Index of /pp/annotation~Funannotate/contents/gmes_linux_64
 Name                                 Last modified      Size  Description
 Name                                 Last modified      Size  Description
![[PARENTDIR]](/icons/back.gif) Parent Directory                                          -
 Parent Directory                                          -   
![[   ]](/icons/unknown.gif) wbp.cfg                              2022-10-23 12:18  136
 wbp.cfg                              2022-10-23 12:18  136   
![[   ]](/icons/p.gif) verify_evidence_gmhmm.pl             2024-05-09 11:27  4.6K
 verify_evidence_gmhmm.pl             2024-05-09 11:27  4.6K  
![[DIR]](/icons/folder.gif) statistics/                          2022-10-23 12:18    -
 statistics/                          2022-10-23 12:18    -   
![[   ]](/icons/p.gif) star_to_gff.pl                       2024-05-09 11:27  5.4K
 star_to_gff.pl                       2024-05-09 11:27  5.4K  
![[TXT]](/icons/text.gif) selectSupportedSubsets.py            2022-10-23 12:18  2.2K
 selectSupportedSubsets.py            2022-10-23 12:18  2.2K  
![[   ]](/icons/p.gif) scan_for_bp.pl                       2024-05-09 11:27  3.9K
 scan_for_bp.pl                       2024-05-09 11:27  3.9K  
![[   ]](/icons/p.gif) run_hmm_pbs.pl                       2024-05-09 11:27  6.0K
 run_hmm_pbs.pl                       2024-05-09 11:27  6.0K  
![[   ]](/icons/p.gif) run_es.pl                            2024-05-09 11:27  3.1K
 run_es.pl                            2024-05-09 11:27  3.1K  
![[   ]](/icons/p.gif) rnaseq_introns_to_gff.pl             2024-05-09 11:27  3.7K
 rnaseq_introns_to_gff.pl             2024-05-09 11:27  3.7K  
![[   ]](/icons/p.gif) rescale_gff.pl                       2024-05-09 11:27  4.1K
 rescale_gff.pl                       2024-05-09 11:27  4.1K  
![[   ]](/icons/p.gif) reformat_gff.pl                      2024-05-09 11:27  4.1K
 reformat_gff.pl                      2024-05-09 11:27  4.1K  
![[   ]](/icons/unknown.gif) probuild                             2022-10-23 12:18  1.9M
 probuild                             2022-10-23 12:18  1.9M  
![[   ]](/icons/unknown.gif) prior.bp                             2022-10-23 12:18  116
 prior.bp                             2022-10-23 12:18  116   
![[TXT]](/icons/text.gif) predictionAnalysis.py                2022-10-23 12:18   10K
 predictionAnalysis.py                2022-10-23 12:18   10K  
![[   ]](/icons/p.gif) predict_genes.pl                     2024-05-09 11:27  8.5K
 predict_genes.pl                     2024-05-09 11:27  8.5K  
![[   ]](/icons/p.gif) parse_set.pl                         2024-05-09 11:27   21K
 parse_set.pl                         2024-05-09 11:27   21K  
![[   ]](/icons/p.gif) parse_gibbs.pl                       2024-05-09 11:27  7.9K
 parse_gibbs.pl                       2024-05-09 11:27  7.9K  
![[   ]](/icons/p.gif) parse_by_introns.pl                  2024-05-09 11:27   15K
 parse_by_introns.pl                  2024-05-09 11:27   15K  
![[   ]](/icons/p.gif) parse_ET.pl                          2024-05-09 11:27   27K
 parse_ET.pl                          2024-05-09 11:27   27K  
![[DIR]](/icons/folder.gif) other/                               2022-10-23 12:18    -
 other/                               2022-10-23 12:18    -   
![[   ]](/icons/p.gif) make_nt_freq_mat.pl                  2024-05-09 11:27   18K
 make_nt_freq_mat.pl                  2024-05-09 11:27   18K  
![[DIR]](/icons/folder.gif) lib/                                 2022-10-23 12:18    -
 lib/                                 2022-10-23 12:18    -   
![[   ]](/icons/p.gif) histogram.pl                         2024-05-09 11:27   16K
 histogram.pl                         2024-05-09 11:27   16K  
![[DIR]](/icons/folder.gif) heu_dir/                             2022-10-23 12:18    -
 heu_dir/                             2022-10-23 12:18    -   
![[   ]](/icons/p.gif) hc_exons2hints.pl                    2024-05-09 11:27  590
 hc_exons2hints.pl                    2024-05-09 11:27  590   
![[   ]](/icons/unknown.gif) gmhmme3                              2022-10-23 12:18  1.7M
 gmhmme3                              2022-10-23 12:18  1.7M  
![[   ]](/icons/p.gif) gmes_petap.pl                        2024-05-09 11:27   83K
 gmes_petap.pl                        2024-05-09 11:27   83K  
![[   ]](/icons/unknown.gif) gmes.cfg                             2022-10-23 12:18   19K
 gmes.cfg                             2022-10-23 12:18   19K  
![[   ]](/icons/p.gif) get_sequence_from_GTF.pl             2024-05-09 11:27  8.7K
 get_sequence_from_GTF.pl             2024-05-09 11:27  8.7K  
![[   ]](/icons/p.gif) get_below_gc.pl                      2024-05-09 11:27  504
 get_below_gc.pl                      2024-05-09 11:27  504   
![[TXT]](/icons/text.gif) generateReport.py                    2022-10-23 12:18  8.0K
 generateReport.py                    2022-10-23 12:18  8.0K  
![[   ]](/icons/p.gif) gc_distr.pl                          2024-05-09 11:27  5.2K
 gc_distr.pl                          2024-05-09 11:27  5.2K  
![[   ]](/icons/p.gif) flag_anchored_elements.py            2022-10-23 12:18  4.8K
 flag_anchored_elements.py            2022-10-23 12:18  4.8K  
![[   ]](/icons/script.gif) filter_gff.sh                        2022-10-23 12:18  1.0K
 filter_gff.sh                        2022-10-23 12:18  1.0K  
![[TXT]](/icons/text.gif) countFullySupportedTranscripts.py    2022-10-23 12:18  1.5K
 countFullySupportedTranscripts.py    2022-10-23 12:18  1.5K  
![[   ]](/icons/p.gif) compare_intervals_exact.pl           2024-05-09 11:27   28K
 compare_intervals_exact.pl           2024-05-09 11:27   28K  
![[TXT]](/icons/text.gif) check_install.bash                   2022-10-23 12:18  1.6K
 check_install.bash                   2022-10-23 12:18  1.6K  
![[   ]](/icons/p.gif) change_path_in_perl_scripts.pl       2024-05-09 11:27  1.5K
 change_path_in_perl_scripts.pl       2024-05-09 11:27  1.5K  
![[   ]](/icons/p.gif) calc_introns_from_gtf.pl             2024-05-09 11:27  5.1K
 calc_introns_from_gtf.pl             2024-05-09 11:27  5.1K  
![[   ]](/icons/p.gif) build_mod.pl                         2024-05-09 11:27   23K
 build_mod.pl                         2024-05-09 11:27   23K  
![[   ]](/icons/p.gif) bp_seq_select.pl                     2024-05-09 11:27  5.6K
 bp_seq_select.pl                     2024-05-09 11:27  5.6K  
![[   ]](/icons/p.gif) bed_to_gff.pl                        2024-05-09 11:27  4.3K
 bed_to_gff.pl                        2024-05-09 11:27  4.3K  
![[DIR]](/icons/folder.gif) ProtHint/                            2022-10-23 12:18    -
 ProtHint/                            2022-10-23 12:18    -   
![[TXT]](/icons/text.gif) LICENSE                              2022-10-23 12:18  2.5K
 LICENSE                              2022-10-23 12:18  2.5K  
![[TXT]](/icons/text.gif) INSTALL                              2022-10-23 12:18  1.9K
 INSTALL                              2022-10-23 12:18  1.9K  
![[   ]](/icons/unknown.gif) Gibbs3                               2022-10-23 12:21  1.7M
 Gibbs3                               2022-10-23 12:21  1.7M  
![[DIR]](/icons/folder.gif) GeneMark-E-tests/                    2022-10-23 12:18    -
 GeneMark-E-tests/                    2022-10-23 12:18    -