-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_1/scaffold_1_12623818-12994977

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_1-snap.2219-T1
Valid prediction for pasa_asmbl_2287.p1
Valid prediction for snap_scaffold_1-snap.2186-T1
Valid prediction for Augustus_model.g1255.t1
Valid prediction for GlimmerHMM_glimmerT_1689-T1
Valid prediction for Augustus_model.g1264.t1
Valid prediction for HiQ_model.g1285.t1
Valid prediction for snap_scaffold_1-snap.2166-T1
Valid prediction for CodingQuarry_transcript_2872-T1
Valid prediction for snap_scaffold_1-snap.2206-T1
Valid prediction for snap_scaffold_1-snap.2164-T1
Valid prediction for GlimmerHMM_glimmerT_1663-T1
Valid prediction for GlimmerHMM_glimmerT_1692-T1
Couldn't classify 25498, 25536
Couldn't classify 30095, 30136
Sorry, prediction pasa_asmbl_2785.p1 fails validation.
(TGC)	 AA	25498-25536	GT	AGG
(TTG)	 AG	26253-26352	GT	TGG
(ATG)	 AG	26515-26555	GT	AGG
(GAT)	 AG	26649-26713	GT	AAG
(GGC)	 AG	26920-26968	GT	AGG
(AGG)	 AG	27115-27185	GT	AGG
(GTT)	 AG	27324-27361	GT	AGG
(CTG)	 AG	27455-27480	GT	ATG
(GTC)	 AG	27721-27789	GT	AGG
(ACG)	 AG	30095-30136	TG	CCT
add_exon() Sorry, pasa_asmbl_2785.p1 26515-26555-initial-1 is invalid.
-recovered pasa_asmbl_2785.p1, initial, 26515, 26555
-recovered pasa_asmbl_2785.p1, internal, 26253, 26352
-recovered pasa_asmbl_2785.p1, internal, 26515, 26555
-recovered pasa_asmbl_2785.p1, internal, 26649, 26713
-recovered pasa_asmbl_2785.p1, internal, 26920, 26968
-recovered pasa_asmbl_2785.p1, internal, 27115, 27185
-recovered pasa_asmbl_2785.p1, internal, 27324, 27361
-recovered pasa_asmbl_2785.p1, internal, 27455, 27480
-recovered pasa_asmbl_2785.p1, internal, 27721, 27789
Valid prediction for pasa_asmbl_2283.p1
Valid prediction for HiQ_model.g1281.t1
Valid prediction for snap_scaffold_1-snap.2171-T1
Couldn't classify 360977, 361057
Couldn't classify 363190, 363318
Sorry, prediction pasa_asmbl_2721.p1 fails validation.
(GCC)	 CA	360977-361057	GT	AGG
(AAA)	 AG	361689-361729	GT	GGG
(CTG)	 AG	362514-362586	GT	AGG
(AGT)	 AG	362702-362752	GT	CGG
(GCG)	 AG	363190-363318	GG	AGG
-recovered pasa_asmbl_2721.p1, internal, 361689, 361729
-recovered pasa_asmbl_2721.p1, internal, 362514, 362586
-recovered pasa_asmbl_2721.p1, internal, 362702, 362752
Valid prediction for CodingQuarry_transcript_2866-T1
Valid prediction for snap_scaffold_1-snap.2174-T1
Valid prediction for HiQ_model.g1265.t1
Valid prediction for GlimmerHMM_glimmerT_1667-T1
Couldn't classify 272251, 272255
Sorry, prediction pasa_asmbl_2266.p1 fails validation.
(CTA)	 TA	272251-272255	GT	GAG
(GTG)	 AG	272442-272796	CA	GAC
-recovered pasa_asmbl_2266.p1, terminal, 272442, 272796
Valid prediction for GlimmerHMM_glimmerT_1695-T1
Valid prediction for pasa_asmbl_2260.p1
Valid prediction for snap_scaffold_1-snap.2187-T1
Couldn't classify 271626, 271738
Couldn't classify 272152, 272256
Sorry, prediction pasa_asmbl_2748.p1 fails validation.
(GAC)	 GC	271626-271738	GT	GGG
(ACT)	 AG	271894-272029	GT	AGG
(AAA)	 AG	272152-272256	TG	AGT
-recovered pasa_asmbl_2748.p1, internal, 271894, 272029
Valid prediction for snap_scaffold_1-snap.2208-T1
Couldn't classify 304215, 304262
Sorry, prediction pasa_asmbl_2276.p1 fails validation.
(TTC)	 TG	304215-304262	GT	TGG
(AGG)	 AG	304376-304528	GT	AGG
(GCC)	 AG	304851-304947	GT	AGG
(AAT)	 AG	305227-305291	CC	GAC
-recovered pasa_asmbl_2276.p1, terminal, 305227, 305291
-recovered pasa_asmbl_2276.p1, internal, 304376, 304528
-recovered pasa_asmbl_2276.p1, internal, 304851, 304947
Valid prediction for snap_scaffold_1-snap.2201-T1
Valid prediction for snap_scaffold_1-snap.2202-T1
Valid prediction for GlimmerHMM_glimmerT_1668-T1
Valid prediction for GlimmerHMM_glimmerT_1665-T1
Valid prediction for snap_scaffold_1-snap.2217-T1
Valid prediction for Augustus_model.g1287.t1
Valid prediction for Augustus_model.g1266.t1
Valid prediction for snap_scaffold_1-snap.2212-T1
Valid prediction for snap_scaffold_1-snap.2198-T1
Valid prediction for pasa_asmbl_2278.p1
Valid prediction for GlimmerHMM_glimmerT_1675-T1
Valid prediction for pasa_asmbl_2259.p1
Valid prediction for Augustus_model.g1250.t1
Valid prediction for snap_scaffold_1-snap.2185-T1
Valid prediction for snap_scaffold_1-snap.2205-T1
Valid prediction for pasa_asmbl_2258.p1
Valid prediction for HiQ_model.g1292.t1
Valid prediction for CodingQuarry_transcript_2863-T1
Valid prediction for GlimmerHMM_glimmerT_1686-T1
Valid prediction for snap_scaffold_1-snap.2215-T1
Valid prediction for snap_scaffold_1-snap.2181-T1
Valid prediction for Augustus_model.g1257.t1
Valid prediction for CodingQuarry_transcript_2876-T1
Valid prediction for GlimmerHMM_glimmerT_1699-T1
Valid prediction for HiQ_model.g1283.t1
Valid prediction for snap_scaffold_1-snap.2207-T1
Valid prediction for snap_scaffold_1-snap.2188-T1
Valid prediction for Augustus_model.g1258.t1
Couldn't classify 13297, 13437
Couldn't classify 13552, 14301
Sorry, prediction pasa_asmbl_2241.p1 fails validation.
(CGC)	 TG	13297-13437	GT	TGG
(GCC)	 AG	13552-14301	TG	TGT
Valid prediction for GlimmerHMM_glimmerT_1694-T1
Valid prediction for Augustus_model.g1282.t1
Valid prediction for pasa_asmbl_2253.p1
Valid prediction for HiQ_model.g1294.t1
Valid prediction for snap_scaffold_1-snap.2203-T1
Valid prediction for Augustus_model.g1252.t1
Valid prediction for GlimmerHMM_glimmerT_1677-T1
Valid prediction for CodingQuarry_transcript_2861-T1
Valid prediction for pasa_asmbl_2256.p1
Valid prediction for CodingQuarry_transcript_2871-T1
Couldn't classify 281005, 281034
Sorry, prediction pasa_asmbl_2268.p1 fails validation.
(ATC)	 AG	281005-281034	GT	TGG
(GAT)	 AG	281282-281346	GT	AGG
(GGC)	 AG	281534-281624	GT	AGG
(TGT)	 AG	281751-281937	GT	GGG
(ACT)	 AG	282059-282179	GT	AAG
(GAC)	 AG	282273-282333	GT	CTG
(ATC)	 AG	282518-282598	AC	AGA
-recovered pasa_asmbl_2268.p1, terminal, 282518, 282598
-recovered pasa_asmbl_2268.p1, internal, 281005, 281034
-recovered pasa_asmbl_2268.p1, internal, 281282, 281346
-recovered pasa_asmbl_2268.p1, internal, 281534, 281624
-recovered pasa_asmbl_2268.p1, internal, 281751, 281937
-recovered pasa_asmbl_2268.p1, internal, 282059, 282179
-recovered pasa_asmbl_2268.p1, internal, 282273, 282333
Valid prediction for pasa_asmbl_2272.p1
Valid prediction for GlimmerHMM_glimmerT_1702-T1
Valid prediction for CodingQuarry_transcript_2845-T1
Valid prediction for snap_scaffold_1-snap.2218-T1
Valid prediction for HiQ_model.g1274.t1
Valid prediction for snap_scaffold_1-snap.2210-T1
Valid prediction for pasa_asmbl_2286.p1
Valid prediction for Augustus_model.g1262.t1
Couldn't classify 23828, 23860
Sorry, prediction pasa_asmbl_2242.p1 fails validation.
(TTT)	 CT	23828-23860	GT	AGG
(GTT)	 AG	23951-24052	GT	TGG
(ATT)	 AG	24133-24336	GT	GGG
(CAA)	 AG	24468-24572	AA	GAA
-recovered pasa_asmbl_2242.p1, terminal, 24468, 24572
-recovered pasa_asmbl_2242.p1, internal, 23951, 24052
-recovered pasa_asmbl_2242.p1, internal, 24133, 24336
Valid prediction for pasa_asmbl_2257.p1
Valid prediction for GlimmerHMM_glimmerT_1684-T1
Valid prediction for Augustus_model.g1284.t1
Valid prediction for GlimmerHMM_glimmerT_1701-T1
Valid prediction for HiQ_model.g1290.t1
Valid prediction for snap_scaffold_1-snap.2162-T1
Valid prediction for pasa_asmbl_2261.p1
Valid prediction for CodingQuarry_transcript_2853-T1
Valid prediction for CodingQuarry_transcript_2854-T1
Valid prediction for snap_scaffold_1-snap.2175-T1
Valid prediction for CodingQuarry_transcript_2865-T1
Valid prediction for pasa_asmbl_2246.p1
Valid prediction for snap_scaffold_1-snap.2176-T1
Valid prediction for CodingQuarry_transcript_2868-T1
Valid prediction for GlimmerHMM_glimmerT_1690-T1
Valid prediction for Augustus_model.g1277.t1
Valid prediction for GlimmerHMM_glimmerT_1662-T1
Valid prediction for CodingQuarry_transcript_2852-T1
Valid prediction for Augustus_model.g1295.t1
Couldn't classify 366969, 367001
Couldn't classify 368383, 368526
Sorry, prediction pasa_asmbl_2294.p1 fails validation.
(GAG)	 AG	366969-367001	GT	AGG
(GTG)	 AG	367158-367321	GT	ATG
(TGA)	 AG	367483-367595	GT	AGG
(AAA)	 AG	367687-367794	GT	GAG
(TCC)	 AG	367883-367965	GT	AGG
(GAG)	 AG	368211-368288	GT	AGG
(TAT)	 AG	368383-368526	CC	CTC
-recovered pasa_asmbl_2294.p1, internal, 366969, 367001
-recovered pasa_asmbl_2294.p1, internal, 367158, 367321
-recovered pasa_asmbl_2294.p1, internal, 367483, 367595
-recovered pasa_asmbl_2294.p1, internal, 367687, 367794
-recovered pasa_asmbl_2294.p1, internal, 367883, 367965
-recovered pasa_asmbl_2294.p1, internal, 368211, 368288
Couldn't classify 277316, 277386
Sorry, prediction pasa_asmbl_2267.p1 fails validation.
(ATG)	 GG	276453-276546	GT	ATG
(ATA)	 AG	276659-276735	GT	AGG
(CGT)	 AG	276943-277087	GT	AGG
(GTG)	 AG	277316-277386	GA	TGG
-recovered pasa_asmbl_2267.p1, initial, 276453, 276546
-recovered pasa_asmbl_2267.p1, internal, 276659, 276735
-recovered pasa_asmbl_2267.p1, internal, 276943, 277087
Valid prediction for Augustus_model.g1279.t1
Valid prediction for GlimmerHMM_glimmerT_1693-T1
Valid prediction for GlimmerHMM_glimmerT_1660-T1
Valid prediction for HiQ_model.g1278.t1
Valid prediction for pasa_asmbl_2281.p1
Valid prediction for snap_scaffold_1-snap.2170-T1
Valid prediction for CodingQuarry_transcript_2869-T1
Valid prediction for CodingQuarry_transcript_2846-T1
Valid prediction for GlimmerHMM_glimmerT_1697-T1
Valid prediction for CodingQuarry_transcript_2847-T1
Valid prediction for GlimmerHMM_glimmerT_1676-T1
Valid prediction for CodingQuarry_transcript_2862-T1
Valid prediction for snap_scaffold_1-snap.2165-T1
Valid prediction for CodingQuarry_transcript_2867-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_1-snap.2190-T1
Valid prediction for Augustus_model.g1260.t1
Valid prediction for snap_scaffold_1-snap.2192-T1
Valid prediction for pasa_asmbl_771.p1
Valid prediction for HiQ_model.g1248.t1
Valid prediction for snap_scaffold_1-snap.2169-T1
Valid prediction for CodingQuarry_transcript_2857-T1
Valid prediction for HiQ_model.g1267.t1
Valid prediction for CodingQuarry_transcript_2860-T1
Valid prediction for CodingQuarry_transcript_2858-T1
Valid prediction for snap_scaffold_1-snap.2178-T1
Valid prediction for pasa_asmbl_777.p1
Couldn't classify 354383, 354407
Couldn't classify 355019, 355055
Sorry, prediction pasa_asmbl_741.p1 fails validation.
(GTG)	 CA	354383-354407	GT	AGG
(CGC)	 AG	354519-354710	GT	TGG
(AGG)	 AG	354820-354922	GT	AGG
(CCT)	 AG	355019-355055	GA	CAG
-recovered pasa_asmbl_741.p1, internal, 354519, 354710
-recovered pasa_asmbl_741.p1, internal, 354820, 354922
Valid prediction for snap_scaffold_1-snap.2200-T1
Valid prediction for GlimmerHMM_glimmerT_1659-T1
Couldn't classify 193706, 193720
Sorry, prediction pasa_asmbl_769.p1 fails validation.
(ATG)	 CG	189889-190041	GT	AGG
(GAA)	 AG	191721-191798	GT	AGG
(GCT)	 AG	191988-192110	GT	AGG
(TTG)	 AG	192234-192404	GT	TGG
(AAA)	 AG	192808-192933	GT	AGG
(GGT)	 AG	193120-193213	GT	TGG
(TGA)	 AG	193407-193504	GT	CAG
(ATG)	 AG	193706-193720	TG	TGT
-recovered pasa_asmbl_769.p1, initial, 189889, 190041
-recovered pasa_asmbl_769.p1, internal, 191721, 191798
-recovered pasa_asmbl_769.p1, internal, 191988, 192110
-recovered pasa_asmbl_769.p1, internal, 192234, 192404
-recovered pasa_asmbl_769.p1, internal, 192808, 192933
-recovered pasa_asmbl_769.p1, internal, 193120, 193213
-recovered pasa_asmbl_769.p1, internal, 193407, 193504
Couldn't classify 353717, 354088
Sorry, prediction pasa_asmbl_742.p1 fails validation.
(GTG)	 CC	353717-354088	CC	TGC
Valid prediction for GlimmerHMM_glimmerT_1683-T1
Valid prediction for snap_scaffold_1-snap.2189-T1
Valid prediction for snap_scaffold_1-snap.2211-T1
Valid prediction for GlimmerHMM_glimmerT_1687-T1
Valid prediction for pasa_asmbl_770.p1
Valid prediction for GlimmerHMM_glimmerT_1666-T1
Valid prediction for CodingQuarry_transcript_2856-T1
Valid prediction for Augustus_model.g1293.t1
Valid prediction for CodingQuarry_transcript_2850-T1
Couldn't classify 40349, 40377
Sorry, prediction pasa_asmbl_783.p1 fails validation.
(CCT)	 AG	40349-40377	GT	AGG
(ACT)	 AG	40525-40724	GT	TGG
(GCC)	 AG	40804-40979	GT	AGG
(CCT)	 AG	41109-41156	GT	AGG
-recovered pasa_asmbl_783.p1, terminal, 41109, 41156
-recovered pasa_asmbl_783.p1, internal, 40349, 40377
-recovered pasa_asmbl_783.p1, internal, 40525, 40724
-recovered pasa_asmbl_783.p1, internal, 40804, 40979
-recovered pasa_asmbl_783.p1, internal, 41109, 41156
Valid prediction for GlimmerHMM_glimmerT_1685-T1
Valid prediction for pasa_asmbl_749.p1
Valid prediction for Augustus_model.g1291.t1
Valid prediction for GlimmerHMM_glimmerT_1691-T1
Valid prediction for snap_scaffold_1-snap.2177-T1
Valid prediction for GlimmerHMM_glimmerT_1669-T1
Valid prediction for Augustus_model.g1276.t1
Valid prediction for snap_scaffold_1-snap.2196-T1
Valid prediction for Augustus_model.g1253.t1
Valid prediction for HiQ_model.g1286.t1
Valid prediction for GlimmerHMM_glimmerT_1681-T1
Valid prediction for snap_scaffold_1-snap.2204-T1
Valid prediction for GlimmerHMM_glimmerT_1688-T1
Valid prediction for GlimmerHMM_glimmerT_1698-T1
Valid prediction for snap_scaffold_1-snap.2163-T1
Valid prediction for pasa_asmbl_767.p1
Valid prediction for pasa_asmbl_782.p1
Valid prediction for Augustus_model.g1273.t1
Valid prediction for snap_scaffold_1-snap.2173-T1
Valid prediction for CodingQuarry_transcript_2864-T1
Valid prediction for CodingQuarry_transcript_2873-T1
Valid prediction for GlimmerHMM_glimmerT_1680-T1
Valid prediction for snap_scaffold_1-snap.2183-T1
Valid prediction for pasa_asmbl_775.p1
Valid prediction for GlimmerHMM_glimmerT_1661-T1
Valid prediction for snap_scaffold_1-snap.2197-T1
Valid prediction for snap_scaffold_1-snap.2180-T1
Valid prediction for snap_scaffold_1-snap.2195-T1
Valid prediction for pasa_asmbl_763.p1
Valid prediction for GlimmerHMM_glimmerT_1674-T1
Valid prediction for snap_scaffold_1-snap.2161-T1
Valid prediction for Augustus_model.g1254.t1
Valid prediction for snap_scaffold_1-snap.2194-T1
Valid prediction for CodingQuarry_transcript_2859-T1
Valid prediction for Augustus_model.g1251.t1
Valid prediction for GlimmerHMM_glimmerT_1658-T1
Valid prediction for snap_scaffold_1-snap.2160-T1
Valid prediction for snap_scaffold_1-snap.2199-T1
Couldn't classify 54319, 54395
Sorry, prediction pasa_asmbl_779.p1 fails validation.
(CTA)	 AT	54319-54395	GT	GTG
(CGT)	 AG	56764-56860	GT	AGG
(TCC)	 AG	57337-58254	GT	AGG
(CTG)	 AG	58405-58538	GT	AGG
(GGC)	 AG	58879-58930	GT	AGG
(GTG)	 AG	59284-59398	GT	AGG
(ACG)	 AG	59656-59841	GT	AGG
(ATT)	 AG	61003-61100	AA	GAA
-recovered pasa_asmbl_779.p1, terminal, 61003, 61100
-recovered pasa_asmbl_779.p1, internal, 56764, 56860
-recovered pasa_asmbl_779.p1, internal, 57337, 58254
-recovered pasa_asmbl_779.p1, internal, 58405, 58538
-recovered pasa_asmbl_779.p1, internal, 58879, 58930
-recovered pasa_asmbl_779.p1, internal, 59284, 59398
-recovered pasa_asmbl_779.p1, internal, 59656, 59841
Valid prediction for HiQ_model.g1271.t1
Valid prediction for GlimmerHMM_glimmerT_1670-T1
Valid prediction for HiQ_model.g1259.t1
Valid prediction for HiQ_model.g1268.t1
Valid prediction for pasa_asmbl_786.p1
Valid prediction for snap_scaffold_1-snap.2168-T1
Valid prediction for snap_scaffold_1-snap.2179-T1
Valid prediction for Augustus_model.g1249.t1
Valid prediction for snap_scaffold_1-snap.2172-T1
Valid prediction for GlimmerHMM_glimmerT_1700-T1
Valid prediction for HiQ_model.g1288.t1
Valid prediction for pasa_asmbl_773.p1
Valid prediction for GlimmerHMM_glimmerT_1664-T1
Valid prediction for GlimmerHMM_glimmerT_1679-T1
Valid prediction for GlimmerHMM_glimmerT_1678-T1
Valid prediction for HiQ_model.g1256.t1
Valid prediction for CodingQuarry_transcript_2851-T1
Valid prediction for Augustus_model.g1272.t1
Valid prediction for pasa_asmbl_745.p1
Valid prediction for HiQ_model.g1270.t1
Valid prediction for CodingQuarry_transcript_2874-T1
Valid prediction for snap_scaffold_1-snap.2159-T1
Couldn't classify 234101, 234126
Sorry, prediction pasa_asmbl_759.p1 fails validation.
(GCT)	 TC	234101-234126	GT	AGG
(GAT)	 AG	234216-234286	GT	TGG
(GCT)	 AG	234391-234458	GT	AGG
(TAT)	 AG	234571-234726	GT	AGG
(TCT)	 AG	234959-235117	GT	TGG
(AAT)	 AG	235213-235299	GT	GAG
(GGT)	 AG	235504-235623	GT	AAG
(GGT)	 AG	235716-235865	GT	AGG
(CTG)	 AG	236280-236353	GT	TTG
(GCT)	 AG	236451-236604	GT	TGG
(GCT)	 AG	237016-237123	AC	AAA
-recovered pasa_asmbl_759.p1, terminal, 237016, 237123
-recovered pasa_asmbl_759.p1, internal, 234216, 234286
-recovered pasa_asmbl_759.p1, internal, 234391, 234458
-recovered pasa_asmbl_759.p1, internal, 234571, 234726
-recovered pasa_asmbl_759.p1, internal, 234959, 235117
-recovered pasa_asmbl_759.p1, internal, 235213, 235299
-recovered pasa_asmbl_759.p1, internal, 235504, 235623
-recovered pasa_asmbl_759.p1, internal, 235716, 235865
-recovered pasa_asmbl_759.p1, internal, 236280, 236353
-recovered pasa_asmbl_759.p1, internal, 236451, 236604
Valid prediction for GlimmerHMM_glimmerT_1682-T1
Valid prediction for snap_scaffold_1-snap.2214-T1
Valid prediction for HiQ_model.g1261.t1
Valid prediction for GlimmerHMM_glimmerT_1696-T1
Valid prediction for Augustus_model.g1289.t1
Valid prediction for CodingQuarry_transcript_2849-T1
Valid prediction for snap_scaffold_1-snap.2191-T1
Valid prediction for snap_scaffold_1-snap.2213-T1
Valid prediction for CodingQuarry_transcript_2870-T1
Valid prediction for Augustus_model.g1275.t1
Valid prediction for CodingQuarry_transcript_2855-T1
Valid prediction for HiQ_model.g1269.t1
Valid prediction for GlimmerHMM_glimmerT_1673-T1
Valid prediction for snap_scaffold_1-snap.2182-T1
Valid prediction for CodingQuarry_transcript_2848-T1
Valid prediction for Augustus_model.g1263.t1
Valid prediction for snap_scaffold_1-snap.2209-T1
Valid prediction for pasa_asmbl_738.p1
Valid prediction for snap_scaffold_1-snap.2167-T1
Valid prediction for HiQ_model.g1280.t1
Valid prediction for GlimmerHMM_glimmerT_1671-T1
Valid prediction for GlimmerHMM_glimmerT_1672-T1
Valid prediction for snap_scaffold_1-snap.2193-T1
Valid prediction for pasa_asmbl_748.p1
Valid prediction for snap_scaffold_1-snap.2184-T1
Valid prediction for CodingQuarry_transcript_2844-T1
Valid prediction for snap_scaffold_1-snap.2216-T1
Sorry, intron length (5) is less than minimum required (10)

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 371160
-exon list size: 698


building trellis

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0.3    
0.4    
0.6    
0.7    
0.9    
1.0    
1.1    
1.3    
1.4    
1.6    
1.7    
1.9    
2.0    
2.1    
2.3    
2.4    
2.6    
2.7    
2.9    
3.0    
3.1    
3.3    
3.4    
3.6    
3.7    
3.9    
4.0    
4.1    
4.3    
4.4    
4.6    
4.7    
4.9    
5.0    
5.1    
5.3    
5.4    
5.6    
5.7    
5.9    
6.0    
6.1    
6.3    
6.4    
6.6    
6.7    
6.9    
7.0    
7.1    
7.3    
7.4    
7.6    
7.7    
7.9    
8.0    
8.1    
8.3    
8.4    
8.6    
8.7    
8.9    
9.0    
9.1    
9.3    
9.4    
9.6    
9.7    
9.9    
10.0    
10.1    
10.3    
10.4    
10.6    
10.7    
10.9    
11.0    
11.1    
11.3    
11.4    
11.6    
11.7    
11.9    
12.0    
12.1    
12.3    
12.4    
12.6    
12.7    
12.9    
13.0    
13.1    
13.3    
13.4    
13.6    
13.7    
13.9    
14.0    
14.1    
14.3    
14.4    
14.6    
14.7    
14.9    
15.0    
15.1    
15.3    
15.4    
15.6    
15.7    
15.9    
16.0    
16.1    
16.3    
16.4    
16.6    
16.7    
16.9    
17.0    
17.1    
17.3    
17.4    
17.6    
17.7    
17.9    
18.0    
18.1    
18.3    
18.4    
18.6    
18.7    
18.9    
19.0    
19.1    
19.3    
19.4    
19.6    
19.7    
19.9    
20.0    
20.1    
20.3    
20.4    
20.6    
20.7    
20.9    
21.0    
21.1    
21.3    
21.4    
21.6    
21.7    
21.9    
22.0    
22.1    
22.3    
22.4    
22.6    
22.7    
22.9    
23.0    
23.1    
23.3    
23.4    
23.6    
23.7    
23.9    
24.0    
24.1    
24.3    
24.4    
24.6    
24.7    
24.9    
25.0    
25.1    
25.3    
25.4    
25.6    
25.7    
25.9    
26.0    
26.1    
26.3    
26.4    
26.6    
26.7    
26.9    
27.0    
27.1    
27.3    
27.4    
27.6    
27.7    
27.9    
28.0    
28.1    
28.3    
28.4    
28.6    
28.7    
28.9    
29.0    
29.1    
29.3    
29.4    
29.6    
29.7    
29.9    
30.0    
30.1    
30.3    
30.4    
30.6    
30.7    
30.9    
31.0    
31.1    
31.3    
31.4    
31.6    
31.7    
31.9    
32.0    
32.1    
32.3    
32.4    
32.6    
32.7    
32.9    
33.0    
33.1    
33.3    
33.4    
33.6    
33.7    
33.9    
34.0    
34.1    
34.3    
34.4    
34.6    
34.7    
34.9    
35.0    
35.1    
35.3    
35.4    
35.6    
35.7    
35.9    
36.0    
36.1    
36.3    
36.4    
36.6    
36.7    
36.9    
37.0    
37.1    
37.3    
37.4    
37.6    
37.7    
37.9    
38.0    
38.1    
38.3    
38.4    
38.6    
38.7    
38.9    
39.0    
39.1    
39.3    
39.4    
39.6    
39.7    
39.9    
40.0    
40.1    
40.3    
40.4    
40.6    
40.7    
40.9    
41.0    
41.1    
41.3    
41.4    
41.6    
41.7    
41.9    
42.0    
42.1    
42.3    
42.4    
42.6    
42.7    
42.9    
43.0    
43.1    
43.3    
43.4    
43.6    
43.7    
43.9    
44.0    
44.1    
44.3    
44.4    
44.6    
44.7    
44.9    
45.0    
45.1    
45.3    
45.4    
45.6    
45.7    
45.9    
46.0    
46.1    
46.3    
46.4    
46.6    
46.7    
46.9    
47.0    
47.1    
47.3    
47.4    
47.6    
47.7    
47.9    
48.0    
48.1    
48.3    
48.4    
48.6    
48.7    
48.9    
49.0    
49.1    
49.3    
49.4    
49.6    
49.7    
49.9    
50.0    
50.1    
50.3    
50.4    
50.6    
50.7    
50.9    
51.0    
51.1    
51.3    
51.4    
51.6    
51.7    
51.9    
52.0    
52.1    
52.3    
52.4    
52.6    
52.7    
52.9    
53.0    
53.1    
53.3    
53.4    
53.6    
53.7    
53.9    
54.0    
54.1    
54.3    
54.4    
54.6    
54.7    
54.9    
55.0    
55.1    
55.3    
55.4    
55.6    
55.7    
55.9    
56.0    
56.1    
56.3    
56.4    
56.6    
56.7    
56.9    
57.0    
57.1    
57.3    
57.4    
57.6    
57.7    
57.9    
58.0    
58.1    
58.3    
58.4    
58.6    
58.7    
58.9    
59.0    
59.1    
59.3    
59.4    
59.6    
59.7    
59.9    
60.0    
60.1    
60.3    
60.4    
60.6    
60.7    
60.9    
61.0    
61.1    
61.3    
61.4    
61.6    
61.7    
61.9    
62.0    
62.1    
62.3    
62.4    
62.6    
62.7    
62.9    
63.0    
63.1    
63.3    
63.4    
63.6    
63.7    
63.9    
64.0    
64.1    
64.3    
64.4    
64.6    
64.7    
64.9    
65.0    
65.1    
65.3    
65.4    
65.6    
65.7    
65.9    
66.0    
66.1    
66.3    
66.4    
66.6    
66.7    
66.9    
67.0    
67.1    
67.3    
67.4    
67.6    
67.7    
67.9    
68.0    
68.1    
68.3    
68.4    
68.6    
68.7    
68.9    
69.0    
69.1    
69.3    
69.4    
69.6    
69.7    
69.9    
70.0    
70.1    
70.3    
70.4    
70.6    
70.7    
70.9    
71.0    
71.1    
71.3    
71.4    
71.6    
71.7    
71.9    
72.0    
72.1    
72.3    
72.4    
72.6    
72.7    
72.9    
73.0    
73.1    
73.3    
73.4    
73.6    
73.7    
73.9    
74.0    
74.1    
74.3    
74.4    
74.6    
74.7    
74.9    
75.0    
75.1    
75.3    
75.4    
75.6    
75.7    
75.9    
76.0    
76.1    
76.3    
76.4    
76.6    
76.7    
76.9    
77.0    
77.1    
77.3    
77.4    
77.6    
77.7    
77.9    
78.0    
78.1    
78.3    
78.4    
78.6    
78.7    
78.9    
79.0    
79.1    
79.3    
79.4    
79.6    
79.7    
79.9    
80.0    
80.1    
80.3    
80.4    
80.6    
80.7    
80.9    
81.0    
81.1    
81.3    
81.4    
81.6    
81.7    
81.9    
82.0    
82.1    
82.3    
82.4    
82.6    
82.7    
82.9    
83.0    
83.1    
83.3    
83.4    
83.6    
83.7    
83.9    
84.0    
84.1    
84.3    
84.4    
84.6    
84.7    
84.9    
85.0    
85.1    
85.3    
85.4    
85.6    
85.7    
85.9    
86.0    
86.1    
86.3    
86.4    
86.6    
86.7    
86.9    
87.0    
87.1    
87.3    
87.4    
87.6    
87.7    
87.9    
88.0    
88.1    
88.3    
88.4    
88.6    
88.7    
88.9    
89.0    
89.1    
89.3    
89.4    
89.6    
89.7    
89.9    
90.0    
90.1    
90.3    
90.4    
90.6    
90.7    
90.9    
91.0    
91.1    
91.3    
91.4    
91.6    
91.7    
91.9    
92.0    
92.1    
92.3    
92.4    
92.6    
92.7    
92.9    
93.0    
93.1    
93.3    
93.4    
93.6    
93.7    
93.9    
94.0    
94.1    
94.3    
94.4    
94.6    
94.7    
94.9    
95.0    
95.1    
95.3    
95.4    
95.6    
95.7    
95.9    
96.0    
96.1    
96.3    
96.4    
96.6    
96.7    
96.9    
97.0    
97.1    
97.3    
97.4    
97.6    
97.7    
97.9    
98.0    
98.1    
98.3    
98.4    
98.6    
98.7    
98.9    
99.0    
99.1    
99.3    
99.4    
99.6    
99.7    
99.9    
-found 56 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 54 predictions persist after filtering for low support