Index of /pp/annotation~Funannotate/contents/fun/training/pasa/Plecoglossus_altivelis_pasa.assemblies.fasta.transdecoder_dir

Icon  Name                                                          Last modified      Size  Description
[PARENTDIR] Parent Directory                                                                   -   
[   ] base_freqs.dat                                                2024-05-10 00:38   68   
[   ] longest_orfs.cds                                              2024-05-10 00:40   51M  
[   ] longest_orfs.gff3                                             2024-05-10 00:40   41M  
[   ] longest_orfs.pep                                              2024-05-10 00:40   21M  
[   ] longest_orfs.cds.top_longest_5000                             2024-05-10 00:40   11M  
[   ] longest_orfs.cds.top_longest_5000.nr                          2024-05-10 00:40  6.4M  
[   ] longest_orfs.cds.top_500_longest                              2024-05-10 00:40  1.7M  
[   ] hexamer.scores                                                2024-05-10 00:40  531K  
[   ] longest_orfs.cds.scores                                       2024-05-10 00:44  3.9M  
[   ] longest_orfs.cds.best_candidates.gff3                         2024-05-10 00:45   20M  
[   ] start_refinement.+.features                                   2024-05-10 00:45  8.9K  
[   ] start_refinement.+.pwm                                        2024-05-10 00:45  1.3K  
[   ] start_refinement.-.features                                   2024-05-10 00:45  524K  
[   ] start_refinement.-.pwm                                        2024-05-10 00:45  1.3K  
[   ] start_refinement.feature.scores                               2024-05-10 00:45   15M  
[   ] start_refinement.feature.scores.roc                           2024-05-10 00:45   99K  
[   ] start_refinement.feature.scores.roc.plot.pdf                  2024-05-10 00:45   19K  
[   ] start_refinement.feature.scores.roc.auc                       2024-05-10 00:45  2.8K  
[   ] start_refinement.feature.scores.roc.auc.plot.Rscript          2024-05-10 00:45  791   
[   ] start_refinement.feature.scores.roc.auc.plot.pdf              2024-05-10 00:45   14K  
[   ] start_refinement.+.pwm.seqLogo.pdf                            2024-05-10 00:45  170K  
[   ] start_refinement.-.pwm.seqLogo.pdf                            2024-05-10 00:45  142K  
[   ] start_refinement.enhanced.+.features                          2024-05-10 00:45  2.0K  
[   ] start_refinement.enhanced.+.pwm                               2024-05-10 00:45  1.3K  
[   ] start_refinement.enhanced.feature.scores                      2024-05-10 00:46   15M  
[   ] start_refinement.enhanced.feature.scores.roc                  2024-05-10 00:46  111K  
[   ] start_refinement.enhanced.feature.scores.roc.plot.pdf         2024-05-10 00:46   17K  
[   ] start_refinement.enhanced.feature.scores.roc.auc              2024-05-10 00:46  3.4K  
[   ] start_refinement.enhanced.feature.scores.roc.auc.plot.Rscript 2024-05-10 00:46  809   
[   ] start_refinement.enhanced.feature.scores.roc.auc.plot.pdf     2024-05-10 00:46   14K  
[   ] start_refinement.enhanced.+.pwm.seqLogo.pdf                   2024-05-10 00:46  203K  
[DIR] start_refinement_1715269506_checkpoints/                      2024-05-10 00:46    -   
[   ] start_refinement.alt_start_scores                             2024-05-10 00:46  614K  
[   ] longest_orfs.cds.best_candidates.gff3.revised_starts.gff3     2024-05-10 00:46   20M