_asmbl_4954.p1, internal, 101621, 101821
-recovered pasa_asmbl_4954.p1, internal, 102363, 102509
-recovered pasa_asmbl_4954.p1, internal, 102629, 102993
-recovered pasa_asmbl_4954.p1, internal, 103332, 103506
-recovered pasa_asmbl_4954.p1, internal, 103860, 104042
Valid prediction for snap_scaffold_10-snap.2913-T1
Valid prediction for snap_scaffold_10-snap.2941-T1
Valid prediction for snap_scaffold_10-snap.2912-T1
Valid prediction for GlimmerHMM_glimmerT_25915-T1
Couldn't classify 192812, 192999
Sorry, prediction pasa_asmbl_4947.p1 fails validation.
(ATG)	 CG	191412-191651	GT	AGG
(GTT)	 AG	191814-191988	GT	CGG
(ATC)	 AG	192102-192131	GT	AGG
(GCA)	 AG	192812-192999	AG	CCA
-recovered pasa_asmbl_4947.p1, initial, 191412, 191651
-recovered pasa_asmbl_4947.p1, internal, 191814, 191988
-recovered pasa_asmbl_4947.p1, internal, 192102, 192131
Valid prediction for GlimmerHMM_glimmerT_25921-T1
Valid prediction for GlimmerHMM_glimmerT_25900-T1
Valid prediction for Augustus_model.g17217.t1
Valid prediction for GlimmerHMM_glimmerT_25902-T1
Valid prediction for Augustus_model.g17230.t1
Valid prediction for snap_scaffold_10-snap.2907-T1
Valid prediction for snap_scaffold_10-snap.2898-T1
Valid prediction for snap_scaffold_10-snap.2937-T1
Valid prediction for GlimmerHMM_glimmerT_25914-T1
Couldn't classify 121088, 121208
Sorry, prediction pasa_asmbl_4950.p1 fails validation.
(CTG)	 AG	121088-121208	GT	AGG
(AGC)	 AG	121318-121428	GT	AGG
(AAT)	 AG	121864-122000	GT	GGG
(GAT)	 AG	122570-122676	GT	AGG
(GCG)	 AG	123003-123141	CC	GAC
add_exon() Sorry, pasa_asmbl_4950.p1 121318-121428-terminal-1 is invalid.
-recovered pasa_asmbl_4950.p1, terminal, 121318, 121428
-recovered pasa_asmbl_4950.p1, terminal, 123003, 123141
-recovered pasa_asmbl_4950.p1, internal, 121088, 121208
-recovered pasa_asmbl_4950.p1, internal, 121318, 121428
-recovered pasa_asmbl_4950.p1, internal, 121864, 122000
-recovered pasa_asmbl_4950.p1, internal, 122570, 122676
Valid prediction for snap_scaffold_10-snap.2911-T1
Valid prediction for snap_scaffold_10-snap.2915-T1
Valid prediction for GlimmerHMM_glimmerT_25903-T1
Valid prediction for snap_scaffold_10-snap.2945-T1
Valid prediction for GlimmerHMM_glimmerT_25901-T1
Valid prediction for Augustus_model.g17215.t1
Valid prediction for GlimmerHMM_glimmerT_25907-T1
Valid prediction for snap_scaffold_10-snap.2929-T1
Valid prediction for Augustus_model.g17224.t1
Valid prediction for Augustus_model.g17222.t1
Valid prediction for Augustus_model.g17218.t1
Valid prediction for GlimmerHMM_glimmerT_25908-T1
Valid prediction for Augustus_model.g17216.t1
Valid prediction for snap_scaffold_10-snap.2903-T1
Valid prediction for snap_scaffold_10-snap.2947-T1
Valid prediction for GlimmerHMM_glimmerT_25894-T1
Valid prediction for GlimmerHMM_glimmerT_25910-T1
Couldn't classify 85538, 85853
Couldn't classify 87720, 87778
Sorry, prediction pasa_asmbl_4956.p1 fails validation.
(CAG)	 GC	85538-85853	GT	AGG
(GAG)	 AG	87409-87591	GT	GTG
(CTG)	 AG	87720-87778	AG	AGA
-recovered pasa_asmbl_4956.p1, internal, 87409, 87591
Valid prediction for GlimmerHMM_glimmerT_25899-T1
Valid prediction for snap_scaffold_10-snap.2935-T1
Couldn't classify 88245, 88275
Couldn't classify 90044, 90115
Sorry, prediction pasa_asmbl_4955.p1 fails validation.
(AAG)	 GG	88245-88275	GT	GGG
(AGC)	 AG	88404-88487	GT	AGG
(ACG)	 AG	88906-89006	GT	GGG
(GTT)	 AG	89574-89660	GT	ACG
(GAC)	 AG	90044-90115	GC	ACG
-recovered pasa_asmbl_4955.p1, internal, 88404, 88487
-recovered pasa_asmbl_4955.p1, internal, 88906, 89006
-recovered pasa_asmbl_4955.p1, internal, 89574, 89660
-recovered pasa_asmbl_4955.p1, internal, 90044, 90115
Valid prediction for snap_scaffold_10-snap.2919-T1
Valid prediction for snap_scaffold_10-snap.2948-T1
Couldn't classify 85064, 85426
Sorry, prediction pasa_asmbl_4957.p1 fails validation.
(GAC)	 GG	85064-85426	AA	GGA
Couldn't classify 118350, 118510
Couldn't classify 120144, 120276
Sorry, prediction pasa_asmbl_4952.p1 fails validation.
(GTG)	 GT	118350-118510	GT	AGG
(ACT)	 AG	118782-118935	GT	ACG
(TTG)	 AG	119237-119341	GT	AGG
(GTG)	 AG	119637-119791	GT	AGG
(TAC)	 AG	120144-120276	GG	TGG
-recovered pasa_asmbl_4952.p1, internal, 118782, 118935
-recovered pasa_asmbl_4952.p1, internal, 119237, 119341
-recovered pasa_asmbl_4952.p1, internal, 119637, 119791
Valid prediction for pasa_asmbl_4945.p1
Valid prediction for CodingQuarry_transcript_5652-T1
Valid prediction for GlimmerHMM_glimmerT_25904-T1
Valid prediction for GlimmerHMM_glimmerT_25897-T1
Valid prediction for snap_scaffold_10-snap.2934-T1
Couldn't classify 91145, 91198
Couldn't classify 92014, 92146
Sorry, prediction pasa_asmbl_5075.p1 fails validation.
(AAC)	 GC	91145-91198	GT	AGG
(GTC)	 AG	91301-91381	GT	CGG
(GTG)	 AG	91664-91764	GT	AGG
(GCT)	 AG	92014-92146	GT	AGG
-recovered pasa_asmbl_5075.p1, internal, 91301, 91381
-recovered pasa_asmbl_5075.p1, internal, 91664, 91764
-recovered pasa_asmbl_5075.p1, internal, 92014, 92146
Valid prediction for snap_scaffold_10-snap.2928-T1
Valid prediction for CodingQuarry_transcript_5653-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 47530, rend_intergenic: 28124  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 56160, rend_intergenic: 54498  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 77805, rend_intergenic: 73342  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 96648, rend_intergenic: 92718  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 101215, rend_intergenic: 96933  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 116875, rend_intergenic: 105823  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 141651, rend_intergenic: 126782  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 169969, rend_intergenic: 144503  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 190889, rend_intergenic: 187955  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 201121, rend_intergenic: 194777  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 206483, rend_intergenic: 204112  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 237022, rend_intergenic: 223371  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 249017
-exon list size: 637


building trellis

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49.0    
49.1    
49.3    
49.5    
49.6    
49.8    
49.9    
50.1    
50.2    
50.4    
50.5    
50.7    
50.9    
51.0    
51.2    
51.3    
51.5    
51.6    
51.8    
52.0    
52.1    
52.3    
52.4    
52.6    
52.7    
52.9    
53.1    
53.2    
53.4    
53.5    
53.7    
53.8    
54.0    
54.1    
54.3    
54.5    
54.6    
54.8    
54.9    
55.1    
55.2    
55.4    
55.6    
55.7    
55.9    
56.0    
56.2    
56.3    
56.5    
56.7    
56.8    
57.0    
57.1    
57.3    
57.4    
57.6    
57.7    
57.9    
58.1    
58.2    
58.4    
58.5    
58.7    
58.8    
59.0    
59.2    
59.3    
59.5    
59.6    
59.8    
59.9    
60.1    
60.3    
60.4    
60.6    
60.7    
60.9    
61.0    
61.2    
61.3    
61.5    
61.7    
61.8    
62.0    
62.1    
62.3    
62.4    
62.6    
62.8    
62.9    
63.1    
63.2    
63.4    
63.5    
63.7    
63.8    
64.0    
64.2    
64.3    
64.5    
64.6    
64.8    
64.9    
65.1    
65.3    
65.4    
65.6    
65.7    
65.9    
66.0    
66.2    
66.4    
66.5    
66.7    
66.8    
67.0    
67.1    
67.3    
67.4    
67.6    
67.8    
67.9    
68.1    
68.2    
68.4    
68.5    
68.7    
68.9    
69.0    
69.2    
69.3    
69.5    
69.6    
69.8    
70.0    
70.1    
70.3    
70.4    
70.6    
70.7    
70.9    
71.0    
71.2    
71.4    
71.5    
71.7    
71.8    
72.0    
72.1    
72.3    
72.5    
72.6    
72.8    
72.9    
73.1    
73.2    
73.4    
73.6    
73.7    
73.9    
74.0    
74.2    
74.3    
74.5    
74.6    
74.8    
75.0    
75.1    
75.3    
75.4    
75.6    
75.7    
75.9    
76.1    
76.2    
76.4    
76.5    
76.7    
76.8    
77.0    
77.2    
77.3    
77.5    
77.6    
77.8    
77.9    
78.1    
78.2    
78.4    
78.6    
78.7    
78.9    
79.0    
79.2    
79.3    
79.5    
79.7    
79.8    
80.0    
80.1    
80.3    
80.4    
80.6    
80.8    
80.9    
81.1    
81.2    
81.4    
81.5    
81.7    
81.8    
82.0    
82.2    
82.3    
82.5    
82.6    
82.8    
82.9    
83.1    
83.3    
83.4    
83.6    
83.7    
83.9    
84.0    
84.2    
84.4    
84.5    
84.7    
84.8    
85.0    
85.1    
85.3    
85.4    
85.6    
85.8    
85.9    
86.1    
86.2    
86.4    
86.5    
86.7    
86.9    
87.0    
87.2    
87.3    
87.5    
87.6    
87.8    
87.9    
88.1    
88.3    
88.4    
88.6    
88.7    
88.9    
89.0    
89.2    
89.4    
89.5    
89.7    
89.8    
90.0    
90.1    
90.3    
90.5    
90.6    
90.8    
90.9    
91.1    
91.2    
91.4    
91.5    
91.7    
91.9    
92.0    
92.2    
92.3    
92.5    
92.6    
92.8    
93.0    
93.1    
93.3    
93.4    
93.6    
93.7    
93.9    
94.1    
94.2    
94.4    
94.5    
94.7    
94.8    
95.0    
95.1    
95.3    
95.5    
95.6    
95.8    
95.9    
96.1    
96.2    
96.4    
96.6    
96.7    
96.9    
97.0    
97.2    
97.3    
97.5    
97.7    
97.8    
98.0    
98.1    
98.3    
98.4    
98.6    
98.7    
98.9    
99.1    
99.2    
99.4    
99.5    
99.7    
99.8    
-found 29 predictions from path traversal
Error with prediction: snap lend_intergenic: 47530, rend_intergenic: 28124  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 56160, rend_intergenic: 54498  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 77805, rend_intergenic: 73342  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 96648, rend_intergenic: 92718  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 101215, rend_intergenic: 96933  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 116875, rend_intergenic: 105823  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 141651, rend_intergenic: 126782  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 169969, rend_intergenic: 144503  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 190889, rend_intergenic: 187955  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 201121, rend_intergenic: 194777  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 206483, rend_intergenic: 204112  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 237022, rend_intergenic: 223371  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 24 predictions persist after filtering for low support