-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_1/scaffold_1_13463357-13734311

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GlimmerHMM_glimmerT_1792-T1
Valid prediction for snap_scaffold_1-snap.2314-T1
Valid prediction for snap_scaffold_1-snap.2330-T1
Valid prediction for snap_scaffold_1-snap.2316-T1
Valid prediction for CodingQuarry_transcript_2891-T1
Valid prediction for Augustus_model.g1325.t1
Valid prediction for Augustus_model.g1346.t1
Valid prediction for snap_scaffold_1-snap.2312-T1
Valid prediction for GlimmerHMM_glimmerT_1766-T1
Valid prediction for GlimmerHMM_glimmerT_1788-T1
Valid prediction for HiQ_model.g1335.t1
Valid prediction for snap_scaffold_1-snap.2323-T1
Valid prediction for Augustus_model.g1345.t1
Valid prediction for snap_scaffold_1-snap.2319-T1
Valid prediction for CodingQuarry_transcript_2886-T1
Valid prediction for GlimmerHMM_glimmerT_1773-T1
Valid prediction for GlimmerHMM_glimmerT_1793-T1
Valid prediction for snap_scaffold_1-snap.2336-T1
Valid prediction for snap_scaffold_1-snap.2341-T1
Valid prediction for GlimmerHMM_glimmerT_1763-T1
Valid prediction for Augustus_model.g1329.t1
Valid prediction for GlimmerHMM_glimmerT_1790-T1
Valid prediction for GlimmerHMM_glimmerT_1765-T1
Valid prediction for HiQ_model.g1342.t1
Valid prediction for GlimmerHMM_glimmerT_1787-T1
Valid prediction for GlimmerHMM_glimmerT_1774-T1
Couldn't classify 90144, 90158
Sorry, prediction pasa_asmbl_2308.p1 fails validation.
(ATG)	 AA	87532-87580	GT	AAG
(TCC)	 AG	88490-88516	GT	CGG
(TCC)	 AG	88732-89037	GT	AGG
(ATG)	 AG	89152-89253	GT	TCG
(GCC)	 AG	89545-89675	GT	AGG
(GTG)	 AG	89835-90014	GT	AGG
(CCA)	 AG	90144-90158	GT	GGG
-recovered pasa_asmbl_2308.p1, initial, 87532, 87580
add_exon() Sorry, pasa_asmbl_2308.p1 89152-89253-initial-1 is invalid.
-recovered pasa_asmbl_2308.p1, initial, 89152, 89253
-recovered pasa_asmbl_2308.p1, internal, 88490, 88516
-recovered pasa_asmbl_2308.p1, internal, 88732, 89037
-recovered pasa_asmbl_2308.p1, internal, 89152, 89253
-recovered pasa_asmbl_2308.p1, internal, 89545, 89675
-recovered pasa_asmbl_2308.p1, internal, 89835, 90014
-recovered pasa_asmbl_2308.p1, internal, 90144, 90158
Valid prediction for snap_scaffold_1-snap.2333-T1
Valid prediction for snap_scaffold_1-snap.2357-T1
Valid prediction for snap_scaffold_1-snap.2359-T1
Valid prediction for snap_scaffold_1-snap.2342-T1
Valid prediction for CodingQuarry_transcript_2888-T1
Valid prediction for pasa_asmbl_2311.p1
Valid prediction for Augustus_model.g1327.t1
Valid prediction for snap_scaffold_1-snap.2347-T1
Valid prediction for GlimmerHMM_glimmerT_1783-T1
Valid prediction for Augustus_model.g1336.t1
Valid prediction for GlimmerHMM_glimmerT_1789-T1
Valid prediction for GlimmerHMM_glimmerT_1779-T1
Valid prediction for Augustus_model.g1347.t1
Valid prediction for GlimmerHMM_glimmerT_1797-T1
Valid prediction for snap_scaffold_1-snap.2310-T1
Valid prediction for GlimmerHMM_glimmerT_1764-T1
Valid prediction for GlimmerHMM_glimmerT_1781-T1
Valid prediction for snap_scaffold_1-snap.2340-T1
Valid prediction for snap_scaffold_1-snap.2354-T1
Valid prediction for snap_scaffold_1-snap.2328-T1
Valid prediction for Augustus_model.g1328.t1
Valid prediction for HiQ_model.g1349.t1
Valid prediction for Augustus_model.g1340.t1
Valid prediction for Augustus_model.g1350.t1
Couldn't classify 93421, 93580
Sorry, prediction pasa_asmbl_2309.p1 fails validation.
(GAC)	 TA	93421-93580	GT	AGG
(ACA)	 AG	93681-93711	GT	AGG
(GTC)	 AG	93948-94033	GT	GGG
(AGT)	 AG	94119-94196	GT	AGG
(AGA)	 AG	94316-94341	GA	GAG
-recovered pasa_asmbl_2309.p1, terminal, 94316, 94341
-recovered pasa_asmbl_2309.p1, internal, 93681, 93711
-recovered pasa_asmbl_2309.p1, internal, 93948, 94033
-recovered pasa_asmbl_2309.p1, internal, 94119, 94196
Valid prediction for snap_scaffold_1-snap.2331-T1
Valid prediction for snap_scaffold_1-snap.2355-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_1-snap.2313-T1
Valid prediction for GlimmerHMM_glimmerT_1770-T1
Valid prediction for snap_scaffold_1-snap.2338-T1
Valid prediction for Augustus_model.g1348.t1
Couldn't classify 208504, 208600
Couldn't classify 209326, 209341
Sorry, prediction pasa_asmbl_820.p1 fails validation.
(GCC)	 GT	208504-208600	GT	CTG
(GTG)	 AG	208700-208889	GT	TGG
(TGA)	 AG	209089-209205	GT	GGG
(GTA)	 AG	209326-209341	GG	CAG
-recovered pasa_asmbl_820.p1, internal, 208700, 208889
-recovered pasa_asmbl_820.p1, internal, 209089, 209205
Valid prediction for CodingQuarry_transcript_2890-T1
Valid prediction for snap_scaffold_1-snap.2321-T1
Couldn't classify 190663, 190925
Sorry, prediction pasa_asmbl_828.p1 fails validation.
(ATG)	 TC	190249-190309	GT	AGG
(ATG)	 AG	190663-190925	AA	AGA
-recovered pasa_asmbl_828.p1, initial, 190249, 190309
Couldn't classify 155963, 155964
Sorry, prediction CodingQuarry_transcript_2887-T1 fails validation.
(ATG)	 TC	155963-155964	GT	ATG
(GTC)	 AG	157640-157718	GT	AGG
(GTG)	 AG	159196-159354	GT	AGG
(ATG)	 AG	159533-159584	GT	CGG
(TCT)	 AG	159671-159690	AG	AAA
-recovered CodingQuarry_transcript_2887-T1, initial, 159533, 159584
-recovered CodingQuarry_transcript_2887-T1, terminal, 159671, 159690
-recovered CodingQuarry_transcript_2887-T1, internal, 157640, 157718
-recovered CodingQuarry_transcript_2887-T1, internal, 159196, 159354
-recovered CodingQuarry_transcript_2887-T1, internal, 159533, 159584
Valid prediction for snap_scaffold_1-snap.2351-T1
Valid prediction for Augustus_model.g1337.t1
Couldn't classify 170142, 170780
Sorry, prediction pasa_asmbl_830.p1 fails validation.
(CAG)	 CA	170142-170780	CA	CTC
Valid prediction for snap_scaffold_1-snap.2353-T1
Valid prediction for GlimmerHMM_glimmerT_1786-T1
Couldn't classify 155963, 155964
Sorry, prediction pasa_asmbl_835.p1 fails validation.
(ATG)	 TC	155963-155964	GT	ATG
(GTC)	 AG	157640-157718	GT	AGG
(GTG)	 AG	159196-159354	GT	AGG
(ATG)	 AG	159533-159584	GT	CGG
(TCT)	 AG	159671-159690	AG	AAA
-recovered pasa_asmbl_835.p1, initial, 159533, 159584
-recovered pasa_asmbl_835.p1, terminal, 159671, 159690
-recovered pasa_asmbl_835.p1, internal, 157640, 157718
-recovered pasa_asmbl_835.p1, internal, 159196, 159354
-recovered pasa_asmbl_835.p1, internal, 159533, 159584
Valid prediction for snap_scaffold_1-snap.2318-T1
Couldn't classify 191649, 191919
Sorry, prediction pasa_asmbl_827.p1 fails validation.
(GTC)	 CT	191649-191919	GT	GGG
(ACC)	 AG	192099-192215	GT	TGG
(GGC)	 AG	192449-192474	GG	AAG
-recovered pasa_asmbl_827.p1, terminal, 192449, 192474
-recovered pasa_asmbl_827.p1, internal, 192099, 192215
Valid prediction for snap_scaffold_1-snap.2320-T1
Valid prediction for GlimmerHMM_glimmerT_1768-T1
Valid prediction for Augustus_model.g1341.t1
Valid prediction for GlimmerHMM_glimmerT_1778-T1
Valid prediction for GlimmerHMM_glimmerT_1785-T1
Valid prediction for snap_scaffold_1-snap.2356-T1
Couldn't classify 170799, 170816
Couldn't classify 171576, 171591
Sorry, prediction pasa_asmbl_1374.p1 fails validation.
(GAG)	 AC	170799-170816	GT	GGG
(GAT)	 AG	170963-171125	GT	AGG
(GAA)	 AG	171242-171428	GT	AGG
(GGA)	 AG	171576-171591	CT	TGC
-recovered pasa_asmbl_1374.p1, internal, 170963, 171125
-recovered pasa_asmbl_1374.p1, internal, 171242, 171428
Valid prediction for GlimmerHMM_glimmerT_1795-T1
Valid prediction for snap_scaffold_1-snap.2317-T1
Valid prediction for GlimmerHMM_glimmerT_1771-T1
Valid prediction for snap_scaffold_1-snap.2345-T1
Valid prediction for snap_scaffold_1-snap.2344-T1
Valid prediction for snap_scaffold_1-snap.2348-T1
Valid prediction for CodingQuarry_transcript_2884-T1
Valid prediction for pasa_asmbl_829.p1
Valid prediction for pasa_asmbl_839.p1
Valid prediction for GlimmerHMM_glimmerT_1767-T1
Valid prediction for snap_scaffold_1-snap.2315-T1
Valid prediction for Augustus_model.g1344.t1
Valid prediction for GlimmerHMM_glimmerT_1777-T1
Valid prediction for snap_scaffold_1-snap.2349-T1
Valid prediction for GlimmerHMM_glimmerT_1796-T1
Valid prediction for CodingQuarry_transcript_2882-T1
Valid prediction for snap_scaffold_1-snap.2350-T1
Valid prediction for CodingQuarry_transcript_2889-T1
Valid prediction for HiQ_model.g1338.t1
Valid prediction for snap_scaffold_1-snap.2343-T1
Valid prediction for snap_scaffold_1-snap.2352-T1
Valid prediction for CodingQuarry_transcript_2883-T1
Valid prediction for GlimmerHMM_glimmerT_1782-T1
Valid prediction for GlimmerHMM_glimmerT_1769-T1
Valid prediction for Augustus_model.g1334.t1
Valid prediction for snap_scaffold_1-snap.2322-T1
Valid prediction for snap_scaffold_1-snap.2334-T1
Valid prediction for GlimmerHMM_glimmerT_1772-T1
Valid prediction for Augustus_model.g1339.t1
Valid prediction for snap_scaffold_1-snap.2311-T1
Valid prediction for pasa_asmbl_811.p1
Couldn't classify 167480, 167532
Couldn't classify 168826, 168961
Sorry, prediction pasa_asmbl_832.p1 fails validation.
(AAT)	 TC	167480-167532	GT	ACG
(GAG)	 AG	167707-167815	GT	AGG
(CCG)	 AG	168129-168257	GT	CGG
(ATG)	 AG	168361-168469	GT	AGG
(CCC)	 AG	168617-168725	GT	AGG
(GTA)	 AG	168826-168961	GG	ATG
-recovered pasa_asmbl_832.p1, initial, 168361, 168469
-recovered pasa_asmbl_832.p1, internal, 167707, 167815
-recovered pasa_asmbl_832.p1, internal, 168129, 168257
-recovered pasa_asmbl_832.p1, internal, 168361, 168469
-recovered pasa_asmbl_832.p1, internal, 168617, 168725
Couldn't classify 194838, 194884
Sorry, prediction pasa_asmbl_821.p1 fails validation.
(ACT)	 AG	194838-194884	GT	AGG
(ATC)	 AG	195190-195234	GT	AGG
(GGG)	 AG	195558-195624	GT	AGG
(CTC)	 AG	195871-195997	GT	TGG
(GCT)	 AG	196127-196194	GT	AGG
(AAC)	 AG	196297-196404	GT	TGG
(AGC)	 AG	196522-196580	GT	CTG
(GTA)	 AG	196701-196803	GT	AGG
(TCC)	 AG	197008-197094	GT	AGG
(CTG)	 AG	197306-197383	AG	AAA
-recovered pasa_asmbl_821.p1, terminal, 197306, 197383
-recovered pasa_asmbl_821.p1, internal, 194838, 194884
-recovered pasa_asmbl_821.p1, internal, 195190, 195234
-recovered pasa_asmbl_821.p1, internal, 195558, 195624
-recovered pasa_asmbl_821.p1, internal, 195871, 195997
-recovered pasa_asmbl_821.p1, internal, 196127, 196194
-recovered pasa_asmbl_821.p1, internal, 196297, 196404
-recovered pasa_asmbl_821.p1, internal, 196522, 196580
-recovered pasa_asmbl_821.p1, internal, 196701, 196803
-recovered pasa_asmbl_821.p1, internal, 197008, 197094
Valid prediction for Augustus_model.g1331.t1
Valid prediction for snap_scaffold_1-snap.2335-T1
Valid prediction for GlimmerHMM_glimmerT_1780-T1
Valid prediction for Augustus_model.g1333.t1
Valid prediction for snap_scaffold_1-snap.2327-T1
Valid prediction for snap_scaffold_1-snap.2329-T1
Valid prediction for snap_scaffold_1-snap.2325-T1
Valid prediction for Augustus_model.g1326.t1
Valid prediction for snap_scaffold_1-snap.2346-T1
Valid prediction for HiQ_model.g1332.t1
Valid prediction for snap_scaffold_1-snap.2326-T1
Sorry, intron length (7) is less than minimum required (10)
Valid prediction for snap_scaffold_1-snap.2324-T1
Valid prediction for CodingQuarry_transcript_2885-T1
Valid prediction for GlimmerHMM_glimmerT_1798-T1
Valid prediction for snap_scaffold_1-snap.2332-T1
Valid prediction for snap_scaffold_1-snap.2339-T1
Sorry, intron length (7) is less than minimum required (10)
Valid prediction for snap_scaffold_1-snap.2337-T1
Couldn't classify 169212, 169323
Couldn't classify 169873, 170018
Sorry, prediction pasa_asmbl_831.p1 fails validation.
(GGT)	 TT	169212-169323	GT	AGG
(AGG)	 AG	169448-169711	GT	AGG
(GCG)	 AG	169873-170018	GC	TGG
-recovered pasa_asmbl_831.p1, internal, 169448, 169711
-recovered pasa_asmbl_831.p1, internal, 169873, 170018
Valid prediction for GlimmerHMM_glimmerT_1794-T1
Valid prediction for pasa_asmbl_815.p1
Valid prediction for GlimmerHMM_glimmerT_1791-T1
Valid prediction for HiQ_model.g1330.t1
Valid prediction for GlimmerHMM_glimmerT_1775-T1
Valid prediction for GlimmerHMM_glimmerT_1784-T1
Valid prediction for HiQ_model.g1343.t1
Valid prediction for GlimmerHMM_glimmerT_1776-T1
Valid prediction for snap_scaffold_1-snap.2358-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 17459, rend_intergenic: 1827  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 24556, rend_intergenic: 17597  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 28399, rend_intergenic: 25211  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 34688, rend_intergenic: 28498  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 42041, rend_intergenic: 34739  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 50062, rend_intergenic: 49484  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 57662, rend_intergenic: 51319  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 64467, rend_intergenic: 60647  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 71455, rend_intergenic: 64738  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 94459, rend_intergenic: 89585  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 106280, rend_intergenic: 96189  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 124439, rend_intergenic: 119611  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 134586, rend_intergenic: 129978  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 147420, rend_intergenic: 134711  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 156271, rend_intergenic: 147427  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 163330, rend_intergenic: 158144  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 183486, rend_intergenic: 178455  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 216083, rend_intergenic: 184444  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 236383, rend_intergenic: 216381  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 247970, rend_intergenic: 239841  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 253424, rend_intergenic: 248210  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 270955
-exon list size: 604


building trellis

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47.7    
47.9    
48.0    
48.2    
48.3    
48.5    
48.7    
48.8    
49.0    
49.2    
49.3    
49.5    
49.7    
49.8    
50.0    
50.2    
50.3    
50.5    
50.7    
50.8    
51.0    
51.2    
51.3    
51.5    
51.7    
51.8    
52.0    
52.1    
52.3    
52.5    
52.6    
52.8    
53.0    
53.1    
53.3    
53.5    
53.6    
53.8    
54.0    
54.1    
54.3    
54.5    
54.6    
54.8    
55.0    
55.1    
55.3    
55.4    
55.6    
55.8    
55.9    
56.1    
56.3    
56.4    
56.6    
56.8    
56.9    
57.1    
57.3    
57.4    
57.6    
57.8    
57.9    
58.1    
58.3    
58.4    
58.6    
58.7    
58.9    
59.1    
59.2    
59.4    
59.6    
59.7    
59.9    
60.1    
60.2    
60.4    
60.6    
60.7    
60.9    
61.1    
61.2    
61.4    
61.6    
61.7    
61.9    
62.0    
62.2    
62.4    
62.5    
62.7    
62.9    
63.0    
63.2    
63.4    
63.5    
63.7    
63.9    
64.0    
64.2    
64.4    
64.5    
64.7    
64.9    
65.0    
65.2    
65.3    
65.5    
65.7    
65.8    
66.0    
66.2    
66.3    
66.5    
66.7    
66.8    
67.0    
67.2    
67.3    
67.5    
67.7    
67.8    
68.0    
68.2    
68.3    
68.5    
68.6    
68.8    
69.0    
69.1    
69.3    
69.5    
69.6    
69.8    
70.0    
70.1    
70.3    
70.5    
70.6    
70.8    
71.0    
71.1    
71.3    
71.5    
71.6    
71.8    
71.9    
72.1    
72.3    
72.4    
72.6    
72.8    
72.9    
73.1    
73.3    
73.4    
73.6    
73.8    
73.9    
74.1    
74.3    
74.4    
74.6    
74.8    
74.9    
75.1    
75.2    
75.4    
75.6    
75.7    
75.9    
76.1    
76.2    
76.4    
76.6    
76.7    
76.9    
77.1    
77.2    
77.4    
77.6    
77.7    
77.9    
78.1    
78.2    
78.4    
78.5    
78.7    
78.9    
79.0    
79.2    
79.4    
79.5    
79.7    
79.9    
80.0    
80.2    
80.4    
80.5    
80.7    
80.9    
81.0    
81.2    
81.4    
81.5    
81.7    
81.8    
82.0    
82.2    
82.3    
82.5    
82.7    
82.8    
83.0    
83.2    
83.3    
83.5    
83.7    
83.8    
84.0    
84.2    
84.3    
84.5    
84.7    
84.8    
85.0    
85.1    
85.3    
85.5    
85.6    
85.8    
86.0    
86.1    
86.3    
86.5    
86.6    
86.8    
87.0    
87.1    
87.3    
87.5    
87.6    
87.8    
88.0    
88.1    
88.3    
88.4    
88.6    
88.8    
88.9    
89.1    
89.3    
89.4    
89.6    
89.8    
89.9    
90.1    
90.3    
90.4    
90.6    
90.8    
90.9    
91.1    
91.3    
91.4    
91.6    
91.7    
91.9    
92.1    
92.2    
92.4    
92.6    
92.7    
92.9    
93.1    
93.2    
93.4    
93.6    
93.7    
93.9    
94.1    
94.2    
94.4    
94.6    
94.7    
94.9    
95.0    
95.2    
95.4    
95.5    
95.7    
95.9    
96.0    
96.2    
96.4    
96.5    
96.7    
96.9    
97.0    
97.2    
97.4    
97.5    
97.7    
97.9    
98.0    
98.2    
98.3    
98.5    
98.7    
98.8    
99.0    
99.2    
99.3    
99.5    
99.7    
99.8    
-found 43 predictions from path traversal
Error with prediction: snap lend_intergenic: 17459, rend_intergenic: 1827  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 24556, rend_intergenic: 17597  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 28399, rend_intergenic: 25211  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 34688, rend_intergenic: 28498  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 42041, rend_intergenic: 34739  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 50062, rend_intergenic: 49484  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 57662, rend_intergenic: 51319  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 64467, rend_intergenic: 60647  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 71455, rend_intergenic: 64738  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 94459, rend_intergenic: 89585  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 106280, rend_intergenic: 96189  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 124439, rend_intergenic: 119611  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 134586, rend_intergenic: 129978  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 147420, rend_intergenic: 134711  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 156271, rend_intergenic: 147427  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 163330, rend_intergenic: 158144  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 183486, rend_intergenic: 178455  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 216083, rend_intergenic: 184444  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 236383, rend_intergenic: 216381  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 247970, rend_intergenic: 239841  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 253424, rend_intergenic: 248210  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 24 predictions persist after filtering for low support