-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~funannotate/test/fun/predict_misc/EVM/scaffold_1/scaffold_1_12065455-12301996

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GlimmerHMM_glimmerT_1619-T1
Valid prediction for snap_scaffold_1-snap.2115-T1
Valid prediction for GlimmerHMM_glimmerT_1602-T1
Valid prediction for GlimmerHMM_glimmerT_1623-T1
Valid prediction for snap_scaffold_1-snap.2107-T1
Valid prediction for GlimmerHMM_glimmerT_1605-T1
Valid prediction for snap_scaffold_1-snap.2106-T1
Valid prediction for Augustus_model.g1211.t1
Valid prediction for snap_scaffold_1-snap.2087-T1
Couldn't classify 96627, 96650
Sorry, prediction pasa_asmbl_2183.p1 fails validation.
(ATG)	 CG	93680-94039	GT	GGG
(GTT)	 AG	94731-94772	GT	AGG
(GTG)	 AG	95710-95844	GT	AGG
(GCC)	 AG	95991-96064	GT	AGG
(CTA)	 AG	96210-96282	GT	AGG
(CTG)	 AG	96398-96487	GT	CGG
(AAA)	 AG	96627-96650	CT	GAC
-recovered pasa_asmbl_2183.p1, initial, 93680, 94039
-recovered pasa_asmbl_2183.p1, internal, 94731, 94772
-recovered pasa_asmbl_2183.p1, internal, 95710, 95844
-recovered pasa_asmbl_2183.p1, internal, 95991, 96064
-recovered pasa_asmbl_2183.p1, internal, 96210, 96282
-recovered pasa_asmbl_2183.p1, internal, 96398, 96487
Valid prediction for GlimmerHMM_glimmerT_1610-T1
Valid prediction for snap_scaffold_1-snap.2118-T1
Valid prediction for CodingQuarry_transcript_2818-T1
Valid prediction for GlimmerHMM_glimmerT_1624-T1
Couldn't classify 101980, 102126
Sorry, prediction pasa_asmbl_2185.p1 fails validation.
(CAA)	 CC	101980-102126	GT	AGG
(GCC)	 AG	102238-102320	GT	AGG
(GTT)	 AG	102408-102456	GT	AGG
(TGG)	 AG	102545-102634	GT	AGG
(GTG)	 AG	105627-105722	GT	CTG
(TTA)	 AG	105838-105909	GT	AGG
(GTG)	 AG	105996-106082	GT	AGG
(CTG)	 AG	106211-106357	GT	AGG
(ATC)	 AG	106512-106654	GT	AGG
(GGG)	 AG	106807-106932	GT	AGG
(GTT)	 AG	107023-107131	GT	AGG
(GTT)	 AG	107577-107626	GT	TGG
(GTT)	 AG	107751-107775	TG	AGT
-recovered pasa_asmbl_2185.p1, terminal, 107751, 107775
-recovered pasa_asmbl_2185.p1, internal, 102238, 102320
-recovered pasa_asmbl_2185.p1, internal, 102408, 102456
-recovered pasa_asmbl_2185.p1, internal, 102545, 102634
-recovered pasa_asmbl_2185.p1, internal, 105627, 105722
-recovered pasa_asmbl_2185.p1, internal, 105838, 105909
-recovered pasa_asmbl_2185.p1, internal, 105996, 106082
-recovered pasa_asmbl_2185.p1, internal, 106211, 106357
-recovered pasa_asmbl_2185.p1, internal, 106512, 106654
-recovered pasa_asmbl_2185.p1, internal, 106807, 106932
-recovered pasa_asmbl_2185.p1, internal, 107023, 107131
-recovered pasa_asmbl_2185.p1, internal, 107577, 107626
Valid prediction for GlimmerHMM_glimmerT_1601-T1
Valid prediction for snap_scaffold_1-snap.2102-T1
Sorry, intron length (4) is less than minimum required (10)
Sorry, intron length (3) is less than minimum required (10)
Valid prediction for snap_scaffold_1-snap.2104-T1
Couldn't classify 90542, 91168
Sorry, prediction pasa_asmbl_2181.p1 fails validation.
(ATG)	 CC	90542-91168	CC	GAC
Valid prediction for GlimmerHMM_glimmerT_1615-T1
Valid prediction for snap_scaffold_1-snap.2114-T1
Valid prediction for HiQ_model.g1202.t1
Valid prediction for snap_scaffold_1-snap.2088-T1
Valid prediction for snap_scaffold_1-snap.2083-T1
Valid prediction for CodingQuarry_transcript_2821-T1
Valid prediction for snap_scaffold_1-snap.2112-T1
Valid prediction for HiQ_model.g1197.t1
Valid prediction for snap_scaffold_1-snap.2081-T1
Valid prediction for snap_scaffold_1-snap.2100-T1
Valid prediction for Augustus_model.g1206.t1
Valid prediction for snap_scaffold_1-snap.2097-T1
Valid prediction for Augustus_model.g1204.t1
Valid prediction for Augustus_model.g1203.t1
Valid prediction for snap_scaffold_1-snap.2108-T1
Valid prediction for CodingQuarry_transcript_2823-T1
Valid prediction for snap_scaffold_1-snap.2098-T1
Valid prediction for GlimmerHMM_glimmerT_1621-T1
Valid prediction for GlimmerHMM_glimmerT_1612-T1
Valid prediction for CodingQuarry_transcript_2819-T1
Valid prediction for GlimmerHMM_glimmerT_1626-T1
Couldn't classify 91334, 91660
Sorry, prediction pasa_asmbl_2182.p1 fails validation.
(GGG)	 TC	91334-91660	GT	AGG
(GTG)	 AG	91767-92279	CT	GAC
-recovered pasa_asmbl_2182.p1, terminal, 91767, 92279
Couldn't classify 100687, 100701
Couldn't classify 101658, 101799
Sorry, prediction pasa_asmbl_2188.p1 fails validation.
(TCT)	 CG	100687-100701	GT	CGG
(GTG)	 AG	100799-100885	GT	AGG
(TTG)	 AG	100999-101145	GT	AGG
(GTG)	 AG	101407-101513	GT	AAG
(GTC)	 AG	101658-101799	AT	ACA
-recovered pasa_asmbl_2188.p1, internal, 100799, 100885
-recovered pasa_asmbl_2188.p1, internal, 100999, 101145
-recovered pasa_asmbl_2188.p1, internal, 101407, 101513
Valid prediction for GlimmerHMM_glimmerT_1611-T1
Valid prediction for pasa_asmbl_2192.p1
Couldn't classify 209285, 209442
Sorry, prediction pasa_asmbl_2195.p1 fails validation.
(CAA)	 AG	209285-209442	GT	AGG
(AAT)	 AG	209576-209655	GT	TGG
(TGC)	 AG	209817-209926	GT	CGG
(GGA)	 AG	210110-210153	GT	GGG
(GTT)	 AG	210465-210558	GT	AGG
(GTA)	 AG	210736-210786	GT	CAG
(GGA)	 AG	210903-211013	GT	CAG
(TAT)	 AG	211188-211268	GT	AGG
(GAG)	 AG	211400-211480	AG	GAA
-recovered pasa_asmbl_2195.p1, terminal, 211400, 211480
-recovered pasa_asmbl_2195.p1, internal, 209285, 209442
-recovered pasa_asmbl_2195.p1, internal, 209576, 209655
-recovered pasa_asmbl_2195.p1, internal, 209817, 209926
-recovered pasa_asmbl_2195.p1, internal, 210110, 210153
-recovered pasa_asmbl_2195.p1, internal, 210465, 210558
-recovered pasa_asmbl_2195.p1, internal, 210736, 210786
-recovered pasa_asmbl_2195.p1, internal, 210903, 211013
-recovered pasa_asmbl_2195.p1, internal, 211188, 211268
Valid prediction for pasa_asmbl_2177.p1
Valid prediction for snap_scaffold_1-snap.2086-T1
Valid prediction for snap_scaffold_1-snap.2111-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 213982, 214148
Couldn't classify 214499, 214679
Sorry, prediction pasa_asmbl_1364.p1 fails validation.
(GGG)	 AG	213982-214148	GT	AGG
(GTA)	 AG	214499-214679	CA	CCC
-recovered pasa_asmbl_1364.p1, internal, 213982, 214148
Valid prediction for Augustus_model.g1207.t1
Valid prediction for GlimmerHMM_glimmerT_1616-T1
Valid prediction for GlimmerHMM_glimmerT_1608-T1
Valid prediction for GlimmerHMM_glimmerT_1613-T1
Valid prediction for snap_scaffold_1-snap.2093-T1
Valid prediction for CodingQuarry_transcript_2824-T1
Valid prediction for Augustus_model.g1213.t1
Valid prediction for GlimmerHMM_glimmerT_1609-T1
Valid prediction for GlimmerHMM_glimmerT_1617-T1
Valid prediction for GlimmerHMM_glimmerT_1627-T1
Valid prediction for Augustus_model.g1201.t1
Valid prediction for Augustus_model.g1198.t1
Valid prediction for HiQ_model.g1205.t1
Couldn't classify 226219, 226321
Couldn't classify 227764, 227960
Sorry, prediction pasa_asmbl_1327.p1 fails validation.
(CGT)	 AT	226219-226321	GT	AGG
(GTG)	 AG	227764-227960	AT	CCA
Valid prediction for CodingQuarry_transcript_2822-T1
Valid prediction for Augustus_model.g1212.t1
Valid prediction for snap_scaffold_1-snap.2110-T1
Valid prediction for snap_scaffold_1-snap.2105-T1
Valid prediction for snap_scaffold_1-snap.2103-T1
Couldn't classify 220633, 220710
Couldn't classify 221074, 221143
Sorry, prediction pasa_asmbl_1242.p1 fails validation.
(TCC)	 TG	220633-220710	GT	AGG
(GAC)	 AG	220800-220948	GT	AAG
(ACT)	 AG	221074-221143	CT	CCC
-recovered pasa_asmbl_1242.p1, internal, 220800, 220948
Valid prediction for CodingQuarry_transcript_2820-T1
Valid prediction for Augustus_model.g1200.t1
Couldn't classify 100286, 100340
Couldn't classify 100454, 100815
Sorry, prediction pasa_asmbl_690.p1 fails validation.
(GGC)	 CA	100286-100340	GT	AGG
(GAA)	 AG	100454-100815	AC	GGA
Valid prediction for snap_scaffold_1-snap.2101-T1
Valid prediction for snap_scaffold_1-snap.2092-T1
Couldn't classify 118258, 118462
Sorry, prediction pasa_asmbl_689.p1 fails validation.
(TTT)	 AC	118258-118462	GT	AGG
(CCC)	 AG	118577-118750	GT	AGG
(GTG)	 AG	118914-119075	GT	CCG
(GCA)	 AG	119215-119398	GT	AAG
(CTG)	 AG	119533-119634	GT	AGG
(GTG)	 AG	119755-119828	GT	ACG
(GCA)	 AG	119944-120037	GT	GGG
(AGC)	 AG	120993-121137	GT	AGG
(CCA)	 AG	121231-121371	AC	AGA
-recovered pasa_asmbl_689.p1, terminal, 121231, 121371
-recovered pasa_asmbl_689.p1, internal, 118577, 118750
-recovered pasa_asmbl_689.p1, internal, 118914, 119075
-recovered pasa_asmbl_689.p1, internal, 119215, 119398
-recovered pasa_asmbl_689.p1, internal, 119533, 119634
-recovered pasa_asmbl_689.p1, internal, 119755, 119828
-recovered pasa_asmbl_689.p1, internal, 119944, 120037
-recovered pasa_asmbl_689.p1, internal, 120993, 121137
Valid prediction for Augustus_model.g1210.t1
Valid prediction for Augustus_model.g1194.t1
Valid prediction for GlimmerHMM_glimmerT_1607-T1
Valid prediction for snap_scaffold_1-snap.2109-T1
Couldn't classify 105770, 105955
Sorry, prediction pasa_asmbl_688.p2 fails validation.
(TGG)	 AC	105770-105955	GT	ATG
(GTG)	 AG	106076-106268	GT	CTG
(GTG)	 AG	106851-106976	GT	TGG
(CGG)	 AG	107160-107288	GT	CTG
(CTA)	 AG	107469-107588	GT	CAG
(CTA)	 AG	107739-107852	GT	CTG
(CTG)	 AG	107950-108105	GT	AGG
(GAA)	 AG	108237-108359	GT	TGG
(ATA)	 AG	108591-108704	GT	CGG
(CTA)	 AG	108830-108958	GT	TGG
(TGT)	 AG	109052-109174	GT	CGG
(AGT)	 AG	109472-109612	GT	AGG
(AGA)	 AG	109738-109925	GT	AGG
(TGC)	 AG	110173-110373	GG	GAG
-recovered pasa_asmbl_688.p2, terminal, 110173, 110373
-recovered pasa_asmbl_688.p2, internal, 106076, 106268
-recovered pasa_asmbl_688.p2, internal, 106851, 106976
-recovered pasa_asmbl_688.p2, internal, 107160, 107288
-recovered pasa_asmbl_688.p2, internal, 107469, 107588
-recovered pasa_asmbl_688.p2, internal, 107739, 107852
-recovered pasa_asmbl_688.p2, internal, 107950, 108105
-recovered pasa_asmbl_688.p2, internal, 108237, 108359
-recovered pasa_asmbl_688.p2, internal, 108591, 108704
-recovered pasa_asmbl_688.p2, internal, 108830, 108958
-recovered pasa_asmbl_688.p2, internal, 109052, 109174
-recovered pasa_asmbl_688.p2, internal, 109472, 109612
-recovered pasa_asmbl_688.p2, internal, 109738, 109925
Valid prediction for GlimmerHMM_glimmerT_1614-T1
Valid prediction for snap_scaffold_1-snap.2082-T1
Valid prediction for Augustus_model.g1209.t1
Valid prediction for Augustus_model.g1199.t1
Valid prediction for snap_scaffold_1-snap.2099-T1
Valid prediction for snap_scaffold_1-snap.2117-T1
Valid prediction for GlimmerHMM_glimmerT_1622-T1
Valid prediction for snap_scaffold_1-snap.2084-T1
Valid prediction for GlimmerHMM_glimmerT_1620-T1
Valid prediction for Augustus_model.g1196.t1
Couldn't classify 152863, 152898
Sorry, prediction pasa_asmbl_687.p2 fails validation.
(CAT)	 GC	152863-152898	GT	AGG
(GAT)	 AG	152979-153053	GC	AGG
(AAG)	 AG	153146-153176	GT	AAG
(AAA)	 AG	153454-153541	GT	AAG
(GAT)	 AG	153655-153730	TA	AAT
add_exon() Sorry, pasa_asmbl_687.p2 153454-153541-terminal-3 is invalid.
-recovered pasa_asmbl_687.p2, terminal, 153454, 153541
-recovered pasa_asmbl_687.p2, terminal, 153655, 153730
-recovered pasa_asmbl_687.p2, internal, 152979, 153053
-recovered pasa_asmbl_687.p2, internal, 153146, 153176
-recovered pasa_asmbl_687.p2, internal, 153454, 153541
Valid prediction for Augustus_model.g1195.t1
Valid prediction for snap_scaffold_1-snap.2116-T1
Valid prediction for snap_scaffold_1-snap.2085-T1
Valid prediction for GlimmerHMM_glimmerT_1600-T1
Valid prediction for snap_scaffold_1-snap.2096-T1
Valid prediction for snap_scaffold_1-snap.2091-T1
Couldn't classify 8769, 9099
Sorry, prediction pasa_asmbl_693.p1 fails validation.
(TCT)	 GT	8769-9099	GT	AAG
(AGA)	 AG	9220-9308	GT	AGG
(GGC)	 AG	9423-9567	GT	TGG
(CTG)	 AG	10884-11404	GT	TGG
(GCG)	 AG	11535-11720	GT	AGG
(GTT)	 AG	11830-12040	GT	CGG
(ACC)	 AG	12154-12350	AA	GAA
-recovered pasa_asmbl_693.p1, terminal, 12154, 12350
-recovered pasa_asmbl_693.p1, internal, 9220, 9308
-recovered pasa_asmbl_693.p1, internal, 9423, 9567
-recovered pasa_asmbl_693.p1, internal, 10884, 11404
-recovered pasa_asmbl_693.p1, internal, 11535, 11720
-recovered pasa_asmbl_693.p1, internal, 11830, 12040
Valid prediction for Augustus_model.g1208.t1
Valid prediction for snap_scaffold_1-snap.2113-T1
Valid prediction for GlimmerHMM_glimmerT_1603-T1
Valid prediction for GlimmerHMM_glimmerT_1604-T1
Valid prediction for snap_scaffold_1-snap.2090-T1
Valid prediction for snap_scaffold_1-snap.2089-T1
Valid prediction for snap_scaffold_1-snap.2094-T1
Couldn't classify 97831, 97966
Couldn't classify 99868, 99972
Sorry, prediction pasa_asmbl_691.p1 fails validation.
(AAG)	 AC	97831-97966	GT	AGG
(GCT)	 AG	98089-98214	GT	GGG
(GTG)	 AG	98309-98440	GT	AGG
(ACA)	 AG	98560-98694	GT	AGG
(GCA)	 AG	99365-99494	GT	GGG
(GTA)	 AG	99625-99751	GT	AGG
(GAG)	 AG	99868-99972	AT	ACA
-recovered pasa_asmbl_691.p1, internal, 98089, 98214
-recovered pasa_asmbl_691.p1, internal, 98309, 98440
-recovered pasa_asmbl_691.p1, internal, 98560, 98694
-recovered pasa_asmbl_691.p1, internal, 99365, 99494
-recovered pasa_asmbl_691.p1, internal, 99625, 99751
Valid prediction for snap_scaffold_1-snap.2095-T1
Valid prediction for GlimmerHMM_glimmerT_1625-T1
Valid prediction for GlimmerHMM_glimmerT_1618-T1
Couldn't classify 84259, 84349
Couldn't classify 85505, 85593
Sorry, prediction pasa_asmbl_692.p1 fails validation.
(TGT)	 CA	84259-84349	GT	CCG
(ACC)	 AG	85076-85201	GT	TGG
(CTC)	 AG	85505-85593	GA	GCG
-recovered pasa_asmbl_692.p1, internal, 85076, 85201
Valid prediction for GlimmerHMM_glimmerT_1606-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 8945, rend_intergenic: 6956  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 17885, rend_intergenic: 13137  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 38721, rend_intergenic: 31415  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 107775, rend_intergenic: 97390  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 132004, rend_intergenic: 120960  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 133090, rend_intergenic: 133002  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 146377, rend_intergenic: 134898  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 169739, rend_intergenic: 152060  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 172138, rend_intergenic: 171044  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 236542
-exon list size: 596


building trellis

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42.0    
42.1    
42.3    
42.5    
42.6    
42.8    
43.0    
43.1    
43.3    
43.5    
43.6    
43.8    
44.0    
44.1    
44.3    
44.5    
44.6    
44.8    
45.0    
45.2    
45.3    
45.5    
45.7    
45.8    
46.0    
46.2    
46.3    
46.5    
46.7    
46.8    
47.0    
47.2    
47.3    
47.5    
47.7    
47.8    
48.0    
48.2    
48.3    
48.5    
48.7    
48.8    
49.0    
49.2    
49.3    
49.5    
49.7    
49.8    
50.0    
50.2    
50.3    
50.5    
50.7    
50.8    
51.0    
51.2    
51.3    
51.5    
51.7    
51.8    
52.0    
52.2    
52.3    
52.5    
52.7    
52.8    
53.0    
53.2    
53.3    
53.5    
53.7    
53.8    
54.0    
54.2    
54.3    
54.5    
54.7    
54.8    
55.0    
55.2    
55.4    
55.5    
55.7    
55.9    
56.0    
56.2    
56.4    
56.5    
56.7    
56.9    
57.0    
57.2    
57.4    
57.5    
57.7    
57.9    
58.0    
58.2    
58.4    
58.5    
58.7    
58.9    
59.0    
59.2    
59.4    
59.5    
59.7    
59.9    
60.0    
60.2    
60.4    
60.5    
60.7    
60.9    
61.0    
61.2    
61.4    
61.5    
61.7    
61.9    
62.0    
62.2    
62.4    
62.5    
62.7    
62.9    
63.0    
63.2    
63.4    
63.5    
63.7    
63.9    
64.0    
64.2    
64.4    
64.5    
64.7    
64.9    
65.1    
65.2    
65.4    
65.6    
65.7    
65.9    
66.1    
66.2    
66.4    
66.6    
66.7    
66.9    
67.1    
67.2    
67.4    
67.6    
67.7    
67.9    
68.1    
68.2    
68.4    
68.6    
68.7    
68.9    
69.1    
69.2    
69.4    
69.6    
69.7    
69.9    
70.1    
70.2    
70.4    
70.6    
70.7    
70.9    
71.1    
71.2    
71.4    
71.6    
71.7    
71.9    
72.1    
72.2    
72.4    
72.6    
72.7    
72.9    
73.1    
73.2    
73.4    
73.6    
73.7    
73.9    
74.1    
74.2    
74.4    
74.6    
74.7    
74.9    
75.1    
75.3    
75.4    
75.6    
75.8    
75.9    
76.1    
76.3    
76.4    
76.6    
76.8    
76.9    
77.1    
77.3    
77.4    
77.6    
77.8    
77.9    
78.1    
78.3    
78.4    
78.6    
78.8    
78.9    
79.1    
79.3    
79.4    
79.6    
79.8    
79.9    
80.1    
80.3    
80.4    
80.6    
80.8    
80.9    
81.1    
81.3    
81.4    
81.6    
81.8    
81.9    
82.1    
82.3    
82.4    
82.6    
82.8    
82.9    
83.1    
83.3    
83.4    
83.6    
83.8    
83.9    
84.1    
84.3    
84.4    
84.6    
84.8    
84.9    
85.1    
85.3    
85.5    
85.6    
85.8    
86.0    
86.1    
86.3    
86.5    
86.6    
86.8    
87.0    
87.1    
87.3    
87.5    
87.6    
87.8    
88.0    
88.1    
88.3    
88.5    
88.6    
88.8    
89.0    
89.1    
89.3    
89.5    
89.6    
89.8    
90.0    
90.1    
90.3    
90.5    
90.6    
90.8    
91.0    
91.1    
91.3    
91.5    
91.6    
91.8    
92.0    
92.1    
92.3    
92.5    
92.6    
92.8    
93.0    
93.1    
93.3    
93.5    
93.6    
93.8    
94.0    
94.1    
94.3    
94.5    
94.6    
94.8    
95.0    
95.2    
95.3    
95.5    
95.7    
95.8    
96.0    
96.2    
96.3    
96.5    
96.7    
96.8    
97.0    
97.2    
97.3    
97.5    
97.7    
97.8    
98.0    
98.2    
98.3    
98.5    
98.7    
98.8    
99.0    
99.2    
99.3    
99.5    
99.7    
99.8    
-found 34 predictions from path traversal
Error with prediction: snap lend_intergenic: 8945, rend_intergenic: 6956  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 17885, rend_intergenic: 13137  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 38721, rend_intergenic: 31415  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 107775, rend_intergenic: 97390  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 132004, rend_intergenic: 120960  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 133090, rend_intergenic: 133002  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 146377, rend_intergenic: 134898  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 169739, rend_intergenic: 152060  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 172138, rend_intergenic: 171044  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 30 predictions persist after filtering for low support