seqclean running options: seqclean trinity.fasta -c 16 Standard log file: seqcl_trinity.fasta.log Error log file: err_seqcl_trinity.fasta.log Using 16 CPUs for cleaning -= Rebuilding trinity.fasta cdb index =- 60037 entries from file trinity.fasta were indexed in file trinity.fasta.cidx Launching actual cleaning process: psx -p 16 -n 1000 -i trinity.fasta -d cleaning -C '/trinity.fasta:ANLMS100:::11:0' -c '/venv/opt/pasa-2.4.1/bin/seqclean.psx' WAITING for all children to finish before starting last child! WAITING for all children to finish! Collecting cleaning reports ************************************************** Sequences analyzed: 60037 ----------------------------------- valid: 59997 (681 trimmed) trashed: 40 ************************************************** ----= Trashing summary =------ by 'dust': 40 ------------------------------ Output file containing only valid and trimmed sequences: trinity.fasta.clean For trimming and trashing details see cleaning report : trinity.fasta.cln --------------------------------------------------