-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_1/scaffold_1_7527341-7798205

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GlimmerHMM_glimmerT_1082-T1
Valid prediction for snap_scaffold_1-snap.1326-T1
Valid prediction for snap_scaffold_1-snap.1352-T1
Valid prediction for Augustus_model.g787.t1
Valid prediction for HiQ_model.g811.t1
Valid prediction for snap_scaffold_1-snap.1362-T1
Couldn't classify 4213, 4386
Couldn't classify 7217, 7311
Sorry, prediction pasa_asmbl_1902.p1 fails validation.
(GTG)	 AT	4213-4386	GT	GGG
(ATA)	 AG	4943-5044	GT	AGG
(GGT)	 AG	5404-5463	GT	AGG
(TCT)	 AG	5733-5802	GT	AGG
(GAC)	 AG	7217-7311	TA	ACT
-recovered pasa_asmbl_1902.p1, internal, 4943, 5044
-recovered pasa_asmbl_1902.p1, internal, 5404, 5463
-recovered pasa_asmbl_1902.p1, internal, 5733, 5802
Valid prediction for CodingQuarry_transcript_2700-T1
Valid prediction for HiQ_model.g814.t1
Valid prediction for snap_scaffold_1-snap.1348-T1
Valid prediction for Augustus_model.g802.t1
Valid prediction for Augustus_model.g779.t1
Couldn't classify 266154, 266379
Sorry, prediction pasa_asmbl_1920.p1 fails validation.
(TTA)	 AA	266154-266379	GT	GGG
(GCT)	 AG	267877-268004	GG	GAG
-recovered pasa_asmbl_1920.p1, terminal, 267877, 268004
Valid prediction for snap_scaffold_1-snap.1322-T1
Valid prediction for GlimmerHMM_glimmerT_1077-T1
Valid prediction for snap_scaffold_1-snap.1330-T1
Valid prediction for GlimmerHMM_glimmerT_1062-T1
Valid prediction for pasa_asmbl_1915.p1
Valid prediction for snap_scaffold_1-snap.1356-T1
Valid prediction for GlimmerHMM_glimmerT_1042-T1
Valid prediction for Augustus_model.g812.t1
Valid prediction for snap_scaffold_1-snap.1343-T1
Valid prediction for GlimmerHMM_glimmerT_1049-T1
Valid prediction for GlimmerHMM_glimmerT_1085-T1
Valid prediction for snap_scaffold_1-snap.1366-T1
Valid prediction for GlimmerHMM_glimmerT_1051-T1
Valid prediction for GlimmerHMM_glimmerT_1064-T1
Valid prediction for snap_scaffold_1-snap.1365-T1
Valid prediction for CodingQuarry_transcript_2698-T1
Valid prediction for snap_scaffold_1-snap.1317-T1
Valid prediction for snap_scaffold_1-snap.1319-T1
Valid prediction for snap_scaffold_1-snap.1332-T1
Valid prediction for GlimmerHMM_glimmerT_1069-T1
Valid prediction for snap_scaffold_1-snap.1357-T1
Valid prediction for snap_scaffold_1-snap.1340-T1
Valid prediction for snap_scaffold_1-snap.1339-T1
Valid prediction for Augustus_model.g778.t1
Valid prediction for snap_scaffold_1-snap.1309-T1
Valid prediction for GlimmerHMM_glimmerT_1055-T1
Valid prediction for GlimmerHMM_glimmerT_1066-T1
Valid prediction for Augustus_model.g792.t1
Valid prediction for GlimmerHMM_glimmerT_1087-T1
Valid prediction for Augustus_model.g783.t1
Valid prediction for snap_scaffold_1-snap.1342-T1
Valid prediction for GlimmerHMM_glimmerT_1083-T1
Valid prediction for GlimmerHMM_glimmerT_1084-T1
Valid prediction for GlimmerHMM_glimmerT_1067-T1
Valid prediction for Augustus_model.g808.t1
Valid prediction for Augustus_model.g803.t1
Valid prediction for HiQ_model.g774.t1
Valid prediction for GlimmerHMM_glimmerT_1080-T1
Valid prediction for snap_scaffold_1-snap.1310-T1
Valid prediction for snap_scaffold_1-snap.1316-T1
Valid prediction for GlimmerHMM_glimmerT_1041-T1
Valid prediction for CodingQuarry_transcript_2697-T1
Valid prediction for Augustus_model.g793.t1
Valid prediction for snap_scaffold_1-snap.1337-T1
Valid prediction for GlimmerHMM_glimmerT_1040-T1
Valid prediction for snap_scaffold_1-snap.1314-T1
Couldn't classify 65477, 65564
Sorry, prediction pasa_asmbl_1906.p1 fails validation.
(TCT)	 AC	65477-65564	GT	AGG
(GAA)	 AG	65965-66002	GT	AGG
(ATG)	 AG	66642-66721	GT	AAG
(AGC)	 AG	69588-69632	GT	AGG
(GCG)	 AG	70327-70371	GT	AAG
(AGC)	 AG	71055-71098	GT	AGG
(GTT)	 AG	71395-71481	GT	AGG
(AGA)	 AG	72749-72834	GT	TGG
(GAG)	 AG	72929-73049	GT	AGG
(GTG)	 AG	73544-73638	GT	AGG
(GGC)	 AG	74791-74911	GT	CGG
(CGT)	 AG	76603-76691	GT	AGG
(GTC)	 AG	77845-77934	CC	AAC
-recovered pasa_asmbl_1906.p1, initial, 66642, 66721
-recovered pasa_asmbl_1906.p1, terminal, 72929, 73049
-recovered pasa_asmbl_1906.p1, terminal, 77845, 77934
-recovered pasa_asmbl_1906.p1, internal, 65965, 66002
-recovered pasa_asmbl_1906.p1, internal, 66642, 66721
-recovered pasa_asmbl_1906.p1, internal, 69588, 69632
-recovered pasa_asmbl_1906.p1, internal, 70327, 70371
-recovered pasa_asmbl_1906.p1, internal, 71055, 71098
-recovered pasa_asmbl_1906.p1, internal, 71395, 71481
-recovered pasa_asmbl_1906.p1, internal, 72749, 72834
-recovered pasa_asmbl_1906.p1, internal, 72929, 73049
-recovered pasa_asmbl_1906.p1, internal, 73544, 73638
-recovered pasa_asmbl_1906.p1, internal, 74791, 74911
-recovered pasa_asmbl_1906.p1, internal, 76603, 76691
Valid prediction for snap_scaffold_1-snap.1370-T1
Valid prediction for snap_scaffold_1-snap.1355-T1
Valid prediction for GlimmerHMM_glimmerT_1088-T1
Valid prediction for pasa_asmbl_1917.p1
Valid prediction for snap_scaffold_1-snap.1346-T1
Valid prediction for pasa_asmbl_1919.p1
Couldn't classify 180009, 180082
Sorry, prediction CodingQuarry_transcript_2699-T1 fails validation.
(ATG)	 CC	176332-176372	GT	GGG
(GTT)	 AG	177982-178075	GT	AGG
(GCA)	 AG	178498-178590	GT	CGG
(CCC)	 AG	178911-178958	GT	AGG
(GAC)	 AG	179160-179315	GT	AGG
(GGT)	 AG	179653-179802	GT	AGG
(GGA)	 AG	180009-180082	GG	ATG
(GGT)	 AG	180310-180379	GG	GAG
-recovered CodingQuarry_transcript_2699-T1, initial, 176332, 176372
-recovered CodingQuarry_transcript_2699-T1, terminal, 180310, 180379
-recovered CodingQuarry_transcript_2699-T1, internal, 177982, 178075
-recovered CodingQuarry_transcript_2699-T1, internal, 178498, 178590
-recovered CodingQuarry_transcript_2699-T1, internal, 178911, 178958
-recovered CodingQuarry_transcript_2699-T1, internal, 179160, 179315
-recovered CodingQuarry_transcript_2699-T1, internal, 179653, 179802
Valid prediction for snap_scaffold_1-snap.1325-T1
Valid prediction for GlimmerHMM_glimmerT_1059-T1
Valid prediction for GlimmerHMM_glimmerT_1046-T1
Valid prediction for snap_scaffold_1-snap.1307-T1
Valid prediction for GlimmerHMM_glimmerT_1068-T1
Valid prediction for Augustus_model.g775.t1
Valid prediction for snap_scaffold_1-snap.1358-T1
Valid prediction for HiQ_model.g790.t1
Valid prediction for Augustus_model.g804.t1
Valid prediction for GlimmerHMM_glimmerT_1071-T1
Valid prediction for GlimmerHMM_glimmerT_1089-T1
Valid prediction for Augustus_model.g813.t1
Valid prediction for GlimmerHMM_glimmerT_1076-T1
Valid prediction for snap_scaffold_1-snap.1350-T1
Valid prediction for pasa_asmbl_1909.p1
Valid prediction for snap_scaffold_1-snap.1369-T1
Valid prediction for HiQ_model.g794.t1
Valid prediction for snap_scaffold_1-snap.1364-T1
Valid prediction for GlimmerHMM_glimmerT_1052-T1
Valid prediction for snap_scaffold_1-snap.1344-T1
Valid prediction for snap_scaffold_1-snap.1336-T1
Valid prediction for pasa_asmbl_1916.p2
Valid prediction for Augustus_model.g810.t1
Valid prediction for snap_scaffold_1-snap.1351-T1
Valid prediction for Augustus_model.g782.t1
Valid prediction for snap_scaffold_1-snap.1320-T1
Couldn't classify 151027, 151515
Sorry, prediction pasa_asmbl_1910.p1 fails validation.
(ATG)	 AT	151027-151515	AA	AAA
Valid prediction for Augustus_model.g797.t1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GlimmerHMM_glimmerT_1045-T1
Valid prediction for GlimmerHMM_glimmerT_1072-T1
Valid prediction for GlimmerHMM_glimmerT_1053-T1
Valid prediction for snap_scaffold_1-snap.1338-T1
Valid prediction for GlimmerHMM_glimmerT_1058-T1
Couldn't classify 121636, 121693
Sorry, prediction pasa_asmbl_1355.p1 fails validation.
(CCA)	 CT	121636-121693	GT	AAG
(TTT)	 AG	122127-122185	GT	AGG
(TTA)	 AG	122324-122427	GT	AGG
(ATT)	 AG	122615-122696	GT	AGG
(GTC)	 AG	122806-122873	GT	GAG
(ATA)	 AG	123182-123333	GT	GGG
(GAG)	 AG	123589-123665	GT	TGG
(AAA)	 AG	123804-123947	GA	GAG
-recovered pasa_asmbl_1355.p1, terminal, 123804, 123947
-recovered pasa_asmbl_1355.p1, internal, 122127, 122185
-recovered pasa_asmbl_1355.p1, internal, 122324, 122427
-recovered pasa_asmbl_1355.p1, internal, 122615, 122696
-recovered pasa_asmbl_1355.p1, internal, 122806, 122873
-recovered pasa_asmbl_1355.p1, internal, 123182, 123333
-recovered pasa_asmbl_1355.p1, internal, 123589, 123665
Valid prediction for Augustus_model.g799.t1
Valid prediction for GlimmerHMM_glimmerT_1044-T1
Valid prediction for GlimmerHMM_glimmerT_1056-T1
Valid prediction for GlimmerHMM_glimmerT_1043-T1
Valid prediction for GlimmerHMM_glimmerT_1063-T1
Valid prediction for snap_scaffold_1-snap.1368-T1
Valid prediction for snap_scaffold_1-snap.1311-T1
Valid prediction for GlimmerHMM_glimmerT_1061-T1
Valid prediction for snap_scaffold_1-snap.1363-T1
Valid prediction for GlimmerHMM_glimmerT_1048-T1
Valid prediction for Augustus_model.g805.t1
Valid prediction for Augustus_model.g781.t1
Valid prediction for snap_scaffold_1-snap.1353-T1
Valid prediction for snap_scaffold_1-snap.1323-T1
Valid prediction for Augustus_model.g809.t1
Valid prediction for snap_scaffold_1-snap.1360-T1
Valid prediction for snap_scaffold_1-snap.1329-T1
Valid prediction for snap_scaffold_1-snap.1335-T1
Valid prediction for snap_scaffold_1-snap.1328-T1
Valid prediction for Augustus_model.g801.t1
Valid prediction for GlimmerHMM_glimmerT_1073-T1
Valid prediction for Augustus_model.g780.t1
Valid prediction for snap_scaffold_1-snap.1321-T1
Valid prediction for snap_scaffold_1-snap.1349-T1
Valid prediction for GlimmerHMM_glimmerT_1079-T1
Valid prediction for GlimmerHMM_glimmerT_1054-T1
Valid prediction for GlimmerHMM_glimmerT_1060-T1
Valid prediction for GlimmerHMM_glimmerT_1075-T1
Valid prediction for snap_scaffold_1-snap.1361-T1
Valid prediction for snap_scaffold_1-snap.1345-T1
Sorry, intron length (6) is less than minimum required (10)
Valid prediction for snap_scaffold_1-snap.1331-T1
Valid prediction for HiQ_model.g791.t1
Valid prediction for snap_scaffold_1-snap.1306-T1
Valid prediction for Augustus_model.g806.t1
Valid prediction for Augustus_model.g785.t1
Valid prediction for Augustus_model.g786.t1
Valid prediction for Augustus_model.g788.t1
Valid prediction for snap_scaffold_1-snap.1333-T1
Valid prediction for snap_scaffold_1-snap.1308-T1
Valid prediction for GlimmerHMM_glimmerT_1057-T1
Valid prediction for snap_scaffold_1-snap.1341-T1
Valid prediction for snap_scaffold_1-snap.1315-T1
Valid prediction for snap_scaffold_1-snap.1334-T1
Valid prediction for snap_scaffold_1-snap.1313-T1
Valid prediction for Augustus_model.g784.t1
Valid prediction for Augustus_model.g798.t1
Valid prediction for snap_scaffold_1-snap.1347-T1
Valid prediction for Augustus_model.g776.t1
Valid prediction for snap_scaffold_1-snap.1327-T1
Valid prediction for GlimmerHMM_glimmerT_1065-T1
Valid prediction for GlimmerHMM_glimmerT_1078-T1
Valid prediction for snap_scaffold_1-snap.1367-T1
Valid prediction for snap_scaffold_1-snap.1354-T1
Valid prediction for Augustus_model.g807.t1
Valid prediction for Augustus_model.g796.t1
Valid prediction for GlimmerHMM_glimmerT_1081-T1
Valid prediction for GlimmerHMM_glimmerT_1070-T1
Valid prediction for Augustus_model.g795.t1
Valid prediction for snap_scaffold_1-snap.1324-T1
Valid prediction for snap_scaffold_1-snap.1359-T1
Valid prediction for GlimmerHMM_glimmerT_1047-T1
Valid prediction for Augustus_model.g789.t1
Valid prediction for GlimmerHMM_glimmerT_1086-T1
Valid prediction for snap_scaffold_1-snap.1371-T1
Valid prediction for snap_scaffold_1-snap.1318-T1
Valid prediction for Augustus_model.g800.t1
Valid prediction for snap_scaffold_1-snap.1312-T1
Valid prediction for Augustus_model.g777.t1
Valid prediction for GlimmerHMM_glimmerT_1074-T1
Valid prediction for GlimmerHMM_glimmerT_1050-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 16603, rend_intergenic: 12743  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 29227, rend_intergenic: 20245  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 30617, rend_intergenic: 30185  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 37811, rend_intergenic: 32916  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 38058, rend_intergenic: 37907  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 49548, rend_intergenic: 44664  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 50820, rend_intergenic: 49663  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 75379, rend_intergenic: 57727  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 79944, rend_intergenic: 75837  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 92094, rend_intergenic: 83677  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 102802, rend_intergenic: 93234  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 106948, rend_intergenic: 102839  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 107647, rend_intergenic: 107641  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 132322, rend_intergenic: 121667  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 139566, rend_intergenic: 134084  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 164326, rend_intergenic: 163336  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 165936, rend_intergenic: 165004  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 180506, rend_intergenic: 177948  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 258664, rend_intergenic: 250734  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 268004, rend_intergenic: 265396  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 270865
-exon list size: 590


building trellis

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58.3    
58.4    
58.6    
58.8    
59.0    
59.1    
59.3    
59.5    
59.6    
59.8    
60.0    
60.1    
60.3    
60.5    
60.6    
60.8    
61.0    
61.1    
61.3    
61.5    
61.7    
61.8    
62.0    
62.2    
62.3    
62.5    
62.7    
62.8    
63.0    
63.2    
63.3    
63.5    
63.7    
63.9    
64.0    
64.2    
64.4    
64.5    
64.7    
64.9    
65.0    
65.2    
65.4    
65.5    
65.7    
65.9    
66.0    
66.2    
66.4    
66.6    
66.7    
66.9    
67.1    
67.2    
67.4    
67.6    
67.7    
67.9    
68.1    
68.2    
68.4    
68.6    
68.8    
68.9    
69.1    
69.3    
69.4    
69.6    
69.8    
69.9    
70.1    
70.3    
70.4    
70.6    
70.8    
70.9    
71.1    
71.3    
71.5    
71.6    
71.8    
72.0    
72.1    
72.3    
72.5    
72.6    
72.8    
73.0    
73.1    
73.3    
73.5    
73.6    
73.8    
74.0    
74.2    
74.3    
74.5    
74.7    
74.8    
75.0    
75.2    
75.3    
75.5    
75.7    
75.8    
76.0    
76.2    
76.4    
76.5    
76.7    
76.9    
77.0    
77.2    
77.4    
77.5    
77.7    
77.9    
78.0    
78.2    
78.4    
78.5    
78.7    
78.9    
79.1    
79.2    
79.4    
79.6    
79.7    
79.9    
80.1    
80.2    
80.4    
80.6    
80.7    
80.9    
81.1    
81.2    
81.4    
81.6    
81.8    
81.9    
82.1    
82.3    
82.4    
82.6    
82.8    
82.9    
83.1    
83.3    
83.4    
83.6    
83.8    
84.0    
84.1    
84.3    
84.5    
84.6    
84.8    
85.0    
85.1    
85.3    
85.5    
85.6    
85.8    
86.0    
86.1    
86.3    
86.5    
86.7    
86.8    
87.0    
87.2    
87.3    
87.5    
87.7    
87.8    
88.0    
88.2    
88.3    
88.5    
88.7    
88.9    
89.0    
89.2    
89.4    
89.5    
89.7    
89.9    
90.0    
90.2    
90.4    
90.5    
90.7    
90.9    
91.0    
91.2    
91.4    
91.6    
91.7    
91.9    
92.1    
92.2    
92.4    
92.6    
92.7    
92.9    
93.1    
93.2    
93.4    
93.6    
93.8    
93.9    
94.1    
94.3    
94.4    
94.6    
94.8    
94.9    
95.1    
95.3    
95.4    
95.6    
95.8    
95.9    
96.1    
96.3    
96.5    
96.6    
96.8    
97.0    
97.1    
97.3    
97.5    
97.6    
97.8    
98.0    
98.1    
98.3    
98.5    
98.6    
98.8    
99.0    
99.2    
99.3    
99.5    
99.7    
99.8    
-found 51 predictions from path traversal
Error with prediction: snap lend_intergenic: 16603, rend_intergenic: 12743  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 29227, rend_intergenic: 20245  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 30617, rend_intergenic: 30185  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 37811, rend_intergenic: 32916  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 38058, rend_intergenic: 37907  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 49548, rend_intergenic: 44664  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 50820, rend_intergenic: 49663  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 75379, rend_intergenic: 57727  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 79944, rend_intergenic: 75837  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 92094, rend_intergenic: 83677  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 102802, rend_intergenic: 93234  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 106948, rend_intergenic: 102839  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 107647, rend_intergenic: 107641  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 132322, rend_intergenic: 121667  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 139566, rend_intergenic: 134084  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 164326, rend_intergenic: 163336  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 165936, rend_intergenic: 165004  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 180506, rend_intergenic: 177948  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 258664, rend_intergenic: 250734  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 268004, rend_intergenic: 265396  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 37 predictions persist after filtering for low support