-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_1/scaffold_1_14311694-14607310 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_1-snap.2475-T1 Valid prediction for GlimmerHMM_glimmerT_1877-T1 Valid prediction for snap_scaffold_1-snap.2500-T1 Valid prediction for snap_scaffold_1-snap.2481-T1 Valid prediction for GlimmerHMM_glimmerT_1876-T1 Valid prediction for pasa_asmbl_2774.p1 Couldn't classify 15306, 15309 Couldn't classify 16492, 17562 Sorry, prediction pasa_asmbl_2384.p1 fails validation. (TCA) AG 15306-15309 GT AAG (TGG) AG 15423-15515 GT AAG (CCT) AG 15605-15801 GT CAG (TTA) AG 15921-16079 GT AAG (TCC) AG 16282-16398 GT GGG (GAG) AG 16492-17562 CC CCC -recovered pasa_asmbl_2384.p1, internal, 15306, 15309 -recovered pasa_asmbl_2384.p1, internal, 15423, 15515 -recovered pasa_asmbl_2384.p1, internal, 15605, 15801 -recovered pasa_asmbl_2384.p1, internal, 15921, 16079 -recovered pasa_asmbl_2384.p1, internal, 16282, 16398 Valid prediction for HiQ_model.g1421.t1 Valid prediction for snap_scaffold_1-snap.2465-T1 Couldn't classify 36276, 36587 Sorry, prediction pasa_asmbl_892.p2 fails validation. (TTG) CC 36276-36587 CA AAC Valid prediction for snap_scaffold_1-snap.2478-T1 Valid prediction for pasa_asmbl_2390.p1 Valid prediction for snap_scaffold_1-snap.2484-T1 Valid prediction for GlimmerHMM_glimmerT_1872-T1 Valid prediction for snap_scaffold_1-snap.2450-T1 Couldn't classify 7536, 7608 Sorry, prediction pasa_asmbl_2379.p1 fails validation. (TCG) AC 7536-7608 GT AGG (GGT) AG 8517-8615 GT AGG (GGC) AG 8804-8899 GT AGG (GTG) AG 9551-9609 GT AGG (GAT) AG 9876-9945 GT GTG (CCA) AG 10033-10166 GT CGG (GCC) AG 10299-10521 GT AGG (CTT) AG 10666-10863 GT AGG (TTG) AG 11081-11282 GT GCG (GTG) AG 11418-11526 GT AGG (ATA) AG 11630-11688 GT AGG (AAT) AG 12045-12114 AG AGA -recovered pasa_asmbl_2379.p1, terminal, 12045, 12114 -recovered pasa_asmbl_2379.p1, internal, 8517, 8615 -recovered pasa_asmbl_2379.p1, internal, 8804, 8899 -recovered pasa_asmbl_2379.p1, internal, 9551, 9609 -recovered pasa_asmbl_2379.p1, internal, 9876, 9945 -recovered pasa_asmbl_2379.p1, internal, 10033, 10166 -recovered pasa_asmbl_2379.p1, internal, 10299, 10521 -recovered pasa_asmbl_2379.p1, internal, 10666, 10863 -recovered pasa_asmbl_2379.p1, internal, 11081, 11282 -recovered pasa_asmbl_2379.p1, internal, 11418, 11526 -recovered pasa_asmbl_2379.p1, internal, 11630, 11688 Valid prediction for snap_scaffold_1-snap.2456-T1 Valid prediction for snap_scaffold_1-snap.2493-T1 Valid prediction for CodingQuarry_transcript_2913-T1 Couldn't classify 117022, 117270 Sorry, prediction pasa_asmbl_2394.p1 fails validation. (TTT) GT 117022-117270 GT AGG (AAT) AG 117357-117500 GT AGG (GAT) AG 117617-117787 GT AGG (GGG) AG 117923-118068 GT CGG (TAT) AG 118315-118507 GT AGG (GAG) AG 118669-118887 GA GAG -recovered pasa_asmbl_2394.p1, terminal, 118669, 118887 -recovered pasa_asmbl_2394.p1, internal, 117357, 117500 -recovered pasa_asmbl_2394.p1, internal, 117617, 117787 -recovered pasa_asmbl_2394.p1, internal, 117923, 118068 -recovered pasa_asmbl_2394.p1, internal, 118315, 118507 Valid prediction for Augustus_model.g1416.t1 Valid prediction for snap_scaffold_1-snap.2460-T1 Valid prediction for pasa_asmbl_2399.p1 Valid prediction for GlimmerHMM_glimmerT_1886-T1 Valid prediction for snap_scaffold_1-snap.2486-T1 Valid prediction for GlimmerHMM_glimmerT_1883-T1 Valid prediction for CodingQuarry_transcript_2922-T1 Valid prediction for snap_scaffold_1-snap.2463-T1 Valid prediction for HiQ_model.g1426.t1 Valid prediction for GlimmerHMM_glimmerT_1870-T1 Valid prediction for GlimmerHMM_glimmerT_1898-T1 Valid prediction for Augustus_model.g1441.t1 Valid prediction for snap_scaffold_1-snap.2452-T1 Valid prediction for snap_scaffold_1-snap.2462-T1 Valid prediction for Augustus_model.g1413.t1 Valid prediction for CodingQuarry_transcript_2915-T1 Couldn't classify 45319, 45507 Sorry, prediction pasa_asmbl_2389.p1 fails validation. (GAG) TA 45319-45507 GT AGG (AGT) AG 45682-45792 GT AAG (GCC) AG 45967-46377 GT ATG (ATA) AG 46465-46519 GT GGG (CCT) AG 46622-46767 GT TGG (AAT) AG 46857-46883 AG GAA -recovered pasa_asmbl_2389.p1, terminal, 46857, 46883 -recovered pasa_asmbl_2389.p1, internal, 45682, 45792 -recovered pasa_asmbl_2389.p1, internal, 45967, 46377 -recovered pasa_asmbl_2389.p1, internal, 46465, 46519 -recovered pasa_asmbl_2389.p1, internal, 46622, 46767 Valid prediction for snap_scaffold_1-snap.2477-T1 Valid prediction for GlimmerHMM_glimmerT_1875-T1 Valid prediction for snap_scaffold_1-snap.2479-T1 Valid prediction for GlimmerHMM_glimmerT_1881-T1 Valid prediction for snap_scaffold_1-snap.2498-T1 Valid prediction for HiQ_model.g1412.t1 Valid prediction for snap_scaffold_1-snap.2502-T1 Valid prediction for snap_scaffold_1-snap.2480-T1 Valid prediction for Augustus_model.g1418.t1 Valid prediction for GlimmerHMM_glimmerT_1884-T1 Valid prediction for HiQ_model.g1420.t1 Valid prediction for pasa_asmbl_2392.p1 Valid prediction for snap_scaffold_1-snap.2466-T1 Valid prediction for snap_scaffold_1-snap.2458-T1 Valid prediction for CodingQuarry_transcript_2909-T1 Couldn't classify 43067, 43075 Couldn't classify 43440, 43592 Sorry, prediction pasa_asmbl_2386.p1 fails validation. (CTT) GA 43067-43075 GT AGG (GTG) AG 43180-43344 GT ATG (ACT) AG 43440-43592 GT CAG -recovered pasa_asmbl_2386.p1, internal, 43180, 43344 -recovered pasa_asmbl_2386.p1, internal, 43440, 43592 Valid prediction for snap_scaffold_1-snap.2461-T1 Valid prediction for GlimmerHMM_glimmerT_1900-T1 Valid prediction for GlimmerHMM_glimmerT_1885-T1 Valid prediction for Augustus_model.g1432.t1 Valid prediction for snap_scaffold_1-snap.2497-T1 Valid prediction for pasa_asmbl_2790.p1 Valid prediction for GlimmerHMM_glimmerT_1868-T1 Valid prediction for Augustus_model.g1430.t1 Valid prediction for snap_scaffold_1-snap.2474-T1 Valid prediction for snap_scaffold_1-snap.2464-T1 Valid prediction for GlimmerHMM_glimmerT_1896-T1 Valid prediction for GlimmerHMM_glimmerT_1874-T1 Valid prediction for snap_scaffold_1-snap.2495-T1 Valid prediction for HiQ_model.g1428.t1 Valid prediction for CodingQuarry_transcript_2921-T1 Valid prediction for Augustus_model.g1429.t1 Valid prediction for snap_scaffold_1-snap.2451-T1 -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_1-snap.2459-T1 Valid prediction for snap_scaffold_1-snap.2489-T1 Couldn't classify 69304, 69326 Sorry, prediction pasa_asmbl_937.p1 fails validation. (ATG) AC 68464-68488 GT TGG (ATG) AG 68585-68679 GT ATG (GTG) AG 68828-69071 GT AGG (GTG) AG 69304-69326 TG ATT -recovered pasa_asmbl_937.p1, initial, 68464, 68488 add_exon() Sorry, pasa_asmbl_937.p1 68585-68679-initial-1 is invalid. -recovered pasa_asmbl_937.p1, initial, 68585, 68679 -recovered pasa_asmbl_937.p1, internal, 68585, 68679 -recovered pasa_asmbl_937.p1, internal, 68828, 69071 Valid prediction for Augustus_model.g1419.t1 Valid prediction for snap_scaffold_1-snap.2483-T1 Valid prediction for pasa_asmbl_888.p1 Valid prediction for GlimmerHMM_glimmerT_1892-T1 Valid prediction for HiQ_model.g1415.t1 Valid prediction for pasa_asmbl_916.p1 Valid prediction for HiQ_model.g1436.t1 Valid prediction for CodingQuarry_transcript_2923-T1 Valid prediction for HiQ_model.g1425.t1 Valid prediction for GlimmerHMM_glimmerT_1890-T1 Couldn't classify 89815, 89816 Sorry, prediction pasa_asmbl_927.p1 fails validation. (ATG) GC 89815-89816 GT ATG (GGA) AG 89890-89994 GT AAG (GAC) AG 90103-90265 GT AGG (ATT) AG 90458-90568 GT AGG (GCA) AG 90738-90866 GT AGG (ATT) AG 91004-91120 GT AGG (ACA) AG 91470-91638 GT AAG (TGA) AG 91767-91892 GT CGG (GAG) AG 92000-92181 GT AGG (GGT) AG 92412-92597 GT GGG (AGT) AG 92715-92854 GT AGG (AGG) AG 92998-93158 GT GGG (AGG) AG 93256-93282 GT AAG (GTT) AG 93390-93449 GT TGG (TGG) AG 93562-93675 GT AGG (GTC) AG 93791-93992 GT ACG (TGT) AG 94127-94299 GT AGG (GCC) AG 94421-94532 GT AGG (GGG) AG 94638-94767 GA GAG add_exon() Sorry, pasa_asmbl_927.p1 94127-94299-terminal-2 is invalid. -recovered pasa_asmbl_927.p1, terminal, 94127, 94299 -recovered pasa_asmbl_927.p1, terminal, 94638, 94767 -recovered pasa_asmbl_927.p1, internal, 89890, 89994 -recovered pasa_asmbl_927.p1, internal, 90103, 90265 -recovered pasa_asmbl_927.p1, internal, 90458, 90568 -recovered pasa_asmbl_927.p1, internal, 90738, 90866 -recovered pasa_asmbl_927.p1, internal, 91004, 91120 -recovered pasa_asmbl_927.p1, internal, 91470, 91638 -recovered pasa_asmbl_927.p1, internal, 91767, 91892 -recovered pasa_asmbl_927.p1, internal, 92000, 92181 -recovered pasa_asmbl_927.p1, internal, 92412, 92597 -recovered pasa_asmbl_927.p1, internal, 92715, 92854 -recovered pasa_asmbl_927.p1, internal, 92998, 93158 -recovered pasa_asmbl_927.p1, internal, 93256, 93282 -recovered pasa_asmbl_927.p1, internal, 93390, 93449 -recovered pasa_asmbl_927.p1, internal, 93562, 93675 -recovered pasa_asmbl_927.p1, internal, 93791, 93992 -recovered pasa_asmbl_927.p1, internal, 94127, 94299 -recovered pasa_asmbl_927.p1, internal, 94421, 94532 Valid prediction for Augustus_model.g1438.t1 Valid prediction for snap_scaffold_1-snap.2492-T1 Valid prediction for pasa_asmbl_915.p1 Valid prediction for GlimmerHMM_glimmerT_1871-T1 Valid prediction for HiQ_model.g1427.t1 Valid prediction for GlimmerHMM_glimmerT_1889-T1 Valid prediction for HiQ_model.g1434.t1 Valid prediction for snap_scaffold_1-snap.2494-T1 Valid prediction for GlimmerHMM_glimmerT_1878-T1 Couldn't classify 60288, 60453 Sorry, prediction pasa_asmbl_939.p1 fails validation. (ACA) AC 60288-60453 GT AGG (AAT) AG 60559-60659 GT AGG (AAA) AG 60765-60852 GT AGG (GCA) AG 61014-61141 GT AGG (GTC) AG 61314-61487 GT AGG (GAG) AG 61569-61660 GT ACG (GTT) AG 61826-62027 GT AGG (ATT) AG 62118-62306 GT AGG (TTG) AG 62509-62637 GT TGG (AAA) AG 63012-63170 CC AAC -recovered pasa_asmbl_939.p1, terminal, 63012, 63170 -recovered pasa_asmbl_939.p1, internal, 60559, 60659 -recovered pasa_asmbl_939.p1, internal, 60765, 60852 -recovered pasa_asmbl_939.p1, internal, 61014, 61141 -recovered pasa_asmbl_939.p1, internal, 61314, 61487 -recovered pasa_asmbl_939.p1, internal, 61569, 61660 -recovered pasa_asmbl_939.p1, internal, 61826, 62027 -recovered pasa_asmbl_939.p1, internal, 62118, 62306 -recovered pasa_asmbl_939.p1, internal, 62509, 62637 Valid prediction for Augustus_model.g1431.t1 Valid prediction for snap_scaffold_1-snap.2468-T1 Valid prediction for HiQ_model.g1440.t1 Valid prediction for pasa_asmbl_908.p1 Valid prediction for Augustus_model.g1414.t1 Valid prediction for pasa_asmbl_913.p1 Valid prediction for snap_scaffold_1-snap.2482-T1 Valid prediction for GlimmerHMM_glimmerT_1887-T1 Valid prediction for GlimmerHMM_glimmerT_1879-T1 Valid prediction for snap_scaffold_1-snap.2490-T1 Valid prediction for GlimmerHMM_glimmerT_1894-T1 Valid prediction for CodingQuarry_transcript_2925-T1 Valid prediction for CodingQuarry_transcript_2912-T1 Couldn't classify 264234, 264252 Sorry, prediction pasa_asmbl_891.p1 fails validation. (ACC) CT 264234-264252 GT TGG (GTG) AG 264444-264578 GT ATG (CCT) AG 264681-264706 GT CAG (GCT) AG 264803-264833 GT AGG (GAA) AG 265059-265162 AA AAA -recovered pasa_asmbl_891.p1, terminal, 265059, 265162 -recovered pasa_asmbl_891.p1, internal, 264444, 264578 -recovered pasa_asmbl_891.p1, internal, 264681, 264706 -recovered pasa_asmbl_891.p1, internal, 264803, 264833 Valid prediction for snap_scaffold_1-snap.2467-T1 Valid prediction for GlimmerHMM_glimmerT_1869-T1 Valid prediction for snap_scaffold_1-snap.2473-T1 Valid prediction for snap_scaffold_1-snap.2455-T1 Valid prediction for snap_scaffold_1-snap.2476-T1 Valid prediction for pasa_asmbl_893.p1 Couldn't classify 77598, 77691 Sorry, prediction pasa_asmbl_933.p1 fails validation. (TCC) CG 77598-77691 GT CGG (GTG) AG 77877-77989 GT AGG (CTG) AG 78101-78178 GT ACG (GCC) AG 78434-78583 GT AGG (ATA) AG 80706-80819 CC GAC -recovered pasa_asmbl_933.p1, terminal, 80706, 80819 -recovered pasa_asmbl_933.p1, internal, 77877, 77989 -recovered pasa_asmbl_933.p1, internal, 78101, 78178 -recovered pasa_asmbl_933.p1, internal, 78434, 78583 Valid prediction for pasa_asmbl_926.p1 Valid prediction for GlimmerHMM_glimmerT_1895-T1 Valid prediction for snap_scaffold_1-snap.2503-T1 Valid prediction for CodingQuarry_transcript_2914-T1 Valid prediction for snap_scaffold_1-snap.2471-T1 Valid prediction for GlimmerHMM_glimmerT_1882-T1 Valid prediction for GlimmerHMM_glimmerT_1897-T1 Valid prediction for CodingQuarry_transcript_2926-T1 Valid prediction for CodingQuarry_transcript_2920-T1 Valid prediction for HiQ_model.g1417.t1 Valid prediction for Augustus_model.g1422.t1 Valid prediction for HiQ_model.g1433.t1 Valid prediction for Augustus_model.g1442.t1 Valid prediction for GlimmerHMM_glimmerT_1880-T1 Valid prediction for CodingQuarry_transcript_2916-T1 Valid prediction for snap_scaffold_1-snap.2472-T1 Valid prediction for CodingQuarry_transcript_2919-T1 Couldn't classify 37242, 37287 Sorry, prediction pasa_asmbl_941.p1 fails validation. (CTT) AC 37242-37287 GT AGG (CTG) AG 37475-37533 GT GGG (GAG) AG 38768-38839 GT GGG (GTG) AG 39322-39390 GT TGG (ATG) AG 41857-41940 GT AAG (GTC) AG 42046-42125 GT AGG (TTC) AG 42311-42407 GT AGG (GCC) AG 42538-42675 GT AGG (GTG) AG 42959-43061 GT AGG (GTG) AG 43184-43332 GT AGG (GTG) AG 43735-43836 GT AGG (GAC) AG 44203-44357 GT AGG (GTG) AG 44601-44637 CA AGC -recovered pasa_asmbl_941.p1, initial, 41857, 41940 add_exon() Sorry, pasa_asmbl_941.p1 42046-42125-terminal-2 is invalid. -recovered pasa_asmbl_941.p1, terminal, 42046, 42125 -recovered pasa_asmbl_941.p1, terminal, 44601, 44637 -recovered pasa_asmbl_941.p1, internal, 37475, 37533 -recovered pasa_asmbl_941.p1, internal, 38768, 38839 -recovered pasa_asmbl_941.p1, internal, 39322, 39390 -recovered pasa_asmbl_941.p1, internal, 41857, 41940 -recovered pasa_asmbl_941.p1, internal, 42046, 42125 -recovered pasa_asmbl_941.p1, internal, 42311, 42407 -recovered pasa_asmbl_941.p1, internal, 42538, 42675 -recovered pasa_asmbl_941.p1, internal, 42959, 43061 -recovered pasa_asmbl_941.p1, internal, 43184, 43332 -recovered pasa_asmbl_941.p1, internal, 43735, 43836 -recovered pasa_asmbl_941.p1, internal, 44203, 44357 Valid prediction for GlimmerHMM_glimmerT_1891-T1 Valid prediction for snap_scaffold_1-snap.2499-T1 Valid prediction for snap_scaffold_1-snap.2470-T1 Valid prediction for snap_scaffold_1-snap.2457-T1 Valid prediction for snap_scaffold_1-snap.2496-T1 Valid prediction for GlimmerHMM_glimmerT_1901-T1 Valid prediction for GlimmerHMM_glimmerT_1899-T1 Valid prediction for CodingQuarry_transcript_2911-T1 Valid prediction for HiQ_model.g1423.t1 Valid prediction for snap_scaffold_1-snap.2488-T1 Valid prediction for Augustus_model.g1435.t1 Valid prediction for Augustus_model.g1439.t1 Valid prediction for snap_scaffold_1-snap.2454-T1 Couldn't classify 20071, 23096 Sorry, prediction pasa_asmbl_945.p1 fails validation. (ATG) AT 18435-18444 GT AGG (ATT) AG 20071-23096 AG AAA -recovered pasa_asmbl_945.p1, initial, 18435, 18444 Valid prediction for CodingQuarry_transcript_2910-T1 Valid prediction for snap_scaffold_1-snap.2487-T1 Valid prediction for snap_scaffold_1-snap.2501-T1 Valid prediction for snap_scaffold_1-snap.2485-T1 Valid prediction for snap_scaffold_1-snap.2491-T1 Valid prediction for GlimmerHMM_glimmerT_1893-T1 Valid prediction for GlimmerHMM_glimmerT_1888-T1 Valid prediction for CodingQuarry_transcript_2917-T1 Valid prediction for pasa_asmbl_921.p2 Couldn't classify 72336, 72483 Sorry, prediction pasa_asmbl_935.p1 fails validation. (GTG) CG 72336-72483 GT CAG (CTT) AG 72652-72830 GT AGG (GGC) AG 72918-73142 GT AGG (AGC) AG 73277-73405 GT AGG (GAG) AG 73563-73703 CT AGC -recovered pasa_asmbl_935.p1, terminal, 73563, 73703 -recovered pasa_asmbl_935.p1, internal, 72652, 72830 -recovered pasa_asmbl_935.p1, internal, 72918, 73142 -recovered pasa_asmbl_935.p1, internal, 73277, 73405 Valid prediction for snap_scaffold_1-snap.2453-T1 Couldn't classify 69801, 69933 Couldn't classify 72076, 72171 Sorry, prediction pasa_asmbl_936.p1 fails validation. (CTG) GA 69801-69933 GT AGG (ACC) AG 70065-70162 GT AGG (GAC) AG 70254-70355 GC AGG (GTG) AG 70513-70672 GT AGG (GGT) AG 70823-70905 GT CAG (GAC) AG 71024-71150 GT AGG (GGC) AG 71237-71350 GT AGG (TTG) AG 71509-71551 GT CAG (CCG) AG 71663-71730 GT AGG (GAC) AG 71836-71975 GT AGG (GTG) AG 72076-72171 AC AGA -recovered pasa_asmbl_936.p1, internal, 70065, 70162 -recovered pasa_asmbl_936.p1, internal, 70254, 70355 -recovered pasa_asmbl_936.p1, internal, 70513, 70672 -recovered pasa_asmbl_936.p1, internal, 70823, 70905 -recovered pasa_asmbl_936.p1, internal, 71024, 71150 -recovered pasa_asmbl_936.p1, internal, 71237, 71350 -recovered pasa_asmbl_936.p1, internal, 71509, 71551 -recovered pasa_asmbl_936.p1, internal, 71663, 71730 -recovered pasa_asmbl_936.p1, internal, 71836, 71975 Valid prediction for HiQ_model.g1437.t1 Valid prediction for CodingQuarry_transcript_2918-T1 Valid prediction for HiQ_model.g1424.t1 Valid prediction for GlimmerHMM_glimmerT_1873-T1 Valid prediction for CodingQuarry_transcript_2924-T1 Valid prediction for snap_scaffold_1-snap.2469-T1 -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: snap lend_intergenic: 159229, rend_intergenic: 151778 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 172957, rend_intergenic: 169458 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 188291, rend_intergenic: 187137 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 255644, rend_intergenic: 250618 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 256992, rend_intergenic: 255898 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 261377, rend_intergenic: 257772 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 295617 -exon list size: 640 building trellis 0.2 0.3 0.5 0.6 0.8 0.9 1.1 1.2 1.4 1.6 1.7 1.9 2.0 2.2 2.3 2.5 2.6 2.8 3.0 3.1 3.3 3.4 3.6 3.7 3.9 4.0 4.2 4.4 4.5 4.7 4.8 5.0 5.1 5.3 5.5 5.6 5.8 5.9 6.1 6.2 6.4 6.5 6.7 6.9 7.0 7.2 7.3 7.5 7.6 7.8 7.9 8.1 8.3 8.4 8.6 8.7 8.9 9.0 9.2 9.3 9.5 9.7 9.8 10.0 10.1 10.3 10.4 10.6 10.7 10.9 11.1 11.2 11.4 11.5 11.7 11.8 12.0 12.1 12.3 12.5 12.6 12.8 12.9 13.1 13.2 13.4 13.6 13.7 13.9 14.0 14.2 14.3 14.5 14.6 14.8 15.0 15.1 15.3 15.4 15.6 15.7 15.9 16.0 16.2 16.4 16.5 16.7 16.8 17.0 17.1 17.3 17.4 17.6 17.8 17.9 18.1 18.2 18.4 18.5 18.7 18.8 19.0 19.2 19.3 19.5 19.6 19.8 19.9 20.1 20.2 20.4 20.6 20.7 20.9 21.0 21.2 21.3 21.5 21.7 21.8 22.0 22.1 22.3 22.4 22.6 22.7 22.9 23.1 23.2 23.4 23.5 23.7 23.8 24.0 24.1 24.3 24.5 24.6 24.8 24.9 25.1 25.2 25.4 25.5 25.7 25.9 26.0 26.2 26.3 26.5 26.6 26.8 26.9 27.1 27.3 27.4 27.6 27.7 27.9 28.0 28.2 28.3 28.5 28.7 28.8 29.0 29.1 29.3 29.4 29.6 29.8 29.9 30.1 30.2 30.4 30.5 30.7 30.8 31.0 31.2 31.3 31.5 31.6 31.8 31.9 32.1 32.2 32.4 32.6 32.7 32.9 33.0 33.2 33.3 33.5 33.6 33.8 34.0 34.1 34.3 34.4 34.6 34.7 34.9 35.0 35.2 35.4 35.5 35.7 35.8 36.0 36.1 36.3 36.4 36.6 36.8 36.9 37.1 37.2 37.4 37.5 37.7 37.9 38.0 38.2 38.3 38.5 38.6 38.8 38.9 39.1 39.3 39.4 39.6 39.7 39.9 40.0 40.2 40.3 40.5 40.7 40.8 41.0 41.1 41.3 41.4 41.6 41.7 41.9 42.1 42.2 42.4 42.5 42.7 42.8 43.0 43.1 43.3 43.5 43.6 43.8 43.9 44.1 44.2 44.4 44.5 44.7 44.9 45.0 45.2 45.3 45.5 45.6 45.8 46.0 46.1 46.3 46.4 46.6 46.7 46.9 47.0 47.2 47.4 47.5 47.7 47.8 48.0 48.1 48.3 48.4 48.6 48.8 48.9 49.1 49.2 49.4 49.5 49.7 49.8 50.0 50.2 50.3 50.5 50.6 50.8 50.9 51.1 51.2 51.4 51.6 51.7 51.9 52.0 52.2 52.3 52.5 52.6 52.8 53.0 53.1 53.3 53.4 53.6 53.7 53.9 54.0 54.2 54.4 54.5 54.7 54.8 55.0 55.1 55.3 55.5 55.6 55.8 55.9 56.1 56.2 56.4 56.5 56.7 56.9 57.0 57.2 57.3 57.5 57.6 57.8 57.9 58.1 58.3 58.4 58.6 58.7 58.9 59.0 59.2 59.3 59.5 59.7 59.8 60.0 60.1 60.3 60.4 60.6 60.7 60.9 61.1 61.2 61.4 61.5 61.7 61.8 62.0 62.1 62.3 62.5 62.6 62.8 62.9 63.1 63.2 63.4 63.6 63.7 63.9 64.0 64.2 64.3 64.5 64.6 64.8 65.0 65.1 65.3 65.4 65.6 65.7 65.9 66.0 66.2 66.4 66.5 66.7 66.8 67.0 67.1 67.3 67.4 67.6 67.8 67.9 68.1 68.2 68.4 68.5 68.7 68.8 69.0 69.2 69.3 69.5 69.6 69.8 69.9 70.1 70.2 70.4 70.6 70.7 70.9 71.0 71.2 71.3 71.5 71.7 71.8 72.0 72.1 72.3 72.4 72.6 72.7 72.9 73.1 73.2 73.4 73.5 73.7 73.8 74.0 74.1 74.3 74.5 74.6 74.8 74.9 75.1 75.2 75.4 75.5 75.7 75.9 76.0 76.2 76.3 76.5 76.6 76.8 76.9 77.1 77.3 77.4 77.6 77.7 77.9 78.0 78.2 78.3 78.5 78.7 78.8 79.0 79.1 79.3 79.4 79.6 79.8 79.9 80.1 80.2 80.4 80.5 80.7 80.8 81.0 81.2 81.3 81.5 81.6 81.8 81.9 82.1 82.2 82.4 82.6 82.7 82.9 83.0 83.2 83.3 83.5 83.6 83.8 84.0 84.1 84.3 84.4 84.6 84.7 84.9 85.0 85.2 85.4 85.5 85.7 85.8 86.0 86.1 86.3 86.4 86.6 86.8 86.9 87.1 87.2 87.4 87.5 87.7 87.9 88.0 88.2 88.3 88.5 88.6 88.8 88.9 89.1 89.3 89.4 89.6 89.7 89.9 90.0 90.2 90.3 90.5 90.7 90.8 91.0 91.1 91.3 91.4 91.6 91.7 91.9 92.1 92.2 92.4 92.5 92.7 92.8 93.0 93.1 93.3 93.5 93.6 93.8 93.9 94.1 94.2 94.4 94.5 94.7 94.9 95.0 95.2 95.3 95.5 95.6 95.8 96.0 96.1 96.3 96.4 96.6 96.7 96.9 97.0 97.2 97.4 97.5 97.7 97.8 98.0 98.1 98.3 98.4 98.6 98.8 98.9 99.1 99.2 99.4 99.5 99.7 99.8 -found 38 predictions from path traversal Error with prediction: snap lend_intergenic: 159229, rend_intergenic: 151778 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 172957, rend_intergenic: 169458 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 188291, rend_intergenic: 187137 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 255644, rend_intergenic: 250618 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 256992, rend_intergenic: 255898 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 261377, rend_intergenic: 257772 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -reporting highest scoring path thru the trellis. -found 37 predictions persist after filtering for low support