-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_968

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GeneMark_model.108688_t
Couldn't classify 1270, 1363
Couldn't classify 2596, 2636
Sorry, prediction snap_scaffold_968-snap.1-T1 fails validation.
(TCC)	 AG	1270-1363	GT	AGG
(GTT)	 AG	1826-1996	GT	GGG
(AGT)	 AG	2069-2110	GT	CGG
(CAC)	 AG	2596-2636	GT	TGG
-recovered snap_scaffold_968-snap.1-T1, internal, 1270, 1363
-recovered snap_scaffold_968-snap.1-T1, internal, 1826, 1996
-recovered snap_scaffold_968-snap.1-T1, internal, 2069, 2110
-recovered snap_scaffold_968-snap.1-T1, internal, 2596, 2636

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GlimmerHMM_glimmerT_62373-T1
Valid prediction for GeneMark_model.108687_t

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 3772
-exon list size: 16


building trellis

5.6    
11.1    
16.7    
22.2    
27.8    
33.3    
38.9    
44.4    
50.0    
55.6    
61.1    
66.7    
72.2    
77.8    
83.3    
88.9    
94.4    
-found 1 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 1 predictions persist after filtering for low support